Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0102
(776 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2) id... 442 e-125
At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4) ne... 442 e-125
At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly ide... 442 e-124
At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly ide... 442 e-124
At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5) ne... 431 e-121
At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3) ne... 431 e-121
At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly ide... 412 e-115
At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly iden... 224 6e-59
At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly iden... 223 8e-59
At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly iden... 221 3e-58
At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly iden... 221 5e-58
At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) near... 220 7e-58
At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) near... 220 7e-58
At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical t... 218 4e-57
At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8) ide... 217 5e-57
At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly iden... 215 3e-56
At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin... 150 9e-37
At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin... 150 9e-37
At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR016... 31 1.1
At4g14510.1 68417.m02236 expressed protein contains Pfam domain,... 30 2.0
At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identica... 30 2.0
At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11) ide... 29 2.6
At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11) ide... 29 2.6
At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11) ide... 29 2.6
At1g61140.1 68414.m06888 SNF2 domain-containing protein / helica... 28 6.0
>At1g50010.1 68414.m05612 tubulin alpha-2/alpha-4 chain (TUA2)
identical to tubulin alpha-2/alpha-4 chain SP|P29510
GB:P29510 from [Arabidopsis thaliana]
Length = 450
Score = 442 bits (1090), Expect = e-125
Identities = 197/255 (77%), Positives = 227/255 (89%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASL+FDGAL
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDVTEFQTNLVPYP 263
>At1g04820.1 68414.m00478 tubulin alpha-2/alpha-4 chain (TUA4)
nearly identical to SP:P29510 Tubulin alpha-2/alpha-4
chain from [Arabidopsis thaliana]
Length = 450
Score = 442 bits (1090), Expect = e-125
Identities = 197/255 (77%), Positives = 227/255 (89%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GNACWELYCLEHGIQPDGQMP+DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D + ++DNEAIYDICRR+L IERPTYTNLNRL+ Q++SS+TASL+FDGAL
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLSIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDVTEFQTNLVPYP 263
>At4g14960.2 68417.m02299 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 450
Score = 442 bits (1088), Expect = e-124
Identities = 197/255 (77%), Positives = 227/255 (89%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASL+FDGAL
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDVTEFQTNLVPYP 263
>At4g14960.1 68417.m02298 tubulin alpha-6 chain (TUA6) nearly
identical to SP|P29511 Tubulin alpha-6 chain
{Arabidopsis thaliana}
Length = 427
Score = 442 bits (1088), Expect = e-124
Identities = 197/255 (77%), Positives = 227/255 (89%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GNACWELYCLEHGIQPDGQMP DKT+GGGDD+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYTIGKEIVDL LDRIRKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTIGKEIVDLCLDRIRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F +YP+PQVST+VVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTVYPSPQVSTSVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D + ++DNEAIYDICRR+L+IERPTYTNLNRL+ Q++SS+TASL+FDGAL
Sbjct: 189 LSTHSLLEHTDVSILLDNEAIYDICRRSLNIERPTYTNLNRLVSQVISSLTASLRFDGAL 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDVTEFQTNLVPYP 263
>At5g19780.1 68418.m02351 tubulin alpha-3/alpha-5 chain (TUA5)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 431 bits (1061), Expect = e-121
Identities = 193/255 (75%), Positives = 222/255 (87%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SL+FDGA+
Sbjct: 189 LSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAI 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDITEFQTNLVPYP 263
>At5g19770.1 68418.m02350 tubulin alpha-3/alpha-5 chain (TUA3)
nearly identical to SP|P20363 Tubulin alpha-3/alpha-5
chain {Arabidopsis thaliana}
Length = 450
Score = 431 bits (1061), Expect = e-121
Identities = 193/255 (75%), Positives = 222/255 (87%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSETGAGKHVPRAVFV
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGKHVPRAVFV 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+GKEIVDL LDR+RKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGKEIVDLCLDRVRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVDYGKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDYGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D A ++DNEAIYDICRR+LDIERPTYTNLNRLI QI+SS+T SL+FDGA+
Sbjct: 189 LSTHSLLEHTDVAVLLDNEAIYDICRRSLDIERPTYTNLNRLISQIISSLTTSLRFDGAI 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDITEFQTNLVPYP 263
>At1g64740.1 68414.m07340 tubulin alpha-1 chain (TUA1) nearly
identical to SP|P11139 Tubulin alpha-1 chain
{Arabidopsis thaliana}
Length = 450
Score = 412 bits (1015), Expect = e-115
Identities = 182/255 (71%), Positives = 218/255 (85%)
Frame = +2
Query: 11 LAKPXVXIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFV 190
+ + + +GN+CWELYCLEHGIQPDG MP+D T+G D+FNTFFSET +G+HVPRAVF+
Sbjct: 9 IGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQHVPRAVFL 68
Query: 191 DLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQ 370
DLEPTV+DEVRTGTYRQLFHPEQLI+GKEDAANN+ARGHYT+G+EIVD L+R+RKLAD
Sbjct: 69 DLEPTVIDEVRTGTYRQLFHPEQLISGKEDAANNFARGHYTVGREIVDTCLERLRKLADN 128
Query: 371 CTGLQGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSI 550
CTGLQGFL+F+ LL+ERLSVD+GKKSKL F IYP+PQVSTAVVEPYNS+
Sbjct: 129 CTGLQGFLVFNAVGGGTGSGLGSLLLERLSVDFGKKSKLGFTIYPSPQVSTAVVEPYNSV 188
Query: 551 LTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGAL 730
L+TH+ LEH+D ++DNEAIYDICRR+LDIERPTY+NLNRLI Q +SS+T SL+FDGA+
Sbjct: 189 LSTHSLLEHTDVVVLLDNEAIYDICRRSLDIERPTYSNLNRLISQTISSLTTSLRFDGAI 248
Query: 731 NVDLTEFXTNLXXYP 775
NVD+TEF TNL YP
Sbjct: 249 NVDITEFQTNLVPYP 263
>At1g75780.1 68414.m08801 tubulin beta-1 chain (TUB1) nearly
identical to SP|P12411 Tubulin beta-1 chain {Arabidopsis
thaliana}
Length = 447
Score = 224 bits (547), Expect = 6e-59
Identities = 101/248 (40%), Positives = 153/248 (61%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG+ WE+ C EHG+ P G+ D + N +++E G++VPRAV +DLEP +
Sbjct: 16 IGSKFWEVICDEHGVDPTGRYNGDSA-DLQLERINVYYNEASGGRYVPRAVLMDLEPGTM 74
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 75 DSIRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGF 134
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 135 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 194
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SL+F G LN DL +
Sbjct: 195 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKL 254
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 255 AVNLIPFP 262
>At5g12250.1 68418.m01439 tubulin beta-6 chain (TUB6) nearly
identical to SP|P29514 Tubulin beta-6 chain {Arabidopsis
thaliana}
Length = 449
Score = 223 bits (546), Expect = 8e-59
Identities = 103/251 (41%), Positives = 154/251 (61%), Gaps = 3/251 (1%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGD---DSFNTFFSETGAGKHVPRAVFVDLEP 202
IG+ WE+ C EHGI P G+ +G D + N +++E G++VPRA+ +DLEP
Sbjct: 16 IGSKFWEVVCDEHGIDPTGRY-----VGNSDLQLERVNVYYNEASCGRYVPRAILMDLEP 70
Query: 203 TVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGL 382
+D VRTG Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C L
Sbjct: 71 GTMDSVRTGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCL 130
Query: 383 QGFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTH 562
QGF + H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H
Sbjct: 131 QGFQVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVH 190
Query: 563 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDL 742
+E++D ++DNEA+YDIC R L + P++ +LN LI +S +T L+F G LN DL
Sbjct: 191 QLVENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDL 250
Query: 743 TEFXTNLXXYP 775
+ NL +P
Sbjct: 251 RKLAVNLIPFP 261
>At1g20010.1 68414.m02506 tubulin beta-5 chain (TUB5) nearly
identical to SP|P29513 Tubulin beta-5 chain {Arabidopsis
thaliana}
Length = 449
Score = 221 bits (541), Expect = 3e-58
Identities = 101/248 (40%), Positives = 153/248 (61%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG+ WE+ C EHGI G+ D T + N +++E G++VPRAV +DLEP +
Sbjct: 16 IGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGRYVPRAVLMDLEPGTM 74
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 75 DSIRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDAVLDVVRKEAENCDCLQGF 134
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 135 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 194
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T SL+F G LN DL +
Sbjct: 195 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCSLRFPGQLNSDLRKL 254
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 255 AVNLIPFP 262
>At4g20890.1 68417.m03029 tubulin beta-9 chain (TUB9) nearly
identical to SP|P29517 Tubulin beta-9 chain {Arabidopsis
thaliana}
Length = 444
Score = 221 bits (539), Expect = 5e-58
Identities = 102/248 (41%), Positives = 151/248 (60%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG WE+ C EHGI GQ D + + N +F+E GK+VPRAV +DLEP +
Sbjct: 16 IGAKFWEVICGEHGIDQTGQSCGDTDLQL--ERINVYFNEASGGKYVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 74 DSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At5g62700.1 68418.m07868 tubulin beta-2/beta-3 chain (TUB3) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 220 bits (538), Expect = 7e-58
Identities = 101/248 (40%), Positives = 150/248 (60%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP +
Sbjct: 16 IGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 74 DSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At5g62690.1 68418.m07867 tubulin beta-2/beta-3 chain (TUB2) nearly
identical to SP|P29512 Tubulin beta-2/beta-3 chain
{Arabidopsis thaliana}
Length = 450
Score = 220 bits (538), Expect = 7e-58
Identities = 101/248 (40%), Positives = 150/248 (60%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG WE+ C EHGI P G+ D + + N +++E G+ VPRAV +DLEP +
Sbjct: 16 IGAKFWEVVCAEHGIDPTGRYTGDSDLQL--ERINVYYNEASCGRFVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G Y Q F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 74 DSLRSGPYGQTFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At2g29550.1 68415.m03589 tubulin beta-7 chain (TUB7) identical to
GB:M84704 SP|P29515 Tubulin beta-7 chain {Arabidopsis
thaliana}
Length = 449
Score = 218 bits (532), Expect = 4e-57
Identities = 100/248 (40%), Positives = 152/248 (61%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG+ WE+ LEHGI G+ D + + N +++E G++VPRAV +DLEP +
Sbjct: 16 IGSKFWEVVNLEHGIDQTGRYVGDSELQL--ERVNVYYNEASCGRYVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 74 DSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLSTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At5g23860.1 68418.m02801 tubulin beta-8 chain (TUB8) (TUBB8)
identical to SP|P29516 Tubulin beta-8 chain {Arabidopsis
thaliana}; supporting cDNA gi|15451225|gb|AY054693.1|
Length = 449
Score = 217 bits (531), Expect = 5e-57
Identities = 100/248 (40%), Positives = 150/248 (60%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG WE+ C EHGI G+ + + + N +++E G+ VPRAV +DLEP +
Sbjct: 16 IGAKFWEVVCAEHGIDSTGRYQGENDLQL--ERVNVYYNEASCGRFVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D VR+G Y Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ C LQGF
Sbjct: 74 DSVRSGPYGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENCDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + L F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMLTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + P++ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLTTPSFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At5g44340.1 68418.m05429 tubulin beta-4 chain (TUB4) nearly
identical to SP|P24636 Tubulin beta-4 chain {Arabidopsis
thaliana}
Length = 444
Score = 215 bits (525), Expect = 3e-56
Identities = 100/248 (40%), Positives = 150/248 (60%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG WE+ C EHGI GQ D + + + +F+E GK+VPRAV +DLEP +
Sbjct: 16 IGAKFWEVICDEHGIDHTGQYVGDSPLQL--ERIDVYFNEASGGKYVPRAVLMDLEPGTM 73
Query: 212 DEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQGF 391
D +R+G + Q+F P+ + G+ A NN+A+GHYT G E++D VLD +RK A+ LQGF
Sbjct: 74 DSLRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELIDSVLDVVRKEAENSDCLQGF 133
Query: 392 LIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTL 571
+ H LL+ ++ +Y + + F+++P+P+VS VVEPYN+ L+ H +
Sbjct: 134 QVCHSLGGGTGSGMGTLLISKIREEYPDRMMMTFSVFPSPKVSDTVVEPYNATLSVHQLV 193
Query: 572 EHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDLTEF 751
E++D ++DNEA+YDIC R L + PT+ +LN LI +S +T L+F G LN DL +
Sbjct: 194 ENADECMVLDNEALYDICFRTLKLANPTFGDLNHLISATMSGVTCCLRFPGQLNSDLRKL 253
Query: 752 XTNLXXYP 775
NL +P
Sbjct: 254 AVNLIPFP 261
>At5g05620.1 68418.m00612 tubulin gamma-2 chain / gamma-2 tubulin
(TUBG2) identical to SP|P38558 Tubulin gamma-2 chain
(Gamma-2 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 150 bits (364), Expect = 9e-37
Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 3/251 (1%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP V+
Sbjct: 17 IGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVI 74
Query: 212 DEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 385
+ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD L+
Sbjct: 75 NGIQNGEYRNLYNHENIFLSDHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLE 133
Query: 386 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTH 562
GF++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 134 GFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLK 193
Query: 563 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDL 742
++DC ++DN A+ I L + PT+ N L+ ++S+ T +L++ G +N DL
Sbjct: 194 RLTLNADCVVVLDNTALNRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Query: 743 TEFXTNLXXYP 775
+L P
Sbjct: 254 VGLLASLIPTP 264
>At3g61650.1 68416.m06909 tubulin gamma-1 chain / gamma-1 tubulin
(TUBG1) identical to SP|P38557 Tubulin gamma-1 chain
(Gamma-1 tubulin) {Arabidopsis thaliana}
Length = 474
Score = 150 bits (364), Expect = 9e-37
Identities = 81/251 (32%), Positives = 132/251 (52%), Gaps = 3/251 (1%)
Frame = +2
Query: 32 IGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVV 211
IG W+ CLEHGI DG + T GG D + FF + ++PRA+ +DLEP V+
Sbjct: 17 IGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHYIPRALLIDLEPRVI 74
Query: 212 DEVRTGTYRQLFHPEQLITGKED--AANNYARGHYTIGKEIVDLVLDRIRKLADQCTGLQ 385
+ ++ G YR L++ E + A NN+A G++ GK + + ++D I + AD L+
Sbjct: 75 NGIQNGDYRNLYNHENIFVADHGGGAGNNWASGYHQ-GKGVEEEIMDMIDREADGSDSLE 133
Query: 386 GFLIFHXXXXXXXXXXXXLLMERLSVDYGKKSKLEFAIYPAP-QVSTAVVEPYNSILTTH 562
GF++ H L+E L+ Y KK ++++P + S VV+PYNS+LT
Sbjct: 134 GFVLCHSIAGGTGSGMGSYLLETLNDRYSKKLVQTYSVFPNQMETSDVVVQPYNSLLTLK 193
Query: 563 TTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITASLKFDGALNVDL 742
++DC ++DN A+ I L + PT+ N L+ ++S+ T +L++ G +N DL
Sbjct: 194 RLTLNADCVVVLDNTALGRIAVERLHLTNPTFAQTNSLVSTVMSASTTTLRYPGYMNNDL 253
Query: 743 TEFXTNLXXYP 775
+L P
Sbjct: 254 VGLLASLIPTP 264
>At1g24460.1 68414.m03081 myosin-related contains TIGRFAM TIGR01612:
reticulocyte binding protein; similar to Myosin heavy
chain, non-muscle (Zipper protein) (Myosin II)
(SP:Q99323) {Drosophila melanogaster} similar to EST
gb|T76116
Length = 1730
Score = 30.7 bits (66), Expect = 1.1
Identities = 27/108 (25%), Positives = 41/108 (37%), Gaps = 3/108 (2%)
Frame = -2
Query: 424 AGTSTEGVEDQESLQTGTLVSELADSVQNQIYDFLSNXXXXXXXXXGRIFLTSNKLFWMK 245
+G TEGVED S LV D ++ QI D + IF L +++
Sbjct: 609 SGLMTEGVEDHTSSDINLLVDRSFDKIEKQIRDSSDS-----SYGNEEIFEAFQSLLYVR 663
Query: 244 QLSVCASADLINNSR---FKIDEDSTGYVLASSGLAEESVERIVSTPD 110
L +++ F++ S +AS LA E+I D
Sbjct: 664 DLEFSLCKEMLGEGELISFQVSNLSDELKIASQELAFVKEEKIALEKD 711
>At4g14510.1 68417.m02236 expressed protein contains Pfam domain,
PF04581: Protein of unknown function (DUF578)
Length = 932
Score = 29.9 bits (64), Expect = 2.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +2
Query: 65 EHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKHVPRAVFVDLEPTVVD 214
E GIQ +G + ++ + G D +T F + A P FV+L+ +D
Sbjct: 881 EGGIQANGSL-SETDVEFGSDESDTDFGDNSASSTTPETTFVELQNEELD 929
>At3g57510.1 68416.m06402 endo-polygalacturonase (ADPG1) identical
to endo-polygalacturonase [Arabidopsis thaliana]
GI:2597824
Length = 431
Score = 29.9 bits (64), Expect = 2.0
Identities = 16/48 (33%), Positives = 26/48 (54%), Gaps = 3/48 (6%)
Frame = -2
Query: 643 NVEITA---ADVIDGFIVDHESTVRVLKGCVGGEDRVVGLDDGSGNLR 509
NVEITA + DG + + +RV +G D + ++DG+ NL+
Sbjct: 230 NVEITAPGDSPNTDGIHITNTQNIRVSNSDIGTGDDCISIEDGTQNLQ 277
>At3g29160.3 68416.m03654 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 359
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 14 AKPXVXIGNACWELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAV 184
A P V + + LY L G P D +P K I GG + + S A +PR +
Sbjct: 195 AGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRML 253
Query: 185 FVD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VD ++ + E+R + Q P L D + + I +E+V++ DR
Sbjct: 254 IVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.2 68416.m03653 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 14 AKPXVXIGNACWELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAV 184
A P V + + LY L G P D +P K I GG + + S A +PR +
Sbjct: 195 AGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRML 253
Query: 185 FVD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VD ++ + E+R + Q P L D + + I +E+V++ DR
Sbjct: 254 IVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At3g29160.1 68416.m03652 Snf1-related protein kinase (KIN11)
identical to protein kinase AKin11 GI:1729444 from
[Arabidopsis thaliana]
Length = 512
Score = 29.5 bits (63), Expect = 2.6
Identities = 31/116 (26%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
Frame = +2
Query: 14 AKPXVXIGNACWELYCLEHGIQP--DGQMPT-DKTIGGGDDSFNTFFSETGAGKHVPRAV 184
A P V + + LY L G P D +P K I GG + + S A +PR +
Sbjct: 195 AGPEVDVWSCGVILYALLCGTLPFDDENIPNLFKKIKGGIYTLPSHLSSE-ARDLIPRML 253
Query: 185 FVD-LEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLDR 349
VD ++ + E+R + Q P L D + + I +E+V++ DR
Sbjct: 254 IVDPVKRITIPEIRQHRWFQTHLPRYLAVSPPDTVEQAKKINEEIVQEVVNMGFDR 309
>At1g61140.1 68414.m06888 SNF2 domain-containing protein / helicase
domain-containing protein / zinc finger protein-related
similar to ATPase [Homo sapiens] GI:531196; contains
Pfam profiles PF00271: Helicase conserved C-terminal
domain, PF00176: SNF2 family N-terminal domain, PF00097:
Zinc finger, C3HC4 type (RING finger)
Length = 1287
Score = 28.3 bits (60), Expect = 6.0
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 6/75 (8%)
Frame = +2
Query: 461 VDYGKKSKLEFAIYPAPQVSTAVVEPYNSILTTHTTLEHSD------CAFMVDNEAIYDI 622
+D+ + F P VS A V+PYNS +H D C+F DN+ ++
Sbjct: 285 IDFSSARGISFKFESNPSVSPACVKPYNS-FDSHLADSDLDRPNNYSCSFQ-DNKTVHVK 342
Query: 623 CRRNLDIERPTYTNL 667
+ + E+ Y+++
Sbjct: 343 VKPEAESEKVVYSSV 357
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,663,962
Number of Sequences: 28952
Number of extensions: 362954
Number of successful extensions: 1162
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 1091
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1147
length of database: 12,070,560
effective HSP length: 80
effective length of database: 9,754,400
effective search space used: 1736283200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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