Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0108
(572 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140... 79 1e-13
UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella ve... 69 6e-11
UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28; Eu... 62 7e-09
UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10; Eukaryo... 62 9e-09
UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep: Aa... 61 2e-08
UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep: LRRG0... 61 2e-08
UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDN... 51 2e-05
UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline recep... 50 3e-05
UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1; ... 35 1.6
UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia ... 35 1.6
UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole... 34 2.7
UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8; ... 33 3.6
UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8; ... 33 4.8
UniRef50_A1ICF6 Cluster: Integrase-recombinase protein; n=1; Can... 32 8.3
>UniRef50_Q6CQE6 Cluster: Kluyveromyces lactis strain NRRL Y-1140
chromosome D of strain NRRL Y- 1140 of Kluyveromyces
lactis; n=2; Kluyveromyces lactis|Rep: Kluyveromyces
lactis strain NRRL Y-1140 chromosome D of strain NRRL Y-
1140 of Kluyveromyces lactis - Kluyveromyces lactis
(Yeast) (Candida sphaerica)
Length = 144
Score = 78.6 bits (185), Expect = 1e-13
Identities = 45/89 (50%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Frame = -3
Query: 426 QTRHAPVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVRTG-ATSPRTSLT*I 250
Q H P+LRANPY EVTD CRLPL TLFY+LEA+HLGDLLR+ VR G T P +
Sbjct: 58 QGPHCPILRANPYPEVTDLFCRLPLSTLFYQLEAVHLGDLLRLSVRPGMKTIPSCGFS-- 115
Query: 249 FKVRREYPDTAANAVLFAFRTISPFYRIP 163
+ PD A + +T SP IP
Sbjct: 116 -RAVAGAPDPAQGLGSSSHKTPSPDKPIP 143
>UniRef50_A7SUM0 Cluster: Predicted protein; n=5; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 123
Score = 69.3 bits (162), Expect = 6e-11
Identities = 31/41 (75%), Positives = 34/41 (82%)
Frame = -3
Query: 411 PVLRANPYSEVTDPICRLPLPTLFYRLEALHLGDLLRIWVR 289
P LRANP+ EVTD CRLPLPTLFY+ EA HLGDLLR+ VR
Sbjct: 63 PTLRANPFPEVTDLFCRLPLPTLFYQPEAAHLGDLLRLLVR 103
>UniRef50_Q99JC0 Cluster: RRNA promoter binding protein; n=28;
Euteleostomi|Rep: RRNA promoter binding protein - Rattus
norvegicus (Rat)
Length = 295
Score = 62.5 bits (145), Expect = 7e-09
Identities = 41/114 (35%), Positives = 52/114 (45%)
Frame = -1
Query: 440 IRFPSKPDTPRSSEPILIPKLRIQFADFPYLHYSID*RLFTLETCCGYGYEPARHLHVHP 261
+R P++P P EPILIPKLRI+ ADFPYLH S L P P
Sbjct: 146 LRAPARPTQPL--EPILIPKLRIRLADFPYLHCSNMPEAVHLGDLLRIWVRPGARFTPSP 203
Query: 260 SPEFSRSAESIRTPPQMRCXSRSEPYLPSIGFHGTRTLRQKRKLFPDLSAASSG 99
P+F A + RTPP+ R R P G L ++++ P A SG
Sbjct: 204 -PDFQGPARAHRTPPEPRRFPRHGPLSRGEPIPGRPALHKEKRTLPGAPAGFSG 256
>UniRef50_O04892 Cluster: Cytochrome P450 like_TBP; n=10;
Eukaryota|Rep: Cytochrome P450 like_TBP - Nicotiana
tabacum (Common tobacco)
Length = 530
Score = 62.1 bits (144), Expect = 9e-09
Identities = 29/40 (72%), Positives = 31/40 (77%)
Frame = -2
Query: 406 PQSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGTN 287
PQSQS RSYGS LPTSL YI+ STRG SPWRP A +G N
Sbjct: 224 PQSQSFSRSYGSILPTSLAYIVPSTRGCSPWRPDAFVGGN 263
>UniRef50_Q7TP33 Cluster: Aa1-330; n=1; Rattus norvegicus|Rep:
Aa1-330 - Rattus norvegicus (Rat)
Length = 151
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/86 (41%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -1
Query: 329 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMR-CXSRSEPYLPSIGFHGTR 153
RLFTLETCCGYGY PAR L HP P + + + R + P L + F G
Sbjct: 25 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 82
Query: 152 TLRQKRKLFPDLSAASSGHFGLPRRT 75
+KR+L P L AS G LP T
Sbjct: 83 PFTKKRELSPGLPPASPGSVALPHWT 108
>UniRef50_Q6QI74 Cluster: LRRG00134; n=6; Euteleostomi|Rep:
LRRG00134 - Rattus norvegicus (Rat)
Length = 221
Score = 61.3 bits (142), Expect = 2e-08
Identities = 36/86 (41%), Positives = 43/86 (50%), Gaps = 1/86 (1%)
Frame = -1
Query: 329 RLFTLETCCGYGYEPARHLHVHPSPEFSRSAESIRTPPQMR-CXSRSEPYLPSIGFHGTR 153
RLFTLETCCGYGY PAR L HP P + + + R + P L + F G
Sbjct: 95 RLFTLETCCGYGYGPARDL--HPLPRIFKGQRELTGRRRNRDAFQGTGPSLGANPFQGAL 152
Query: 152 TLRQKRKLFPDLSAASSGHFGLPRRT 75
+KR+L P L AS G LP T
Sbjct: 153 PFTKKRELSPGLPPASPGSVALPHWT 178
Score = 34.3 bits (75), Expect = 2.1
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 1/58 (1%)
Frame = -2
Query: 385 RSYGSNLPTSLTYIILSTRGSSPWRPAADMGTN-RRDISTYIPHLNFQGPQRVSGHRR 215
+SYGS LPTSLTYI+ + + G RD+ +P + F+G + ++G RR
Sbjct: 76 KSYGSGLPTSLTYIVPTCQRLFTLETCCGYGYGPARDLHP-LPRI-FKGQRELTGRRR 131
>UniRef50_Q3U1V2 Cluster: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence; n=3;
Amniota|Rep: B6-derived CD11 +ve dendritic cells cDNA,
RIKEN full-length enriched library, clone:F730204M12
product:hypothetical protein, full insert sequence - Mus
musculus (Mouse)
Length = 136
Score = 51.2 bits (117), Expect = 2e-05
Identities = 35/86 (40%), Positives = 42/86 (48%), Gaps = 1/86 (1%)
Frame = +1
Query: 76 VRRGNPKWPEDAAERSGKSFLFCLSVRVPWNPIEGRYGSER-EXHRICGGVRILSADLEN 252
V+ GN P +A G+S LF + R PWN R G + R L+
Sbjct: 47 VQCGNATDPGEAGGSPGESSLFFVKGRAPWNGFAPREGPVPWKASRFRRRPVSSRWPLKI 106
Query: 253 SGEGCTWRCRAGSYPYPQQVSKVKSL 330
G GC + RAG YPYPQQVSKV SL
Sbjct: 107 RGRGC--KSRAGPYPYPQQVSKVNSL 130
>UniRef50_Q16984 Cluster: Alpha-L1 nicotinic acetyl choline
receptor; n=1; Acheta domesticus|Rep: Alpha-L1 nicotinic
acetyl choline receptor - Acheta domesticus (House
cricket)
Length = 39
Score = 50.4 bits (115), Expect = 3e-05
Identities = 21/24 (87%), Positives = 22/24 (91%)
Frame = -3
Query: 384 EVTDPICRLPLPTLFYRLEALHLG 313
EVTDPICRLPLPT YRL+ALHLG
Sbjct: 16 EVTDPICRLPLPTFVYRLDALHLG 39
>UniRef50_A6N073 Cluster: Putative uncharacterized protein; n=1;
Oryza sativa (indica cultivar-group)|Rep: Putative
uncharacterized protein - Oryza sativa subsp. indica
(Rice)
Length = 39
Score = 34.7 bits (76), Expect = 1.6
Identities = 17/23 (73%), Positives = 18/23 (78%)
Frame = +1
Query: 337 IE*CR*GKSANWIRNFGIRIGSE 405
+E CR GKSA IRNFG RIGSE
Sbjct: 1 MEQCRQGKSAKRIRNFGKRIGSE 23
>UniRef50_Q7QQI2 Cluster: GLP_748_1200_211; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_748_1200_211 - Giardia lamblia ATCC
50803
Length = 329
Score = 34.7 bits (76), Expect = 1.6
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = -2
Query: 403 QSQSLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMG 293
QS S R YG+ LPTSL+ + RG P PAA G
Sbjct: 290 QSHSFSRGYGAGLPTSLSRVRSRARGCWPRSPAAWWG 326
>UniRef50_Q4T8E7 Cluster: Chromosome undetermined SCAF7818, whole
genome shotgun sequence; n=2; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7818,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 563
Score = 33.9 bits (74), Expect = 2.7
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = -2
Query: 331 RGSSPWRPAADMGTNRRDISTYIPHLNFQGPQRVSGHRRKCGAXRVP 191
RG + RP + R ST H NF P SGH+ CGA +VP
Sbjct: 253 RGGAGPRPGGGLAAFSRSSSTSSDHGNFAMP---SGHQATCGALKVP 296
>UniRef50_Q8CM04 Cluster: Putative uncharacterized protein; n=8;
Bacteria|Rep: Putative uncharacterized protein -
Corynebacterium efficiens
Length = 261
Score = 33.5 bits (73), Expect = 3.6
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Frame = -1
Query: 413 PRSSEPILIPKLRIQFADFPYLHYSID*RL--FTLETCCGYGYEPARHL 273
P + L+PKLR FA+F L++S RL L TC G GY P H+
Sbjct: 95 PSPVQAPLLPKLRGHFAEF--LNHSSPERLSILYLTTCVGLGYGPNMHI 141
>UniRef50_A6BKX8 Cluster: Putative uncharacterized protein; n=8;
Clostridiales|Rep: Putative uncharacterized protein -
Dorea longicatena DSM 13814
Length = 109
Score = 33.1 bits (72), Expect = 4.8
Identities = 17/35 (48%), Positives = 21/35 (60%)
Frame = -2
Query: 394 SLFRSYGSNLPTSLTYIILSTRGSSPWRPAADMGT 290
S RSYG LP+SLT ++ S G SP P + GT
Sbjct: 13 SFSRSYGVILPSSLTMLLPSALGFSPHPPVSVYGT 47
>UniRef50_A1ICF6 Cluster: Integrase-recombinase protein; n=1;
Candidatus Desulfococcus oleovorans Hxd3|Rep:
Integrase-recombinase protein - Candidatus Desulfococcus
oleovorans Hxd3
Length = 219
Score = 32.3 bits (70), Expect = 8.3
Identities = 17/52 (32%), Positives = 27/52 (51%)
Frame = +1
Query: 10 FLFRXPGSGTVSIIVPSSLKTXVRRGNPKWPEDAAERSGKSFLFCLSVRVPW 165
F+ R G + ++ +P SLKT + + KW ++ ER G S + R PW
Sbjct: 92 FVSRGKGGRSRTVEIPQSLKTHLNQ-YLKWKKEQQERIGPSNYLFVGQRGPW 142
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 594,464,411
Number of Sequences: 1657284
Number of extensions: 12586592
Number of successful extensions: 37537
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 36076
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37517
length of database: 575,637,011
effective HSP length: 96
effective length of database: 416,537,747
effective search space used: 39154548218
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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