Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0108
         (572 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p pro...    31   1.1  
AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p pro...    31   1.1  
AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-P...    31   1.1  
AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-P...    31   1.1  
AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-P...    31   1.1  
BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p pro...    28   7.8  
AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-P...    28   7.8  

>BT010311-1|AAQ23629.1|  511|Drosophila melanogaster AT31519p
           protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 343 ILSTRGSSPWRPAADMGTNRRDISTYIP 260
           ++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343


>AY075453-1|AAL68266.1|  589|Drosophila melanogaster RE11411p
           protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 471 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 343
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE014134-2482|AAF53383.1|  511|Drosophila melanogaster CG15286-PA
           protein.
          Length = 511

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = -2

Query: 343 ILSTRGSSPWRPAADMGTNRRDISTYIP 260
           ++ TR ++P +PAA++G N R I+ Y P
Sbjct: 316 VIRTRHANPAQPAANIGNNTRSINVYGP 343


>AE013599-1106|AAM68760.2|  589|Drosophila melanogaster CG18377-PD,
           isoform D protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 471 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 343
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>AE013599-1105|AAF58791.3|  589|Drosophila melanogaster CG18377-PA,
           isoform A protein.
          Length = 589

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 16/43 (37%), Positives = 21/43 (48%)
 Frame = -3

Query: 471 TNIDQTRHRPHPLPVQTRHAPVLRANPYSEVTDPICRLPLPTL 343
           T++  TR     LP +T  +P     PYSEV  P    PLP +
Sbjct: 73  TSVATTRTTASSLPAETTSSPAAAVRPYSEVPGP---YPLPLI 112


>BT003261-1|AAO25018.1|  569|Drosophila melanogaster LD23656p
           protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 333 LEALHLGDLLRIWVRTGATSPRTS 262
           LE  HL  LLRIW+++ ++SP  S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFS 475


>AE013599-1893|AAF58247.1|  569|Drosophila melanogaster CG10105-PA
           protein.
          Length = 569

 Score = 28.3 bits (60), Expect = 7.8
 Identities = 12/24 (50%), Positives = 17/24 (70%)
 Frame = -3

Query: 333 LEALHLGDLLRIWVRTGATSPRTS 262
           LE  HL  LLRIW+++ ++SP  S
Sbjct: 452 LERRHLKALLRIWLKSNSSSPSFS 475


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,693,121
Number of Sequences: 53049
Number of extensions: 585120
Number of successful extensions: 1663
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1575
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1661
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2255362491
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)