Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0108
(572 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein. 26 1.0
AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant r... 25 2.3
U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles ... 24 3.1
AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled ... 24 3.1
AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein... 24 3.1
AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ chann... 23 7.1
AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium ch... 23 7.1
U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic aci... 23 9.3
DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2 pro... 23 9.3
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel... 23 9.3
AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein. 23 9.3
>DQ974166-1|ABJ52806.1| 494|Anopheles gambiae serpin 6 protein.
Length = 494
Score = 25.8 bits (54), Expect = 1.0
Identities = 12/14 (85%), Positives = 13/14 (92%)
Frame = -2
Query: 133 NSSRTSRRRLQATL 92
NSSRT+ RRLQATL
Sbjct: 350 NSSRTAIRRLQATL 363
>AF364132-2|AAL35509.1| 411|Anopheles gambiae putative odorant
receptor Or3 protein.
Length = 411
Score = 24.6 bits (51), Expect = 2.3
Identities = 10/32 (31%), Positives = 19/32 (59%)
Frame = -1
Query: 443 RIRFPSKPDTPRSSEPILIPKLRIQFADFPYL 348
R+R + TP+ +++PKL+ + A P+L
Sbjct: 5 RLRLITSFGTPQDKRTMVLPKLKDETAVMPFL 36
>U50468-1|AAA93472.1| 91|Anopheles gambiae protein ( Anopheles
gambiae putativetubulin alpha chain mRNA, complete cds.
).
Length = 91
Score = 24.2 bits (50), Expect = 3.1
Identities = 9/24 (37%), Positives = 13/24 (54%)
Frame = +2
Query: 395 LALRTGACRVWTGSGCGRCRVWSM 466
+++ G V G+ C C VWSM
Sbjct: 5 ISVHVGQAGVQIGNPCWDCTVWSM 28
>AY301275-1|AAQ67361.1| 611|Anopheles gambiae G-protein coupled
receptor protein.
Length = 611
Score = 24.2 bits (50), Expect = 3.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 459 QTRHRPHPLPVQTRHAPVLRANPYSEVT 376
Q H PH Q +H P + P++ V+
Sbjct: 72 QLHHSPHQYHQQVQHQPQPPSTPFANVS 99
>AJ439353-2|CAD27924.1| 612|Anopheles gambiae putative G-protein
coupled receptor protein.
Length = 612
Score = 24.2 bits (50), Expect = 3.1
Identities = 9/28 (32%), Positives = 14/28 (50%)
Frame = -3
Query: 459 QTRHRPHPLPVQTRHAPVLRANPYSEVT 376
Q H PH Q +H P + P++ V+
Sbjct: 73 QLHHSPHQYHQQVQHQPQPPSTPFANVS 100
>AJ441131-5|CAD29634.1| 574|Anopheles gambiae putative Na+ channel
protein.
Length = 574
Score = 23.0 bits (47), Expect = 7.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>AJ439398-4|CAD28127.1| 572|Anopheles gambiae putative sodium
channel protein.
Length = 572
Score = 23.0 bits (47), Expect = 7.1
Identities = 14/40 (35%), Positives = 18/40 (45%)
Frame = -3
Query: 195 FRTISPFYRIPWNSNAQAEKKTLPGPLGGVFRPLWVTPSN 76
F T+ Y N+ A + T G G FRP+ TP N
Sbjct: 213 FNTLDTVYMFR-NATAPSIFPTEVGSSSGRFRPILWTPEN 251
>U03849-1|AAA53488.1| 388|Anopheles gambiae putative nucleic acid
binding protein protein.
Length = 388
Score = 22.6 bits (46), Expect = 9.3
Identities = 10/29 (34%), Positives = 14/29 (48%)
Frame = -1
Query: 521 LRPHYIKIXTR*NEHNARTSTRPGTGRIR 435
+R + + T HN + RP TGR R
Sbjct: 110 VRSGFTLLQTASTPHNRNSDPRPATGRKR 138
>DQ219483-1|ABB29887.1| 961|Anopheles gambiae cryptochrome 2
protein.
Length = 961
Score = 22.6 bits (46), Expect = 9.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -3
Query: 171 RIPWNSNAQAEKKTLPGPLG 112
+IPW+ NA+A K G G
Sbjct: 317 QIPWDRNAEALAKWASGQTG 336
>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative
cytoskeletal structural protein protein.
Length = 1645
Score = 22.6 bits (46), Expect = 9.3
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = -3
Query: 411 PVLRANPYSEVTDPICRLPLPTLFYR 334
P L S + P CRLP P L R
Sbjct: 89 PELVTRSLSNLELPSCRLPCPNLIPR 114
>AJ439353-11|CAD27933.1| 615|Anopheles gambiae 30E5.11 protein.
Length = 615
Score = 22.6 bits (46), Expect = 9.3
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 373 IRNFGIRIGSEDRGVSGLDGKRMRPVPG 456
I N I R VSGLD R P PG
Sbjct: 10 IGNLFIEPNRYRRIVSGLDSTRGSPAPG 37
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,984
Number of Sequences: 2352
Number of extensions: 12456
Number of successful extensions: 35
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54245403
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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