Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0106
         (724 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein p...   107   2e-23
U59498-1|AAC47295.1|  152|Drosophila melanogaster nucleoplasmin-...   107   2e-23
AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p pro...   107   2e-23
AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA...   107   2e-23
AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA...    97   2e-20
U59497-1|AAC47294.1|  121|Drosophila melanogaster nucleoplasmin-...    78   1e-14
AY075169-1|AAL68039.1|  244|Drosophila melanogaster AT05815p pro...    31   2.1  
AE014297-755|AAF54243.3|  713|Drosophila melanogaster CG31369-PA...    30   3.7  
AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p pro...    29   8.5  

>X99293-1|CAA67679.1|  152|Drosophila melanogaster CRP1 protein
           protein.
          Length = 152

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/108 (48%), Positives = 75/108 (69%)
 Frame = +1

Query: 67  MTDEFFYGVTLSSSHQSETWDPXAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 246
           M +E FYGVTL++   S TWD     +Y R  KLVI+Q LLG +AK +E NV++V     
Sbjct: 1   MAEESFYGVTLTAESDSVTWD--VDEDYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56

Query: 247 QEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFTLVXGSGPVHLIGHHL 390
           +++V++P+AVLK GE+R V  D+EF  + VTF L+ GSGPV++ GH++
Sbjct: 57  KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104


>U59498-1|AAC47295.1|  152|Drosophila melanogaster
           nucleoplasmin-like protein protein.
          Length = 152

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/108 (48%), Positives = 75/108 (69%)
 Frame = +1

Query: 67  MTDEFFYGVTLSSSHQSETWDPXAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 246
           M +E FYGVTL++   S TWD     +Y R  KLVI+Q LLG +AK +E NV++V     
Sbjct: 1   MAEESFYGVTLTAESDSVTWD--VDEDYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56

Query: 247 QEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFTLVXGSGPVHLIGHHL 390
           +++V++P+AVLK GE+R V  D+EF  + VTF L+ GSGPV++ GH++
Sbjct: 57  KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104


>AY119592-1|AAM50246.1|  152|Drosophila melanogaster LD16456p
           protein.
          Length = 152

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/108 (48%), Positives = 75/108 (69%)
 Frame = +1

Query: 67  MTDEFFYGVTLSSSHQSETWDPXAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 246
           M +E FYGVTL++   S TWD     +Y R  KLVI+Q LLG +AK +E NV++V     
Sbjct: 1   MAEESFYGVTLTAESDSVTWD--VDEDYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56

Query: 247 QEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFTLVXGSGPVHLIGHHL 390
           +++V++P+AVLK GE+R V  D+EF  + VTF L+ GSGPV++ GH++
Sbjct: 57  KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104


>AE014297-4506|AAF56988.1|  152|Drosophila melanogaster CG7917-PA
           protein.
          Length = 152

 Score =  107 bits (256), Expect = 2e-23
 Identities = 52/108 (48%), Positives = 75/108 (69%)
 Frame = +1

Query: 67  MTDEFFYGVTLSSSHQSETWDPXAKAEYPRSNKLVIRQALLGPDAKPDELNVIQVEAMSL 246
           M +E FYGVTL++   S TWD     +Y R  KLVI+Q LLG +AK +E NV++V     
Sbjct: 1   MAEESFYGVTLTAESDSVTWD--VDEDYARGQKLVIKQILLGAEAKENEFNVVEVNTP-- 56

Query: 247 QEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFTLVXGSGPVHLIGHHL 390
           +++V++P+AVLK GE+R V  D+EF  + VTF L+ GSGPV++ GH++
Sbjct: 57  KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFKLIKGSGPVYIHGHNI 104


>AE014297-4505|AAF56987.1|  156|Drosophila melanogaster CG7911-PA
           protein.
          Length = 156

 Score = 97.5 bits (232), Expect = 2e-20
 Identities = 53/111 (47%), Positives = 70/111 (63%), Gaps = 6/111 (5%)
 Frame = +1

Query: 67  MTDEFFYGVTLSSSHQSETWD-PXAKAEY-PRSNKLVIRQALLGPDAKPDELNVIQVEAM 240
           M  E FYGVTLS       ++ P    EY   S+KL+I+Q  LGP+AK  E NV+Q E  
Sbjct: 1   MESESFYGVTLSEKEAIAQFEVPDVPEEYIVHSHKLIIKQISLGPEAKTGEFNVVQAETN 60

Query: 241 ----SLQEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFTLVXGSGPVHLIG 381
                 ++ +K+P+AVLKVGE+R +R ++EFP   VTF LV GSGPVH+ G
Sbjct: 61  INDDGEKKTLKIPIAVLKVGETRSLRPNVEFPNGSVTFKLVQGSGPVHVCG 111


>U59497-1|AAC47294.1|  121|Drosophila melanogaster
           nucleoplasmin-like protein-short protein.
          Length = 121

 Score = 78.2 bits (184), Expect = 1e-14
 Identities = 36/75 (48%), Positives = 56/75 (74%)
 Frame = +1

Query: 166 LVIRQALLGPDAKPDELNVIQVEAMSLQEAVKLPVAVLKVGESRHVRLDIEFPXAPVTFT 345
           +VI+Q LLG +AK +E NV++V     +++V++P+AVLK GE+R V  D+EF  + VTF 
Sbjct: 1   MVIKQILLGAEAKENEFNVVEVNTP--KDSVQIPIAVLKAGETRAVNPDVEFYESKVTFK 58

Query: 346 LVXGSGPVHLIGHHL 390
           L+ GSGPV++ GH++
Sbjct: 59  LIKGSGPVYIHGHNI 73


>AY075169-1|AAL68039.1|  244|Drosophila melanogaster AT05815p
           protein.
          Length = 244

 Score = 30.7 bits (66), Expect = 2.1
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 98  FHHHISQRHGIQXQKQNTHAATSSSFVKHC*VQMPNQ 208
           FHHH  Q+   Q Q+Q  HAA +++   H   Q P Q
Sbjct: 162 FHHHQQQQQQ-QQQQQQQHAAAAAAAALHAASQHPQQ 197


>AE014297-755|AAF54243.3|  713|Drosophila melanogaster CG31369-PA
           protein.
          Length = 713

 Score = 29.9 bits (64), Expect = 3.7
 Identities = 15/37 (40%), Positives = 20/37 (54%)
 Frame = +2

Query: 98  FHHHISQRHGIQXQKQNTHAATSSSFVKHC*VQMPNQ 208
           FHHH  Q+   Q Q+Q  HAA +++   H   Q P Q
Sbjct: 633 FHHHQQQQ---QQQQQQQHAAAAAAAALHAASQHPQQ 666


>AY061181-1|AAL28729.1|  158|Drosophila melanogaster LD14807p
           protein.
          Length = 158

 Score = 28.7 bits (61), Expect = 8.5
 Identities = 12/29 (41%), Positives = 17/29 (58%)
 Frame = +3

Query: 507 PRAKKRKXRIMPKAKLHRPXRMPRNEQTA 593
           PR K+R  R+ P+ + HRP R     +TA
Sbjct: 68  PRKKRRPRRLPPQQRRHRPKRPSLQAKTA 96


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,411,377
Number of Sequences: 53049
Number of extensions: 462402
Number of successful extensions: 1265
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 1173
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1244
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3231892257
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)