Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0110
(484 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6 pr... 101 2e-21
D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein TAXRE... 100 2e-21
BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6 pr... 100 2e-21
AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein TAX... 91 2e-18
X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6 prot... 82 9e-16
S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140 pro... 82 1e-15
>BC022444-1|AAH22444.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 101 bits (241), Expect = 2e-21
Identities = 60/160 (37%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L GV R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGVGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>D17554-1|BAA04491.1| 288|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC104826-1|AAI04827.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC104824-1|AAI04825.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC071912-1|AAH71912.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC032299-1|AAH32299.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC031009-1|AAH31009.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCGRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC020679-1|AAH20679.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>BC004138-1|AAH04138.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>AB042820-1|BAB17292.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 100 bits (240), Expect = 2e-21
Identities = 59/160 (36%), Positives = 81/160 (50%), Gaps = 9/160 (5%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKRXXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GRH GKR P N PLRR ++V
Sbjct: 155 GRHRGKRVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 194
>AF261087-1|AAF99680.1| 289|Homo sapiens DNA-binding protein
TAXREB107 protein.
Length = 289
Score = 91.1 bits (216), Expect = 2e-18
Identities = 57/161 (35%), Positives = 79/161 (49%), Gaps = 10/161 (6%)
Frame = +1
Query: 31 KKKSTKKP---RNYDLGNGVMRFSKSKMFHKKA----KYKFIGXXXXXXXXXXXLTVVVK 189
KK KP RN L G+ R+S+S M+ +KA KY L V K
Sbjct: 35 KKPKKGKPHCSRNPVLVRGIGRYSRSAMYSRKAMYKRKYSAAKSKVEKKKKEKVLATVTK 94
Query: 190 QIGGEKNGGTRTVPLKRRKSFYPTQEKIR--ASSGGRPFSKHVRRIRPNLKIGTVCILLA 363
+GG+KNGGTR V L++ +YPT++ R S G +PFS+HVR++R ++ GT+ I+L
Sbjct: 95 PVGGDKNGGTRVVKLRKMPRYYPTEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILT 154
Query: 364 GRHAGKR-XXXXXXXXXXXXXXXXPFAFNSCPLRRIPXRYV 483
GR GK P N PLRR ++V
Sbjct: 155 GRRRGKNWVVFLKQLASGLLLVTGPLVLNRVPLRRTHQKFV 195
>X69391-1|CAA49188.1| 288|Homo sapiens ribosomal protein L6
protein.
Length = 288
Score = 82.2 bits (194), Expect = 9e-16
Identities = 46/137 (33%), Positives = 68/137 (49%), Gaps = 2/137 (1%)
Frame = +1
Query: 79 VMRFSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYP 258
+ S+ M+ K KY L V K +GG+KNGGTR V L++ +YP
Sbjct: 60 ICHVSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYP 117
Query: 259 TQEKIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKRXXXXXXXXXXXXXXXX 432
T++ R S G +PFS+HVR++R ++ GT+ I+L GRH GKR
Sbjct: 118 TEDVPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKRVVFLKQLASGLLLVTD 177
Query: 433 PFAFNSCPLRRIPXRYV 483
++ PLRR ++V
Sbjct: 178 LWSSIEVPLRRTHQKFV 194
>S71022-1|AAB30819.1| 207|Homo sapiens neoplasm-related C140
product protein.
Length = 207
Score = 81.8 bits (193), Expect = 1e-15
Identities = 41/101 (40%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Frame = +1
Query: 88 FSKSKMFHKKAKYKFIGXXXXXXXXXXXLTVVVKQIGGEKNGGTRTVPLKRRKSFYPTQE 267
+S+ M+ K KY L V K +GG+KNGGTR V L++ +YPT++
Sbjct: 2 YSRKAMY--KRKYSAAKSKVEKKKKEKVLATVTKPVGGDKNGGTRVVKLRKMPRYYPTED 59
Query: 268 KIRA--SSGGRPFSKHVRRIRPNLKIGTVCILLAGRHAGKR 384
R S G +PFS+HVR++R ++ GT+ I+L GRH GKR
Sbjct: 60 VPRKLLSHGKKPFSQHVRKLRASITPGTILIILTGRHRGKR 100
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,061,773
Number of Sequences: 237096
Number of extensions: 1377353
Number of successful extensions: 2705
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 2631
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4327667848
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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