Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0111
         (454 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter...    26   0.17 
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    25   0.29 
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    21   6.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    21   6.3  
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.             21   6.3  
DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization prot...    21   8.3  
AF388659-2|AAK71994.1|  463|Apis mellifera 1D-myo-inositol-trisp...    21   8.3  

>AF144379-1|AAD34586.1|  543|Apis mellifera glutamate transporter
           Am-EAAT protein.
          Length = 543

 Score = 26.2 bits (55), Expect = 0.17
 Identities = 10/19 (52%), Positives = 13/19 (68%)
 Frame = -1

Query: 169 TYLGTPLGSLTTPVTFRCV 113
           T LGT   + T P+TFRC+
Sbjct: 356 TALGTASSAATLPITFRCL 374


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 25.4 bits (53), Expect = 0.29
 Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 4/35 (11%)
 Frame = -1

Query: 355 TPGSGS-LSCAASTVKLY---HLSESGGAATRCHA 263
           T GS + L C  +  K     HLS SGGA   CHA
Sbjct: 285 TKGSDAELICVTTGTKCVSGEHLSVSGGALNDCHA 319


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 135 VVKDPNGVPRYVLQGHWDSRVEV 203
           +V  P  +   +L GH+DS V+V
Sbjct: 754 IVGTPVHMAPELLSGHYDSSVDV 776


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = +3

Query: 135 VVKDPNGVPRYVLQGHWDSRVEV 203
           +V  P  +   +L GH+DS V+V
Sbjct: 792 IVGTPVHMAPELLSGHYDSSVDV 814


>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
          Length = 1598

 Score = 21.0 bits (42), Expect = 6.3
 Identities = 13/45 (28%), Positives = 18/45 (40%)
 Frame = -3

Query: 377 QPRVGGRDAGLGLVELRGEHGEVVPLVGVGRGGHALPRRHELAGL 243
           +PR+ G  A +    +       VP+VG G G  A       A L
Sbjct: 556 KPRMSGPVAAVAAAAVAAAGVGGVPVVGAGGGRRAYTEEELQAAL 600


>DQ666693-1|ABG29167.1|  250|Apis mellifera MAX dimerization protein
           protein.
          Length = 250

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 9/21 (42%), Positives = 12/21 (57%)
 Frame = +1

Query: 52  ARLLGTSRTSSTCPTGTSAKT 114
           A LL   R+ S C  GT++ T
Sbjct: 164 AALLSKRRSVSECSLGTASST 184


>AF388659-2|AAK71994.1|  463|Apis mellifera
          1D-myo-inositol-trisphosphate 3-kinaseisoform B
          protein.
          Length = 463

 Score = 20.6 bits (41), Expect = 8.3
 Identities = 8/13 (61%), Positives = 10/13 (76%)
 Frame = -1

Query: 52 PASPTMSXSPWLS 14
          PASPT+S  P L+
Sbjct: 26 PASPTLSTPPTLN 38


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 91,001
Number of Sequences: 438
Number of extensions: 1795
Number of successful extensions: 7
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 11943513
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)