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Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0100
         (724 letters)

Database: arabidopsis 
           28,952 sequences; 12,070,560 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4) id...   115   4e-26
At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1) id...   112   3e-25
At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4) id...   109   2e-24
At4g00680.1 68417.m00093 actin-depolymerizing factor, putative s...   109   2e-24
At1g01750.1 68414.m00094 actin-depolymerizing factor, putative s...   109   2e-24
At5g52360.1 68418.m06497 actin-depolymerizing factor, putative s...   106   1e-23
At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3) id...   105   3e-23
At3g46000.1 68416.m04977 actin-depolymerizing factor, putative (...   104   7e-23
At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6) id...   103   9e-23
At4g25590.1 68417.m03687 actin-depolymerizing factor, putative s...   102   3e-22
At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5) id...    95   6e-20
At4g34970.1 68417.m04957 actin-depolymerizing factor, putative s...    89   4e-18
At3g45990.1 68416.m04976 actin-depolymerizing factor, putative s...    87   1e-17
At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3) id...    74   1e-13
At3g03290.1 68416.m00326 universal stress protein (USP) family p...    31   0.58 
At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger) fa...    27   9.5  
At1g64430.1 68414.m07302 expressed protein                             27   9.5  

>At5g59890.1 68418.m07510 actin-depolymerizing factor 4 (ADF4)
           identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
           (ADF-4) (AtADF4) {Arabidopsis thaliana}
          Length = 139

 Score =  115 bits (276), Expect = 4e-26
 Identities = 57/142 (40%), Positives = 88/142 (61%), Gaps = 1/142 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  + E+K  + HR++V+ I + +KQ+ VE VGE    YE F   L    
Sbjct: 5   ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP--- 61

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             ECRY ++DF++      T+E  +K K+F ++WCPD AKV+ KM+Y+SS D  K+ L G
Sbjct: 62  ADECRYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDG 116

Query: 411 VQKYIQATDLSEASHEAVEXKL 476
           +Q  +QATD +E   + ++ ++
Sbjct: 117 IQVELQATDPTEMDLDVLKSRV 138


>At3g46010.1 68416.m04978 actin-depolymerizing factor 1 (ADF1)
           identical to SP|Q39250 Actin-depolymerizing factor 1
           (ADF-1) (AtADF1) {Arabidopsis thaliana}
          Length = 139

 Score =  112 bits (269), Expect = 3e-25
 Identities = 56/132 (42%), Positives = 84/132 (63%), Gaps = 1/132 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  + E+K  + HR++V+ I + +KQ+ VE VG+    YE+F   L    
Sbjct: 5   ASGMAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVVVEKVGQPIQTYEEFAACLP--- 61

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             ECRY ++DF++      T+E  +K K+F ++WCPD AKV+ KM+Y+SS D  K+ L G
Sbjct: 62  ADECRYAIYDFDFV-----TAENCQKSKIFFIAWCPDIAKVRSKMIYASSKDRFKRELDG 116

Query: 411 VQKYIQATDLSE 446
           +Q  +QATD +E
Sbjct: 117 IQVELQATDPTE 128


>At5g59890.2 68418.m07511 actin-depolymerizing factor 4 (ADF4)
           identical to SP|Q9ZSK3 Actin-depolymerizing factor 4
           (ADF-4) (AtADF4) {Arabidopsis thaliana}
          Length = 132

 Score =  109 bits (262), Expect = 2e-24
 Identities = 54/139 (38%), Positives = 85/139 (61%), Gaps = 1/139 (0%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGTGE 239
           + V D CK  + E+K  + HR++V+ I + +KQ+ VE VGE    YE F   L      E
Sbjct: 1   MAVHDDCKLRFLELKAKRTHRFIVYKIEEKQKQVIVEKVGEPILTYEDFAASLP---ADE 57

Query: 240 CRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQK 419
           CRY ++DF++      T+E  +K K+F ++WCPD AKV+ KM+Y+SS D  K+ L G+Q 
Sbjct: 58  CRYAIYDFDFV-----TAENCQKSKIFFIAWCPDVAKVRSKMIYASSKDRFKRELDGIQV 112

Query: 420 YIQATDLSEASHEAVEXKL 476
            +QATD +E   + ++ ++
Sbjct: 113 ELQATDPTEMDLDVLKSRV 131


>At4g00680.1 68417.m00093 actin-depolymerizing factor, putative
           strong similarity to SP|P30175 Actin-depolymerizing
           factor (ADF) {Lilium longiflorum}; contains Pfam profile
           PF00241: Cofilin/tropomyosin-type actin-binding protein
          Length = 140

 Score =  109 bits (261), Expect = 2e-24
 Identities = 55/143 (38%), Positives = 89/143 (62%), Gaps = 2/143 (1%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 227
           ASG+ V+D CK  + E+K  + +R++VF I DEK  Q+ +E +G     Y+ F   +   
Sbjct: 5   ASGMHVNDECKIKFLELKAKRTYRFIVFKI-DEKAQQVQIEKLGNPEETYDDFTSSIPDD 63

Query: 228 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 407
              ECRY ++DF++T     T +  +K K+F ++W PDT++V+ KMLY+SS D  K+ + 
Sbjct: 64  ---ECRYAVYDFDFT-----TEDNCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKREME 115

Query: 408 GVQKYIQATDLSEASHEAVEXKL 476
           G+Q  +QATD SE S + ++ +L
Sbjct: 116 GIQVELQATDPSEMSLDIIKGRL 138


>At1g01750.1 68414.m00094 actin-depolymerizing factor, putative
           strong similarity to SP|P30175 Actin-depolymerizing
           factor (ADF) {Lilium longiflorum}; contains Pfam profile
           PF00241: Cofilin/tropomyosin-type actin-binding protein
          Length = 140

 Score =  109 bits (261), Expect = 2e-24
 Identities = 56/143 (39%), Positives = 90/143 (62%), Gaps = 2/143 (1%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEK--QIDVETVGERNAEYEQFLEDLQKG 227
           ASG+ VSD CK  + E+K  + +R++VF I DEK  Q+ ++ +G     YE F   + + 
Sbjct: 5   ASGMHVSDECKLKFLELKAKRNYRFIVFKI-DEKAQQVMIDKLGNPEETYEDFTRSIPED 63

Query: 228 GTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLV 407
              ECRY ++D+++T     T E  +K K+F ++W PDT++V+ KMLY+SS D  K+ L 
Sbjct: 64  ---ECRYAVYDYDFT-----TPENCQKSKIFFIAWSPDTSRVRSKMLYASSKDRFKRELD 115

Query: 408 GVQKYIQATDLSEASHEAVEXKL 476
           G+Q  +QATD SE S + ++ ++
Sbjct: 116 GIQVELQATDPSEMSLDIIKGRV 138


>At5g52360.1 68418.m06497 actin-depolymerizing factor, putative
           strong similarity to pollen specific
           actin-depolymerizing factor 2 [Nicotiana tabacum]
           GI:22857914; contains Pfam profile PF00241:
           Cofilin/tropomyosin-type actin-binding protein
          Length = 137

 Score =  106 bits (255), Expect = 1e-23
 Identities = 53/140 (37%), Positives = 87/140 (62%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 233
           ASG+ V D CK  + E+K  + +R+++F I D +Q+ VE +G     Y+ F   L     
Sbjct: 5   ASGMAVEDECKLKFLELKAKRNYRFIIFRI-DGQQVVVEKLGSPQENYDDFTNYLPPN-- 61

Query: 234 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 413
            ECRY ++DF++T     T+E  +K K+F ++W PD+++V+ KM+Y+SS D  K+ L G+
Sbjct: 62  -ECRYAVYDFDFT-----TAENIQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGI 115

Query: 414 QKYIQATDLSEASHEAVEXK 473
           Q  +QATD SE S + ++ +
Sbjct: 116 QVELQATDPSEMSLDIIKSR 135


>At5g59880.1 68418.m07508 actin-depolymerizing factor 3 (ADF3)
           identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
           (ADF 3) (AtADF3) {Arabidopsis thaliana}
          Length = 139

 Score =  105 bits (252), Expect = 3e-23
 Identities = 51/132 (38%), Positives = 81/132 (61%), Gaps = 1/132 (0%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  + E+K  + HR++++ I + +KQ+ VE +GE    +E     L    
Sbjct: 5   ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVG 410
             ECRY +FDF++      +SE   + ++F ++W PDTA+V+ KM+Y+SS D  K+ L G
Sbjct: 62  ADECRYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTARVRSKMIYASSKDRFKRELDG 116

Query: 411 VQKYIQATDLSE 446
           +Q  +QATD +E
Sbjct: 117 IQVELQATDPTE 128


>At3g46000.1 68416.m04977 actin-depolymerizing factor, putative
           (ADF2) strong similarity to SP|Q9ZSK3
           Actin-depolymerizing factor 4 (ADF-4) (AtADF4)
           {Arabidopsis thaliana}; contains Pfam profile PF00241:
           Cofilin/tropomyosin-type actin-binding protein
          Length = 137

 Score =  104 bits (249), Expect = 7e-23
 Identities = 54/131 (41%), Positives = 80/131 (61%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGT 233
           ASG+ V D CK  + E+K  +  R +V+ I D KQ+ VE +GE    Y+ F   L     
Sbjct: 5   ASGMAVHDDCKLKFMELKAKRTFRTIVYKIED-KQVIVEKLGEPEQSYDDFAASLP---A 60

Query: 234 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 413
            +CRY ++DF++      T+E  +K K+F ++W PDTAKV+ KM+Y+SS D  K+ L G+
Sbjct: 61  DDCRYCIYDFDFV-----TAENCQKSKIFFIAWSPDTAKVRDKMIYASSKDRFKRELDGI 115

Query: 414 QKYIQATDLSE 446
           Q  +QATD +E
Sbjct: 116 QVELQATDPTE 126


>At2g31200.1 68415.m03810 actin-depolymerizing factor 6 (ADF6)
           identical to SP|Q9ZSK2 Actin-depolymerizing factor 6
           (ADF-6) (AtADF6) {Arabidopsis thaliana}
          Length = 146

 Score =  103 bits (248), Expect = 9e-23
 Identities = 54/140 (38%), Positives = 83/140 (59%), Gaps = 1/140 (0%)
 Frame = +3

Query: 57  SGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGGT 233
           SG+ V+D  KTT+ E+++ K HRYVVF I + +K++ VE  G     Y+ FL  L     
Sbjct: 13  SGMGVADESKTTFLELQRKKTHRYVVFKIDESKKEVVVEKTGNPTESYDDFLASLPDN-- 70

Query: 234 GECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGV 413
            +CRY ++DF++      TSE  +K K+F  +W P T+ ++ K+LYS+S D L + L G+
Sbjct: 71  -DCRYAVYDFDFV-----TSENCQKSKIFFFAWSPSTSGIRAKVLYSTSKDQLSRELQGI 124

Query: 414 QKYIQATDLSEASHEAVEXK 473
              IQATD +E   E +  +
Sbjct: 125 HYEIQATDPTEVDLEVLRER 144


>At4g25590.1 68417.m03687 actin-depolymerizing factor, putative
           strong similarity to pollen specific
           actin-depolymerizing factor 2 [Nicotiana tabacum]
           GI:22857914; contains Pfam profile PF00241:
           Cofilin/tropomyosin-type actin-binding protein
          Length = 130

 Score =  102 bits (244), Expect = 3e-22
 Identities = 50/137 (36%), Positives = 83/137 (60%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETVGERNAEYEQFLEDLQKGGTGEC 242
           + V D CK  + E+K  + +R+++F I D +Q+ VE +G  +  Y+ F   L      EC
Sbjct: 1   MAVEDECKLKFLELKSKRNYRFIIFRI-DGQQVVVEKLGNPDETYDDFTASLP---ANEC 56

Query: 243 RYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKY 422
           RY +FDF++      T E  +K K+F ++W PD+++V+ KM+Y+SS D  K+ L G+Q  
Sbjct: 57  RYAVFDFDFI-----TDENCQKSKIFFIAWSPDSSRVRMKMVYASSKDRFKRELDGIQVE 111

Query: 423 IQATDLSEASHEAVEXK 473
           +QATD SE S + ++ +
Sbjct: 112 LQATDPSEMSFDIIKSR 128


>At2g16700.1 68415.m01916 actin-depolymerizing factor 5 (ADF5)
           identical to SP|Q9ZNT3 Actin-depolymerizing factor 5
           (ADF-5) (AtADF5) {Arabidopsis thaliana}
          Length = 143

 Score = 94.7 bits (225), Expect = 6e-20
 Identities = 46/146 (31%), Positives = 88/146 (60%), Gaps = 2/146 (1%)
 Frame = +3

Query: 48  KMAS-GVTVSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQ 221
           KMA+ G+ V+D C +++ ++K  K HRY+VF I ++ +++ V+ VG     Y    + L 
Sbjct: 6   KMATTGMRVTDECTSSFMDMKWKKVHRYIVFKIEEKSRKVTVDKVGGAGESYHDLEDSLP 65

Query: 222 KGGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKS 401
                +CRY +FDF++      T +  +K K+F ++W P+ +K++ K+LY++S D L++ 
Sbjct: 66  ---VDDCRYAVFDFDFV-----TVDNCRKSKIFFIAWSPEASKIRAKILYATSKDGLRRV 117

Query: 402 LVGVQKYIQATDLSEASHEAVEXKLR 479
           L G+   +QATD +E   + ++ + +
Sbjct: 118 LEGIHYELQATDPTEMGFDIIQDRAK 143


>At4g34970.1 68417.m04957 actin-depolymerizing factor, putative
           similar to SP|Q9ZNT3 Actin-depolymerizing factor 5
           (ADF-5) (AtADF5) {Arabidopsis thaliana}; contains Pfam
           profile PF00241: Cofilin/tropomyosin-type actin-binding
           protein
          Length = 130

 Score = 88.6 bits (210), Expect = 4e-18
 Identities = 41/138 (29%), Positives = 82/138 (59%), Gaps = 1/138 (0%)
 Frame = +3

Query: 69  VSDACKTTYEEIKKDKKHRYVVFYIRDE-KQIDVETVGERNAEYEQFLEDLQKGGTGECR 245
           ++D CK ++ E+K  K HRYVV+ + ++ +++ V+ VG     Y+     L +    +CR
Sbjct: 1   MTDDCKKSFMEMKWKKVHRYVVYKLEEKSRKVTVDKVGAAGESYDDLAASLPED---DCR 57

Query: 246 YGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSLVGVQKYI 425
           Y +FDF+Y      T +  +  K+F ++W P+ +++++KM+Y++S   L++ L GV   +
Sbjct: 58  YAVFDFDYV-----TVDNCRMSKIFFITWSPEASRIREKMMYATSKSGLRRVLDGVHYEL 112

Query: 426 QATDLSEASHEAVEXKLR 479
           QATD +E   + ++ + +
Sbjct: 113 QATDPTEMGFDKIQDRAK 130


>At3g45990.1 68416.m04976 actin-depolymerizing factor, putative
           similar to SP|Q9ZSK3 Actin-depolymerizing factor 4
           (ADF-4) (AtADF4) {Arabidopsis thaliana}; contains Pfam
           profile PF00241: Cofilin/tropomyosin-type actin-binding
           protein
          Length = 133

 Score = 87.0 bits (206), Expect = 1e-17
 Identities = 49/144 (34%), Positives = 78/144 (54%), Gaps = 6/144 (4%)
 Frame = +3

Query: 63  VTVSDACKTTYEEIKKDKKHRYVVFYIRDEKQIDVETV------GERNAEYEQFLEDLQK 224
           + + D CK T+ E+K+ +  R +V+ I D  Q+ VE        GER   YE+F   L  
Sbjct: 1   MVLHDDCKLTFLELKERRTFRSIVYKIEDNMQVIVEKHHYKKMHGEREQSYEEFANSLP- 59

Query: 225 GGTGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAKVKKKMLYSSSFDALKKSL 404
               ECRY + D E+            ++K+  ++W P TAK++KKM+YSS+ D  K+ L
Sbjct: 60  --ADECRYAILDIEFV---------PGERKICFIAWSPSTAKMRKKMIYSSTKDRFKREL 108

Query: 405 VGVQKYIQATDLSEASHEAVEXKL 476
            G+Q    ATDL++ S +A+  ++
Sbjct: 109 DGIQVEFHATDLTDISLDAIRRRI 132


>At5g59880.2 68418.m07509 actin-depolymerizing factor 3 (ADF3)
           identical to SP|Q9ZSK4 Actin-depolymerizing factor 3
           (ADF 3) (AtADF3) {Arabidopsis thaliana}
          Length = 124

 Score = 73.7 bits (173), Expect = 1e-13
 Identities = 35/100 (35%), Positives = 58/100 (58%), Gaps = 1/100 (1%)
 Frame = +3

Query: 54  ASGVTVSDACKTTYEEIKKDKKHRYVVFYIRD-EKQIDVETVGERNAEYEQFLEDLQKGG 230
           ASG+ V D CK  + E+K  + HR++++ I + +KQ+ VE +GE    +E     L    
Sbjct: 5   ASGMAVHDDCKLKFMELKTKRTHRFIIYKIEELQKQVIVEKIGEPGQTHEDLAASLP--- 61

Query: 231 TGECRYGLFDFEYTHQCQGTSEASKKQKLFLMSWCPDTAK 350
             ECRY +FDF++      +SE   + ++F ++W PDTA+
Sbjct: 62  ADECRYAIFDFDFV-----SSEGVPRSRIFFVAWSPDTAR 96


>At3g03290.1 68416.m00326 universal stress protein (USP) family
           protein contains Pfam profile: PF00582 universal stress
           protein family
          Length = 274

 Score = 31.5 bits (68), Expect = 0.58
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = +3

Query: 168 ETVGERNAEYEQFLEDLQKGGTGE 239
           ET G+  +EYE+F E+ ++GG GE
Sbjct: 45  ETDGDSTSEYEEFEEEKERGGEGE 68


>At3g15070.1 68416.m01906 zinc finger (C3HC4-type RING finger)
           family protein similar to C-terminal zinc-finger
           [Glycine max] GI:558543; contains Pfam profile: PF00097
           zinc finger, C3HC4 type (RING finger)
          Length = 486

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 14/48 (29%), Positives = 23/48 (47%), Gaps = 3/48 (6%)
 Frame = -2

Query: 342 CPGTTTSGRASVSC*PPTCP---GTGACIQSQTGHICIPRYRPSADPR 208
           C G  + G +S+    P  P   G  A    ++G++C PRY  ++  R
Sbjct: 217 CNGNRSDGSSSLWSQAPAVPYMHGNIATGSIESGNVCFPRYHETSSSR 264


>At1g64430.1 68414.m07302 expressed protein
          Length = 559

 Score = 27.5 bits (58), Expect = 9.5
 Identities = 13/30 (43%), Positives = 17/30 (56%)
 Frame = -3

Query: 563 CRQGRSVGERVRFRRELVCKCCLLAIGGAE 474
           CR G S  E V F + + C  CL+AI  A+
Sbjct: 180 CRVGISPAEEVPFGKIVRCPSCLIAIAVAQ 209


  Database: arabidopsis
    Posted date:  Oct 4, 2007 10:56 AM
  Number of letters in database: 12,070,560
  Number of sequences in database:  28,952
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,534,630
Number of Sequences: 28952
Number of extensions: 253386
Number of successful extensions: 834
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 771
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 801
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1575119672
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)

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