Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0092
(700 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_40783| Best HMM Match : MH2 (HMM E-Value=0) 121 5e-28
SB_14476| Best HMM Match : MH1 (HMM E-Value=0) 120 9e-28
SB_12770| Best HMM Match : MH1 (HMM E-Value=0) 93 2e-19
SB_28109| Best HMM Match : No HMM Matches (HMM E-Value=.) 91 6e-19
SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45) 83 2e-16
SB_30592| Best HMM Match : MAM (HMM E-Value=2.66247e-44) 48 7e-06
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 31 0.90
SB_41109| Best HMM Match : No HMM Matches (HMM E-Value=.) 30 2.1
SB_4230| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_35111| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.7
SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.6
SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_28056| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_6917| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 4.8
SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59) 28 6.3
SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 28 8.4
SB_32890| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_31514| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7) 28 8.4
SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_34684| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 8.4
>SB_40783| Best HMM Match : MH2 (HMM E-Value=0)
Length = 494
Score = 121 bits (292), Expect = 5e-28
Identities = 57/104 (54%), Positives = 74/104 (71%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHC 180
E+A+S+ N +KCVTI R ++ +RKGLPHV+YCR+WRWP LQS HELKP++ C
Sbjct: 53 EKALSNPNQQSKCVTIARSLDGRLQVS--HRKGLPHVIYCRVWRWPDLQSHHELKPLECC 110
Query: 181 EYAYQLKKDEVCINPYHYNKIDSPALPPILVRRCSEGEVRAPPP 312
EYA+ LK+ EVCINPYHY++++SP V R SE R PPP
Sbjct: 111 EYAFGLKQKEVCINPYHYHRVESP------VPRQSE-YPRPPPP 147
Score = 32.7 bits (71), Expect = 0.29
Identities = 12/16 (75%), Positives = 13/16 (81%)
Frame = +2
Query: 593 PAFWCSISYYELNTRV 640
P WCSI+YYELN RV
Sbjct: 234 PLSWCSIAYYELNNRV 249
>SB_14476| Best HMM Match : MH1 (HMM E-Value=0)
Length = 131
Score = 120 bits (290), Expect = 9e-28
Identities = 47/84 (55%), Positives = 66/84 (78%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHC 180
E+AI++ TKCVTIPR ++ +RKGLPHV+YCRLWRWP LQS HEL+P++ C
Sbjct: 40 EKAITNPGVATKCVTIPRSLDGRLQVS--HRKGLPHVIYCRLWRWPDLQSHHELRPIEAC 97
Query: 181 EYAYQLKKDEVCINPYHYNKIDSP 252
E+A+ LKK+EVC+NP+HY ++++P
Sbjct: 98 EFAFSLKKEEVCVNPFHYQRVETP 121
>SB_12770| Best HMM Match : MH1 (HMM E-Value=0)
Length = 376
Score = 93.1 bits (221), Expect = 2e-19
Identities = 41/91 (45%), Positives = 57/91 (62%)
Frame = +1
Query: 31 TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAYQLKKDE 210
+KCVTI R + + RKG PHV+Y RLWRWP +Q E+K +D C + Y LK +
Sbjct: 78 SKCVTIQRTL--DGRLQVCERKGFPHVIYARLWRWPDIQKM-EMKHLDFCRFGYDLKYES 134
Query: 211 VCINPYHYNKIDSPALPPILVRRCSEGEVRA 303
VC+NPYHY +I SP +++R+ E V+A
Sbjct: 135 VCVNPYHYERIRSPTGKSVILRQEQEATVKA 165
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 AISSQN-SHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCE 183
AI+S+ + +KCVT+PR + G+ +K PHV+Y RLWRWP + E++ ++C+
Sbjct: 296 AITSKGRTASKCVTVPRTMDGRLQV-GE-KKDFPHVIYARLWRWPDVHKM-EMRHKEYCQ 352
Query: 184 YAYQLKKDEVCINPYHYNKIDSP 252
+ Y LK ++VC+NPYHY+++ P
Sbjct: 353 FGYDLKNEKVCVNPYHYDRVQPP 375
>SB_28109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 379
Score = 91.5 bits (217), Expect = 6e-19
Identities = 40/83 (48%), Positives = 57/83 (68%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 AISSQNSH-TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCE 183
AI+S +H +KCVTI R + G RKG PHV+Y R+WRWP L ++EL+ V +C+
Sbjct: 55 AITSAGTHPSKCVTIQRTLDGRLQVAG--RKGFPHVIYARIWRWPDLH-KNELRHVKYCQ 111
Query: 184 YAYQLKKDEVCINPYHYNKIDSP 252
+A+ LK D VC+NP+HY ++ SP
Sbjct: 112 FAFDLKCDSVCVNPFHYERVVSP 134
>SB_14778| Best HMM Match : MH1 (HMM E-Value=2.8026e-45)
Length = 1133
Score = 83.4 bits (197), Expect = 2e-16
Identities = 34/83 (40%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Frame = +1
Query: 7 AISSQN-SHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCE 183
AI+S+ + +KCVT+PR + G+ +K PHV+Y RLWRWP + E++ ++C+
Sbjct: 116 AITSKGRTASKCVTVPRTMDGRLQV-GE-KKDFPHVIYARLWRWPDVHKM-EMRHKEYCQ 172
Query: 184 YAYQLKKDEVCINPYHYNKIDSP 252
+ Y LK ++VC+NPYHY+++ P
Sbjct: 173 FGYDLKNEKVCVNPYHYDRVQPP 195
>SB_30592| Best HMM Match : MAM (HMM E-Value=2.66247e-44)
Length = 667
Score = 48.0 bits (109), Expect = 7e-06
Identities = 23/47 (48%), Positives = 30/47 (63%)
Frame = +1
Query: 103 PHVVYCRLWRWPQLQSQHELKPVDHCEYAYQLKKDEVCINPYHYNKI 243
PHVV R +R P +QS +ELKP+ C K VCINP+HY++I
Sbjct: 149 PHVVLYRTFREPNVQSSNELKPLAICSRRDSTGK-RVCINPHHYSEI 194
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 31.1 bits (67), Expect = 0.90
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 6/56 (10%)
Frame = +1
Query: 184 YAYQLKKDEVCINPYHYNKIDSPALPP---ILVRRCSEGE---VRAPPPYADYHQP 333
Y YQL K VC+ Y N+ P PP L CS G+ + PPP + P
Sbjct: 581 YVYQLPKTPVCMLRYCGNRGSLPPPPPPVHFLSNSCSPGDPLVLERPPPRWSSNSP 636
>SB_41109| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 135
Score = 29.9 bits (64), Expect = 2.1
Identities = 16/43 (37%), Positives = 22/43 (51%)
Frame = +1
Query: 499 PMDHNDNMNLTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
P+D N TR P P L + P+ Y + G+L Q+ LRA
Sbjct: 24 PLDFKSNALTTR-PPQPWVLRITSFPICYFDQGLLKQNAALRA 65
>SB_4230| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 499 PMDHNDNMNLTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
P+D N TR P P L + P+ Y + G+ Q++ LRA
Sbjct: 15 PLDFESNALTTR-PPQPWVLKIASFPIYYFDQGLFKQNEALRA 56
>SB_35111| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 29.5 bits (63), Expect = 2.7
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 499 PMDHNDNMNLTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
P+D N TR P P L + P+ Y + G+ Q++ LRA
Sbjct: 15 PLDFESNALTTR-PPQPWVLKIASFPIYYFDQGLFKQNEALRA 56
>SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 29.1 bits (62), Expect = 3.6
Identities = 26/85 (30%), Positives = 36/85 (42%), Gaps = 6/85 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 93 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 151
Query: 193 QLKKDEVCINPYHYNKIDSPALPPI 267
QL K VC Y N++ P PP+
Sbjct: 152 QLPKTPVCWLRYCGNRVSLPPPPPV 176
>SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.7 bits (61), Expect = 4.8
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 48 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNNIK-VRNCGGFYVY 106
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 107 QLPKTPVCWLRYCGNRVSLPPPPP 130
>SB_28056| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 499 PMDHNDNMNLTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
P+D N +LT P P + P+ Y + G+L Q + LRA
Sbjct: 15 PLDFESN-DLTTRPPQPWVFKIASFPLCYFDQGLLKQKEALRA 56
>SB_6917| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 88
Score = 28.7 bits (61), Expect = 4.8
Identities = 15/43 (34%), Positives = 22/43 (51%)
Frame = +1
Query: 499 PMDHNDNMNLTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
P+D N +LT P P + P+ Y + G+L Q + LRA
Sbjct: 15 PLDFESN-DLTTRPPQPWVFKIASFPLCYFDQGLLKQKEALRA 56
>SB_28212| Best HMM Match : C1_3 (HMM E-Value=0.59)
Length = 218
Score = 28.3 bits (60), Expect = 6.3
Identities = 11/34 (32%), Positives = 16/34 (47%)
Frame = -2
Query: 462 LHC*GAHVYSCVARHVLCKCSLEIQCAVSCTRLH 361
+HC V CVA V+ + C V+C +H
Sbjct: 1 MHCVACRVMRCVACRVMRCVGCRVMCCVACFVMH 34
>SB_56178| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 632
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/29 (44%), Positives = 15/29 (51%)
Frame = +1
Query: 175 HCEYAYQLKKDEVCINPYHYNKIDSPALP 261
HC QLKKD + Y+Y D P LP
Sbjct: 358 HCR-KIQLKKDSTSTHVYNYIPCDHPGLP 385
>SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 48 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 106
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 107 QLPKTPVCWLRYCGNRVSLPPPPP 130
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 6/89 (6%)
Frame = +1
Query: 31 TKCVTIPRVKPNESGINGQYRKGLPHVVY----CRLWRWPQLQSQHELKPVDHCE--YAY 192
T+CV + R + G GL + + C W + + +K V +C Y Y
Sbjct: 238 TRCVPVKRCGTHAPGWMVGSHPGLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 296
Query: 193 QLKKDEVCINPYHYNKIDSPALPPILVRR 279
QL K VC+ Y N+ P PP RR
Sbjct: 297 QLPKTPVCMLRYCGNRGSLPPPPPPECRR 325
>SB_32890| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 526 LTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
LT P P L + P+ Y + G+L Q++ LRA
Sbjct: 23 LTTRPPQPWVLKIASFPICYFDQGLLKQNEALRA 56
>SB_31514| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 526 LTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
LT P P L + P+ Y + G+L Q++ LRA
Sbjct: 23 LTTRPPQPWVLKIASFPICYFDQGLLKQNEALRA 56
>SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 48 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 106
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 107 QLPKTPVCWLRYCGNRVSLPPPPP 130
>SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7)
Length = 252
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 169 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 227
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 228 QLPKTPVCWLRYCGNRVSLPPPPP 251
>SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 3 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 61
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 62 QLPKTPVCWLRYCGNRVSLPPPPP 85
>SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 63 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 121
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 122 QLPKTPVCWLRYCGNRVSLPPPPP 145
>SB_34684| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 83
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +1
Query: 526 LTRLSPSPGGLXXEASPVLYHEPGVLVQHQLLRA 627
LT P P L + P+ Y + G+L Q++ LRA
Sbjct: 23 LTTRPPQPWVLKIASFPICYFDQGLLKQNEALRA 56
>SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 27.9 bits (59), Expect = 8.4
Identities = 26/84 (30%), Positives = 35/84 (41%), Gaps = 6/84 (7%)
Frame = +1
Query: 31 TKCVTIPRVKPNESG-INGQY---RKGLPHVVYCRLWRWPQLQSQHELKPVDHCE--YAY 192
T CV + R + G I G + R L C W + + +K V +C Y Y
Sbjct: 169 TSCVPVKRCGTHAPGWIVGSHPSLRYSLVTRKVCYHWSGSCCRWSNYIK-VRNCGGFYVY 227
Query: 193 QLKKDEVCINPYHYNKIDSPALPP 264
QL K VC Y N++ P PP
Sbjct: 228 QLPKTPVCWLRYCGNRVSLPPPPP 251
>SB_11521| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 953
Score = 27.9 bits (59), Expect = 8.4
Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)
Frame = +1
Query: 307 PPYADYHQP--ILHEHPDVAMQSGTGHSALYLEATLAQHVPGN 429
P Y +H P H P G++ +++ A HVPGN
Sbjct: 832 PGYTTHHVPGNTAHHVPGNTTHHVPGNTTYHVQGNTAHHVPGN 874
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.316 0.135 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,384,135
Number of Sequences: 59808
Number of extensions: 480937
Number of successful extensions: 1514
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1304
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1505
length of database: 16,821,457
effective HSP length: 80
effective length of database: 12,036,817
effective search space used: 1829596184
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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