Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0109
(674 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.) 66 2e-11
SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.) 65 6e-11
SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.) 64 1e-10
SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.) 52 3e-07
SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012) 46 2e-05
SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021) 39 0.004
SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.) 38 0.006
SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3) 35 0.052
SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40) 31 0.64
SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10) 31 0.64
SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0) 31 0.64
SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.64
SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053) 30 1.5
SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30) 29 2.6
SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.5
SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.0
SB_57416| Best HMM Match : rve (HMM E-Value=0.0011) 28 7.9
SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 7.9
>SB_27133| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 304
Score = 66.5 bits (155), Expect = 2e-11
Identities = 39/107 (36%), Positives = 54/107 (50%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKL 500
+ KQI E+ AS Y++M +F D V PGF K F +A+ EEREHA KL + L G
Sbjct: 150 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFMEASHEEREHAEKLAKFQLQRG-- 207
Query: 501 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCE 641
G + L + P W G ++ AL LE V ++ + K E
Sbjct: 208 -GRIV-LQDIKRPERDDWGCGQDVIQAALDLEKHVNQALHDLHKVAE 252
>SB_27134| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 289
Score = 66.1 bits (154), Expect = 2e-11
Identities = 40/107 (37%), Positives = 54/107 (50%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKL 500
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L G
Sbjct: 135 VNKQINLELYASYVYMSMAYHFDRDDVALPGFHKYFMKASHEEREHAEKLAKFQLQRG-- 192
Query: 501 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCE 641
G + L + P W G A++ AL LE V ++ + K E
Sbjct: 193 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQALLDLHKVAE 237
>SB_21296| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 358
Score = 64.9 bits (151), Expect = 6e-11
Identities = 42/124 (33%), Positives = 60/124 (48%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 482
+ C + KQI E+ AS YL+M +F D V PGF K F A+ EEREHA KL+ +
Sbjct: 197 EECEAGINKQINLELYASYAYLSMAFHFDRDDVALPGFHKYFLKASHEEREHAEKLMKFQ 256
Query: 483 LMXGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCESSFNDYH 662
G G + L + P W G +++ AL LE V ++ + K E D
Sbjct: 257 NERG---GRIV-LQDIKKPEKDEWGCGMDSIQVALDLEKHVNQALLDLHKIAE-KHGDAQ 311
Query: 663 LVDY 674
+ D+
Sbjct: 312 MTDF 315
Score = 44.4 bits (100), Expect = 9e-05
Identities = 27/80 (33%), Positives = 40/80 (50%)
Frame = +3
Query: 378 AYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLITYRAPANTSWE 557
A+F D ++ PGFA F AA EE HA +++L K G V L P W
Sbjct: 2 AHFGRDDIHLPGFAAFFKKAAEEEYTHAHMFMEFL---NKRGGRV-KLHHIMKPCRDHWG 57
Query: 558 SGASALEHALKLESDVTNSI 617
+G A+ AL LE ++ +++
Sbjct: 58 NGLMAMRDALYLEKEINHAL 77
>SB_7534| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 63.7 bits (148), Expect = 1e-10
Identities = 40/109 (36%), Positives = 54/109 (49%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKL 500
+ KQI E+ AS Y++M +F D V PGF K F A+ EEREHA KL + L G
Sbjct: 18 VNKQINLELYASYVYMSMAFHFDRDDVALPGFHKYFIKASHEEREHAEKLAKFQLQRG-- 75
Query: 501 TGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCESS 647
G + L + P W G A++ AL LE+ T K+ S+
Sbjct: 76 -GRIV-LQDIKRPERDDWGCGQDAIQAALDLENTSTRPYMICTKSPRST 122
>SB_29575| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 394
Score = 52.4 bits (120), Expect = 3e-07
Identities = 40/124 (32%), Positives = 54/124 (43%)
Frame = +3
Query: 303 QTCYNMMRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYL 482
+ C + KQI E+ AS Y +M YF + V+ PGF K F A EEREHA K
Sbjct: 10 EECEAGINKQINLELYASYVYTSMACYFDREDVHLPGFHKFFKKQAHEEREHAEK----- 64
Query: 483 LMXGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCESSFNDYH 662
P W SG A++ AL LE V ++ + KT E + D
Sbjct: 65 -----------------KPERDEWGSGLEAMQTALDLEKHVNQALIELEKTAEKN-GDAQ 106
Query: 663 LVDY 674
+ D+
Sbjct: 107 MSDF 110
>SB_58496| Best HMM Match : Ferritin (HMM E-Value=0.0012)
Length = 126
Score = 46.4 bits (105), Expect = 2e-05
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +3
Query: 321 MRKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHA 461
+ KQI +E+ A YL+M +F D +N PGF K F A+ EE EHA
Sbjct: 38 INKQINKELYAHYTYLSMAFHFDRDDINLPGFNKFFKKASKEEWEHA 84
>SB_46811| Best HMM Match : Ferritin (HMM E-Value=0.0021)
Length = 73
Score = 38.7 bits (86), Expect = 0.004
Identities = 24/69 (34%), Positives = 33/69 (47%)
Frame = +3
Query: 435 AATEEREHATKLIDYLLMXGKLTGSVTDLITYRAPANTSWESGASALEHALKLESDVTNS 614
A+ EEREHA KL + L G G + L + P W G A++ AL LE V +
Sbjct: 3 ASHEEREHAEKLAKFQLQRG---GRIV-LQDIKRPERDDWGCGQDAIQAALDLEKHVNQA 58
Query: 615 IRXVIKTCE 641
+ + K E
Sbjct: 59 LHDLHKVAE 67
>SB_7503| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 203
Score = 38.3 bits (85), Expect = 0.006
Identities = 36/114 (31%), Positives = 51/114 (44%), Gaps = 18/114 (15%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHA---------TK-----LIDYLL--MXGKLT--G 506
+F D +N PGF K F A+ EE EHA TK I +LL LT G
Sbjct: 32 HFDRDDINLPGFNKFFKKASKEEWEHAQMVKTAALQTKCYRKLTIVWLLFQFMAYLTKRG 91
Query: 507 SVTDLITYRAPANTSWESGASALEHALKLESDVTNSIRXVIKTCESSFNDYHLV 668
L P W +G A+E AL LE ++ +S++ + + + ND +V
Sbjct: 92 GRVKLNDIPTPCRDQWGNGLMAMEDALALEKEILSSLQALHRKAQEE-NDAQIV 144
>SB_44028| Best HMM Match : RVT_1 (HMM E-Value=1.3)
Length = 249
Score = 35.1 bits (77), Expect = 0.052
Identities = 17/48 (35%), Positives = 29/48 (60%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L YLL T S+T ++
Sbjct: 30 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKYLLHGPDCTNSLTGVL 75
>SB_56909| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1379
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 350 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 395
>SB_30861| Best HMM Match : Peptidase_A17 (HMM E-Value=2.1e-40)
Length = 1740
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 868 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 913
>SB_25615| Best HMM Match : Peptidase_A17 (HMM E-Value=4.5e-10)
Length = 475
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 151 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 196
>SB_5393| Best HMM Match : Peptidase_A17 (HMM E-Value=0)
Length = 1244
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 667 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 712
>SB_616| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1515
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/48 (33%), Positives = 28/48 (58%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLTGSVTDLI 524
+F++ +N+PG ++ FDAA+E + T L LL T S+T ++
Sbjct: 945 HFAVTNINKPGKLRIIFDAASEYQ--GTSLNKNLLHGPDCTNSLTGVL 990
>SB_19195| Best HMM Match : LEA_4 (HMM E-Value=0.00053)
Length = 1152
Score = 30.3 bits (65), Expect = 1.5
Identities = 16/27 (59%), Positives = 17/27 (62%)
Frame = +2
Query: 269 RHHQG*VAHHGADLLQHDEETDPGGSG 349
RHHQ AHHG L+HD E D GSG
Sbjct: 811 RHHQH-GAHHG---LKHDTENDASGSG 833
>SB_56522| Best HMM Match : Pox_A_type_inc (HMM E-Value=1.6e-30)
Length = 3071
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/35 (42%), Positives = 21/35 (60%)
Frame = +3
Query: 555 ESGASALEHALKLESDVTNSIRXVIKTCESSFNDY 659
ES A+ LEH L+ E++ N +R T SS N+Y
Sbjct: 1823 ESKAADLEHRLETEANDKNKLRQENITLASSLNEY 1857
>SB_36849| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 634
Score = 28.7 bits (61), Expect = 4.5
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = -1
Query: 317 VVASLLHGEPLIPDGDGADVTLCSCGRX*GSNESEDSKENSPH 189
V+A LL G+P+ P G D L + G+ E KE +PH
Sbjct: 252 VLAELLLGQPIFPGDSGVD-QLVEIIKVLGTPTREQIKEMNPH 293
>SB_10126| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 523
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/34 (35%), Positives = 17/34 (50%)
Frame = -1
Query: 545 VGGGPVRDEVGYGACQLAXHEQVVNELGRVLAFF 444
VG E GY AC +A + Q +N + +L F
Sbjct: 142 VGWSSYGPEPGYAACSIAWYRQDLNNMSYILCLF 175
>SB_53292| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 659
Score = 28.3 bits (60), Expect = 6.0
Identities = 20/99 (20%), Positives = 42/99 (42%)
Frame = +3
Query: 324 RKQIQEEVAASIQYLAMGAYFSIDTVNRPGFAKLFFDAATEEREHATKLIDYLLMXGKLT 503
RK +EE+ Q + N+PG ++ FDAA E + L LL +T
Sbjct: 39 RKLTEEELRTESQTTWFLPTHPVQNPNKPGKLRIVFDAAAEFQ--GISLNKALLSGPDVT 96
Query: 504 GSVTDLITYRAPANTSWESGASALEHALKLESDVTNSIR 620
++ ++ N + A+ H +++ + ++++
Sbjct: 97 NNLVAVLLQFCQGNIGIAADVEAMFHQIRVRKEDQDALQ 135
>SB_57416| Best HMM Match : rve (HMM E-Value=0.0011)
Length = 807
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 381 YFSIDTVNRPGFAKLFFDAATEEREHA 461
+F + + N+PG ++ FDAA + R ++
Sbjct: 138 HFGVTSANKPGCVRIVFDAAAKTRTNS 164
>SB_17318| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 261
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/27 (33%), Positives = 16/27 (59%)
Frame = +3
Query: 522 ITYRAPANTSWESGASALEHALKLESD 602
+TY + +W SG L H++K++ D
Sbjct: 164 VTYHCLNSAAWSSGKGDLNHSIKIKGD 190
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,464,632
Number of Sequences: 59808
Number of extensions: 338475
Number of successful extensions: 801
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 761
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1733301648
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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