Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0100
(724 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_55463| Best HMM Match : OPA3 (HMM E-Value=0) 62 3e-10
SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.) 57 2e-08
SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.) 56 2e-08
SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20) 56 2e-08
SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013) 47 2e-05
SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41) 32 0.41
SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.) 32 0.41
SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 0.72
SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.) 31 1.2
SB_11461| Best HMM Match : NHL (HMM E-Value=0) 30 2.2
SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11) 29 2.9
SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092) 29 5.0
SB_46360| Best HMM Match : EGF (HMM E-Value=0) 29 5.0
SB_6077| Best HMM Match : EGF (HMM E-Value=0) 29 5.0
SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 6.7
SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48) 28 6.7
SB_55226| Best HMM Match : Cofilin_ADF (HMM E-Value=4.7e-14) 28 8.8
SB_25705| Best HMM Match : PH (HMM E-Value=2e-17) 28 8.8
>SB_55463| Best HMM Match : OPA3 (HMM E-Value=0)
Length = 387
Score = 62.5 bits (145), Expect = 3e-10
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 3/146 (2%)
Frame = +3
Query: 51 MASGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQ 221
M +G+ + + EIKK RY++F + ++K+ V + E +E L+DL
Sbjct: 247 MEAGLNIKGEVTDGWNEIKKAASGLRYIIFKMDEKKENVVFEKKKMKCECSHEDVLDDLP 306
Query: 222 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 401
E RY + +Y + E + + KL L+ WCPD ++K +M+ +++F +KK
Sbjct: 307 ---ADEPRYIALNLDYKNV-----EGADRSKLVLIFWCPDNCEIKSRMVSAATFQDVKKK 358
Query: 402 LVGVQKYIQATDLSEASHEAVEXKLR 479
G K ++ + SE S EA++ +L+
Sbjct: 359 CPGGAKCLEIQERSELSFEALKEELK 384
>SB_30343| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 140
Score = 56.8 bits (131), Expect = 2e-08
Identities = 39/144 (27%), Positives = 72/144 (50%), Gaps = 3/144 (2%)
Frame = +3
Query: 57 SGVTVSDACKTTYEEIKKDKKH-RYVVFYIRDEKQIDVETVGERNAE--YEQFLEDLQKG 227
+G+ + + EIK RY +F + ++K+ V + E ++ L+DL
Sbjct: 2 AGLNIKSDVTDGWNEIKMVASGLRYTIFKMDEKKENVVMEKKKMITECCHDDVLDDLP-- 59
Query: 228 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 407
T E RY + +Y ++ E +++ KL L+ WCPD +K KM+ +++F + K
Sbjct: 60 -TDEPRYVALNLDYKNE-----EGAERSKLVLIFWCPDNCGIKNKMVSAATFKEVMKKCP 113
Query: 408 GVQKYIQATDLSEASHEAVEXKLR 479
G K ++ D + S EA++ KL+
Sbjct: 114 GGAKCLEIQDRFDLSFEALKEKLK 137
>SB_35589| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 150
Score = 56.4 bits (130), Expect = 2e-08
Identities = 40/150 (26%), Positives = 72/150 (48%), Gaps = 11/150 (7%)
Frame = +3
Query: 57 SGVTVSDACKTTYEEIK-KDKKHRYVVFYIRDE----------KQIDVETVGERNAEYEQ 203
SG+ + D Y+ ++ K+K H++ F I D+ K++D T E A ++Q
Sbjct: 4 SGIKIDDESLHLYQTMQGKEKSHKFATFKISDDGKMVVIDHILKRVDTHTREEDRAIFDQ 63
Query: 204 FLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSF 383
LE L E RY L+D + + + L + WC D A +KK+M+ +++
Sbjct: 64 MLEKLSDS---EPRYILYDLNFPRK-----DGRAFHHLVYIFWCSDNAPIKKRMVSAATN 115
Query: 384 DALKKSLVGVQKYIQATDLSEASHEAVEXK 473
+ LK V V+K Q D ++ +++ + K
Sbjct: 116 ELLKTKFV-VKKVFQINDRADLNYDDIADK 144
>SB_28028| Best HMM Match : Cofilin_ADF (HMM E-Value=2e-20)
Length = 151
Score = 56.4 bits (130), Expect = 2e-08
Identities = 39/150 (26%), Positives = 68/150 (45%), Gaps = 7/150 (4%)
Frame = +3
Query: 57 SGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDV-----ETVGERNAEYEQ--FLED 215
SG+ V D + +K K H+Y +F I DE + V ++V E ++ F +
Sbjct: 4 SGIKVDDESLKLSQTMKSMKTHKYAIFKICDEANMVVIDQTFKSVVTNTREEDRAIFYQM 63
Query: 216 LQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALK 395
++K E RY L+D ++ + E L +SWC D A ++KKM +S+ D ++
Sbjct: 64 VEKLSDREPRYILYDMKFPRK----EEKRIFNNLVFISWCSDKAPIEKKMKLASTQDYVR 119
Query: 396 KSLVGVQKYIQATDLSEASHEAVEXKLRAT 485
K + A D + ++ + K T
Sbjct: 120 KKFSEATTSVNANDFDDLDYDEIAAKAEKT 149
>SB_14227| Best HMM Match : Cofilin_ADF (HMM E-Value=0.0013)
Length = 310
Score = 46.8 bits (106), Expect = 2e-05
Identities = 22/58 (37%), Positives = 33/58 (56%)
Frame = +3
Query: 273 HQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSE 446
H+ Q A FL C D A +KKKML S+++ LKK G++KY +A+++ E
Sbjct: 241 HKTQDHRSALSDLVFFLFDRCSDEAPIKKKMLAGSTWEYLKKKFDGLKKYFEASEICE 298
>SB_36002| Best HMM Match : Peptidase_A17 (HMM E-Value=9.3e-41)
Length = 193
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 162 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 308
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 83 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 134
>SB_20964| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 311
Score = 32.3 bits (70), Expect = 0.41
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 162 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 308
D E GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 139 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 190
>SB_50916| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 1681
Score = 31.5 bits (68), Expect = 0.72
Identities = 18/52 (34%), Positives = 26/52 (50%), Gaps = 3/52 (5%)
Frame = +3
Query: 162 DVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 308
D E GER + +L+DL++ C YG + E T+ G +ASKK
Sbjct: 422 DEELTGERKKRWLSWLDDLKRVKEVRIARCVYGGSEAEVTYSLHGFGDASKK 473
>SB_44895| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 237
Score = 30.7 bits (66), Expect = 1.2
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Frame = -1
Query: 334 HHDIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS 212
H + + +C+ S V +C +S +RPY HSPV P+C S
Sbjct: 130 HSPVDRPYCY---SPVDHPYC-HSPVDRPYCHSPVDRPYCHS 167
Score = 30.3 bits (65), Expect = 1.7
Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 3/55 (5%)
Frame = -1
Query: 331 HDIRKSFCFLLASDVPWHWCVYSKSNRPYLHSPVP-PFCRS--SRNCSYSALRSP 176
H + +C S V +C YS +RPY HSPV P+C S R YS + P
Sbjct: 95 HSWSRPYCH---SPVDRPYC-YSPVDRPYCHSPVDRPYCHSPVDRPYCYSPVDHP 145
>SB_11461| Best HMM Match : NHL (HMM E-Value=0)
Length = 819
Score = 29.9 bits (64), Expect = 2.2
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Frame = +3
Query: 507 THELA--TKPNPLSDTPALTTRGHDTTSRLVLLQRKTNSINMIDF 635
T EL+ T+ NPL TPAL++RG T R+ + + N+ IDF
Sbjct: 296 TQELSDTTRLNPL--TPALSSRGQRGTPRIPYRESQQNAEGNIDF 338
>SB_12736| Best HMM Match : Peptidase_A17 (HMM E-Value=3.1e-11)
Length = 597
Score = 29.5 bits (63), Expect = 2.9
Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 3/56 (5%)
Frame = +3
Query: 150 EKQIDVETVGERNAEYEQFLEDLQKGGT---GECRYGLFDFEYTHQCQGTSEASKK 308
E ++ GER + +L+DL++ C YG+ E T+ G +ASKK
Sbjct: 222 EVRLGRRLTGERKKRWLSWLDDLKRVKEVRIARCVYGVSGAEVTYSLHGFGDASKK 277
>SB_43866| Best HMM Match : Gelsolin (HMM E-Value=0.092)
Length = 341
Score = 28.7 bits (61), Expect = 5.0
Identities = 16/84 (19%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Frame = +3
Query: 162 DVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPD 341
+VET E++ + E+ +++ ++ G E + L FE TH+ T ++ +
Sbjct: 151 EVETTTEQDKQPEEVVKNSEEEGNHEDQEPLLSFEDTHEDPETKPVEGEEPALYQKVTEE 210
Query: 342 -TAKVKKKMLYSSSFDALKKSLVG 410
+A+++++ +A++++++G
Sbjct: 211 PSAEIEQEKKDDEEDNAMEEAILG 234
>SB_46360| Best HMM Match : EGF (HMM E-Value=0)
Length = 352
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 342 CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHICI 238
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 189 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 224
>SB_6077| Best HMM Match : EGF (HMM E-Value=0)
Length = 1165
Score = 28.7 bits (61), Expect = 5.0
Identities = 12/36 (33%), Positives = 18/36 (50%), Gaps = 1/36 (2%)
Frame = -2
Query: 342 CPGTTTSGRASVS-C*PPTCPGTGACIQSQTGHICI 238
CP T VS C C G+C+ +Q+G+ C+
Sbjct: 1002 CPTGVTGRHCDVSICDSKPCRNNGSCVLTQSGYQCL 1037
>SB_8814| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 824
Score = 28.3 bits (60), Expect = 6.7
Identities = 20/61 (32%), Positives = 21/61 (34%), Gaps = 1/61 (1%)
Frame = +3
Query: 507 THELATKPNPLSDTPALTTRGHDTTSRLVLLQRKT-NSINMIDFTGGRTSCESARVXTTX 683
THE L DT T HDTT L T N + D TG T T
Sbjct: 515 THETTRHDTHLHDTTENDTHPHDTTGNDTYLHDTTENDTHPHDTTGNDTQLHDTTGNKTR 574
Query: 684 P 686
P
Sbjct: 575 P 575
>SB_3240| Best HMM Match : Sec8_exocyst (HMM E-Value=0.48)
Length = 643
Score = 28.3 bits (60), Expect = 6.7
Identities = 12/23 (52%), Positives = 14/23 (60%)
Frame = +1
Query: 187 TPNTNSSSRICRRAVPGNADMAC 255
+P T SSR C VPG+AD C
Sbjct: 14 SPRTGRSSRSCSIPVPGHADHHC 36
>SB_55226| Best HMM Match : Cofilin_ADF (HMM E-Value=4.7e-14)
Length = 141
Score = 27.9 bits (59), Expect = 8.8
Identities = 27/119 (22%), Positives = 49/119 (41%)
Frame = +3
Query: 111 DKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGECRYGLFDFEYTHQCQGT 290
D ++ + VF + I + G+ EY++FL + + + Y G
Sbjct: 20 DSENTWAVFTYDESNTICLHKSGK---EYDEFLAEFDESDRA--------YAYVRIETG- 67
Query: 291 SEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYIQATDLSEASHEAVE 467
E S++ K ++W + KK S+ +K+ L IQA D SE ++ V+
Sbjct: 68 DELSRRAKFAFITWVGPSVSPLKKAKVSTDKAFVKQVLQNFAVEIQADDKSELQYDHVK 126
>SB_25705| Best HMM Match : PH (HMM E-Value=2e-17)
Length = 409
Score = 27.9 bits (59), Expect = 8.8
Identities = 15/41 (36%), Positives = 22/41 (53%), Gaps = 2/41 (4%)
Frame = +3
Query: 456 EAVEXKLRATDRQ*TAFTHEL--ATKPNPLSDTPALTTRGH 572
E K+ AT+ AFTH+L KP +SD P + +G+
Sbjct: 23 ETPPIKIEATNHHAKAFTHDLENLAKPLKVSDVPNVFLQGY 63
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,820,269
Number of Sequences: 59808
Number of extensions: 386240
Number of successful extensions: 1330
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 1167
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1320
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1925890720
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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