Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0092
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U34778-1|AAA97606.1| 418|Caenorhabditis elegans sma-2 protein. 106 1e-23
U10327-1|AAC46583.1| 418|Caenorhabditis elegans MAD homolog 1 p... 106 1e-23
M98552-8|AAA28204.3| 418|Caenorhabditis elegans Small protein 2... 106 1e-23
U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer ... 91 7e-19
U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer ... 91 7e-19
AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein. 91 7e-19
U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein. 89 3e-18
U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3... 89 3e-18
U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer ... 84 8e-17
U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein. 69 2e-12
U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4... 69 2e-12
Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical pr... 50 1e-06
Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical p... 36 0.037
Z75540-7|CAB70215.2| 415|Caenorhabditis elegans Hypothetical pr... 36 0.037
U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical pr... 29 2.4
U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical pr... 29 2.4
U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical p... 29 4.2
AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical... 29 4.2
Z83731-4|CAB06021.2| 471|Caenorhabditis elegans Hypothetical pr... 27 9.8
AM498742-1|CAM58448.1| 471|Caenorhabditis elegans MAP kinase pr... 27 9.8
>U34778-1|AAA97606.1| 418|Caenorhabditis elegans sma-2 protein.
Length = 418
Score = 106 bits (255), Expect = 1e-23
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +1
Query: 31 TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAYQLKKDE 210
T+CVTIPR I+ +RK LPHV+YCR++RWP LQS HELK ++ C + Y+ + +
Sbjct: 60 TECVTIPRSLDGRLQIS--HRKALPHVIYCRVYRWPDLQSHHELKAIEDCRFCYESGQKD 117
Query: 211 VCINPYHYNKIDSP-ALPPILVRRCSEGEVRAPPP 312
+CINPYHY ++ + LPP+LV R SE + PP
Sbjct: 118 ICINPYHYKRVHATGVLPPVLVPRYSEKPPQEVPP 152
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 599 FWCSISYYELNTRVXGDV 652
FW ++SYYELNTRV V
Sbjct: 221 FWATVSYYELNTRVGEQV 238
>U10327-1|AAC46583.1| 418|Caenorhabditis elegans MAD homolog 1
protein.
Length = 418
Score = 106 bits (255), Expect = 1e-23
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +1
Query: 31 TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAYQLKKDE 210
T+CVTIPR I+ +RK LPHV+YCR++RWP LQS HELK ++ C + Y+ + +
Sbjct: 60 TECVTIPRSLDGRLQIS--HRKALPHVIYCRVYRWPDLQSHHELKAIEDCRFCYESGQKD 117
Query: 211 VCINPYHYNKIDSP-ALPPILVRRCSEGEVRAPPP 312
+CINPYHY ++ + LPP+LV R SE + PP
Sbjct: 118 ICINPYHYKRVHATGVLPPVLVPRYSEKPPQEVPP 152
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 599 FWCSISYYELNTRVXGDV 652
FW ++SYYELNTRV V
Sbjct: 221 FWATVSYYELNTRVGEQV 238
>M98552-8|AAA28204.3| 418|Caenorhabditis elegans Small protein 2
protein.
Length = 418
Score = 106 bits (255), Expect = 1e-23
Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Frame = +1
Query: 31 TKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAYQLKKDE 210
T+CVTIPR I+ +RK LPHV+YCR++RWP LQS HELK ++ C + Y+ + +
Sbjct: 60 TECVTIPRSLDGRLQIS--HRKALPHVIYCRVYRWPDLQSHHELKAIEDCRFCYESGQKD 117
Query: 211 VCINPYHYNKIDSP-ALPPILVRRCSEGEVRAPPP 312
+CINPYHY ++ + LPP+LV R SE + PP
Sbjct: 118 ICINPYHYKRVHATGVLPPVLVPRYSEKPPQEVPP 152
Score = 31.9 bits (69), Expect = 0.45
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = +2
Query: 599 FWCSISYYELNTRVXGDV 652
FW ++SYYELNTRV V
Sbjct: 221 FWATVSYYELNTRVGEQV 238
>U50197-7|AAM54189.1| 796|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform c protein.
Length = 796
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/108 (37%), Positives = 66/108 (61%)
Frame = +1
Query: 10 ISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYA 189
+S +T C+TIPR ++G RKG PHVVY +LWR+ ++ +++E + VDHC++A
Sbjct: 171 LSKGTKYTGCITIPRTLDGRLQVHG--RKGFPHVVYGKLWRFNEM-TKNETRHVDHCKHA 227
Query: 190 YQLKKDEVCINPYHYNKIDSPALPPILVRRCSEGEVRAPPPYADYHQP 333
+++K D VC+NPYHY + + ++V + PPP+ YH P
Sbjct: 228 FEMKSDMVCVNPYHYEIV----IGTMIVGQRDHDNRDMPPPHQRYHTP 271
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Frame = +1
Query: 46 IPRVKPNESGINGQYRKGLPHVVY-CRLWRWPQLQSQHELKPVDHCEYAYQLKK-DEVCI 219
+P P+ G++ Y P Y + PQ+ ++ P H Y
Sbjct: 318 LPHQAPHNPGVSHPYSIA-PQTHYPLNMNPIPQMPQMPQMPPPLHQGYGMNGPSCSSENN 376
Query: 220 NPYHYNK-IDSPALPPILVRRCSEGEVRAPPPYADYHQPILHEHPDVAMQSGTGHSA 387
NP+H N + + P C P PY D+H P ++ P Q H++
Sbjct: 377 NPFHQNHHYNDISHPNHYSYDCGPNLYGFPTPYPDFHHP-FNQQPHQPPQLSQNHTS 432
>U50197-6|AAK68348.1| 892|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform a protein.
Length = 892
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/108 (37%), Positives = 66/108 (61%)
Frame = +1
Query: 10 ISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYA 189
+S +T C+TIPR ++G RKG PHVVY +LWR+ ++ +++E + VDHC++A
Sbjct: 267 LSKGTKYTGCITIPRTLDGRLQVHG--RKGFPHVVYGKLWRFNEM-TKNETRHVDHCKHA 323
Query: 190 YQLKKDEVCINPYHYNKIDSPALPPILVRRCSEGEVRAPPPYADYHQP 333
+++K D VC+NPYHY + + ++V + PPP+ YH P
Sbjct: 324 FEMKSDMVCVNPYHYEIV----IGTMIVGQRDHDNRDMPPPHQRYHTP 367
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Frame = +1
Query: 46 IPRVKPNESGINGQYRKGLPHVVY-CRLWRWPQLQSQHELKPVDHCEYAYQLKK-DEVCI 219
+P P+ G++ Y P Y + PQ+ ++ P H Y
Sbjct: 414 LPHQAPHNPGVSHPYSIA-PQTHYPLNMNPIPQMPQMPQMPPPLHQGYGMNGPSCSSENN 472
Query: 220 NPYHYNK-IDSPALPPILVRRCSEGEVRAPPPYADYHQPILHEHPDVAMQSGTGHSA 387
NP+H N + + P C P PY D+H P ++ P Q H++
Sbjct: 473 NPFHQNHHYNDISHPNHYSYDCGPNLYGFPTPYPDFHHP-FNQQPHQPPQLSQNHTS 528
>AF005205-1|AAB61748.1| 796|Caenorhabditis elegans DAF-3 protein.
Length = 796
Score = 91.1 bits (216), Expect = 7e-19
Identities = 41/108 (37%), Positives = 66/108 (61%)
Frame = +1
Query: 10 ISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYA 189
+S +T C+TIPR ++G RKG PHVVY +LWR+ ++ +++E + VDHC++A
Sbjct: 171 LSKGTKYTGCITIPRTLDGRLQVHG--RKGFPHVVYGKLWRFNEM-TKNETRHVDHCKHA 227
Query: 190 YQLKKDEVCINPYHYNKIDSPALPPILVRRCSEGEVRAPPPYADYHQP 333
+++K D VC+NPYHY + + ++V + PPP+ YH P
Sbjct: 228 FEMKSDMVCVNPYHYEIV----IGTMIVGQRDHDNRDMPPPHQRYHTP 271
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Frame = +1
Query: 46 IPRVKPNESGINGQYRKGLPHVVY-CRLWRWPQLQSQHELKPVDHCEYAYQLKK-DEVCI 219
+P P+ G++ Y P Y + PQ+ ++ P H Y
Sbjct: 318 LPHQAPHNPGVSHPYSIA-PQTHYPLNMNPIPQMPQMPQMPPPLHQGYGMNGPSCSSENN 376
Query: 220 NPYHYNK-IDSPALPPILVRRCSEGEVRAPPPYADYHQPILHEHPDVAMQSGTGHSA 387
NP+H N + + P C P PY D+H P ++ P Q H++
Sbjct: 377 NPFHQNHHYNDISHPNHYSYDCGPNLYGFPTPYPDFHHP-FNQQPHQPPQLSQNHTS 432
>U34902-1|AAA97607.1| 393|Caenorhabditis elegans sma-3 protein.
Length = 393
Score = 89.0 bits (211), Expect = 3e-18
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHC 180
E +++ ++++C+TI K + + ++KGLPHV+YCR+WRWP + S HEL+ +D C
Sbjct: 53 ECVLANPCTNSRCITI--AKSLDGRLQVSHKKGLPHVIYCRVWRWPDISSPHELRSIDTC 110
Query: 181 EYAYQ--LKKDEVCINPYHYNKIDSP 252
Y Y+ K +CINPYHY ++ P
Sbjct: 111 SYPYESSSKTMYICINPYHYQRLSRP 136
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 593 PAFWCSISYYELNTRVXGDVSRL 661
P W I+Y+ELN+RV G+V +L
Sbjct: 194 PKSWAQITYFELNSRV-GEVFKL 215
>U00046-9|AAC47050.2| 393|Caenorhabditis elegans Small protein 3
protein.
Length = 393
Score = 89.0 bits (211), Expect = 3e-18
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Frame = +1
Query: 1 ERAISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHC 180
E +++ ++++C+TI K + + ++KGLPHV+YCR+WRWP + S HEL+ +D C
Sbjct: 53 ECVLANPCTNSRCITI--AKSLDGRLQVSHKKGLPHVIYCRVWRWPDISSPHELRSIDTC 110
Query: 181 EYAYQ--LKKDEVCINPYHYNKIDSP 252
Y Y+ K +CINPYHY ++ P
Sbjct: 111 SYPYESSSKTMYICINPYHYQRLSRP 136
Score = 28.3 bits (60), Expect = 5.6
Identities = 12/23 (52%), Positives = 17/23 (73%)
Frame = +2
Query: 593 PAFWCSISYYELNTRVXGDVSRL 661
P W I+Y+ELN+RV G+V +L
Sbjct: 194 PKSWAQITYFELNSRV-GEVFKL 215
>U50197-5|AAM54188.1| 864|Caenorhabditis elegans Abnormal dauer
formation protein3, isoform b protein.
Length = 864
Score = 84.2 bits (199), Expect = 8e-17
Identities = 41/114 (35%), Positives = 67/114 (58%), Gaps = 6/114 (5%)
Frame = +1
Query: 10 ISSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYA 189
+S +T C+TIPR ++G RKG PHVVY +LWR+ ++ +++E + VDHC++A
Sbjct: 233 LSKGTKYTGCITIPRTLDGRLQVHG--RKGFPHVVYGKLWRFNEM-TKNETRHVDHCKHA 289
Query: 190 YQLKKD------EVCINPYHYNKIDSPALPPILVRRCSEGEVRAPPPYADYHQP 333
+++K D +VC+NPYHY + + ++V + PPP+ YH P
Sbjct: 290 FEMKSDMVGEALQVCVNPYHYEIV----IGTMIVGQRDHDNRDMPPPHQRYHTP 339
Score = 27.9 bits (59), Expect = 7.4
Identities = 26/117 (22%), Positives = 42/117 (35%), Gaps = 3/117 (2%)
Frame = +1
Query: 46 IPRVKPNESGINGQYRKGLPHVVY-CRLWRWPQLQSQHELKPVDHCEYAYQLKK-DEVCI 219
+P P+ G++ Y P Y + PQ+ ++ P H Y
Sbjct: 386 LPHQAPHNPGVSHPYSIA-PQTHYPLNMNPIPQMPQMPQMPPPLHQGYGMNGPSCSSENN 444
Query: 220 NPYHYNK-IDSPALPPILVRRCSEGEVRAPPPYADYHQPILHEHPDVAMQSGTGHSA 387
NP+H N + + P C P PY D+H P ++ P Q H++
Sbjct: 445 NPFHQNHHYNDISHPNHYSYDCGPNLYGFPTPYPDFHHP-FNQQPHQPPQLSQNHTS 500
>U34596-1|AAA97605.1| 570|Caenorhabditis elegans SMA-4 protein.
Length = 570
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +1
Query: 13 SSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAY 192
S+ T CVTI R + G RKG+PHVVY R+WRWP++ S++EL + C+ +
Sbjct: 195 SNGKQPTGCVTIQRSLDGRLQVAG--RKGVPHVVYARIWRWPKV-SKNELVKLVQCQTSS 251
Query: 193 QLKKDEVCINPYHYNKIDS 249
D +CINPYHY ++ S
Sbjct: 252 D-HPDNICINPYHYERVVS 269
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 602 WCSISYYELNTRVXGDVSRLXTFHHGRRI 688
WCSI YYEL+T + G+ ++ HG+ I
Sbjct: 350 WCSIIYYELDTPI-GETFKVSARDHGKVI 377
>U00066-5|AAA50739.2| 565|Caenorhabditis elegans Small protein 4,
isoform a protein.
Length = 565
Score = 69.3 bits (162), Expect = 2e-12
Identities = 34/79 (43%), Positives = 48/79 (60%)
Frame = +1
Query: 13 SSQNSHTKCVTIPRVKPNESGINGQYRKGLPHVVYCRLWRWPQLQSQHELKPVDHCEYAY 192
S+ T CVTI R + G RKG+PHVVY R+WRWP++ S++EL + C+ +
Sbjct: 190 SNGKQPTGCVTIQRSLDGRLQVAG--RKGVPHVVYARIWRWPKV-SKNELVKLVQCQTSS 246
Query: 193 QLKKDEVCINPYHYNKIDS 249
D +CINPYHY ++ S
Sbjct: 247 D-HPDNICINPYHYERVVS 264
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/29 (44%), Positives = 19/29 (65%)
Frame = +2
Query: 602 WCSISYYELNTRVXGDVSRLXTFHHGRRI 688
WCSI YYEL+T + G+ ++ HG+ I
Sbjct: 345 WCSIIYYELDTPI-GETFKVSARDHGKVI 372
>Z75546-1|CAA99889.1| 546|Caenorhabditis elegans Hypothetical
protein R05D11.1 protein.
Length = 546
Score = 50.4 bits (115), Expect = 1e-06
Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 5/85 (5%)
Frame = +1
Query: 121 RLWRWPQLQSQHELKPVDHCEYAYQLKKDEVCINPYHYNKIDSPA--LPPILVRR---CS 285
R +R+P ++ + ++K + C +A+ VC+NPYHY ++ P +PPI+V +
Sbjct: 91 RAFRFPVIRYESQVKSILTCRHAFNSHSRNVCLNPYHYRWVELPTCQVPPIIVNKELDYG 150
Query: 286 EGEVRAPPPYADYHQPILHEHPDVA 360
E +R D++Q L E VA
Sbjct: 151 EPPIRTEDALDDWNQKDLKEEQVVA 175
>Z79600-12|CAB70221.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +1
Query: 118 CRLWRWPQLQ---SQHELKPVDHCEYAYQLKKDEV--CINPYHY 234
C+LWRW LQ + H L+ + C + + C NPYHY
Sbjct: 102 CKLWRWKDLQVDAALHRLEALPWCRFGRVTINNATVSCCNPYHY 145
>Z75540-7|CAB70215.2| 415|Caenorhabditis elegans Hypothetical
protein F37D6.6 protein.
Length = 415
Score = 35.5 bits (78), Expect = 0.037
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 5/44 (11%)
Frame = +1
Query: 118 CRLWRWPQLQ---SQHELKPVDHCEYAYQLKKDEV--CINPYHY 234
C+LWRW LQ + H L+ + C + + C NPYHY
Sbjct: 102 CKLWRWKDLQVDAALHRLEALPWCRFGRVTINNATVSCCNPYHY 145
>U39853-8|AAQ81277.1| 1609|Caenorhabditis elegans Hypothetical protein
F13B9.1c protein.
Length = 1609
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 214 TPRPSSAGMHTRNGPLASVHVGSVTEANAR 125
TP+P+ H N P+ SVH G ++NA+
Sbjct: 1282 TPQPTQTVKHLENKPVPSVHQGYDLQSNAQ 1311
>U39853-7|AAM54194.1| 1614|Caenorhabditis elegans Hypothetical protein
F13B9.1b protein.
Length = 1614
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 214 TPRPSSAGMHTRNGPLASVHVGSVTEANAR 125
TP+P+ H N P+ SVH G ++NA+
Sbjct: 1282 TPQPTQTVKHLENKPVPSVHQGYDLQSNAQ 1311
>U39853-6|AAM54193.2| 1632|Caenorhabditis elegans Hypothetical protein
F13B9.1a protein.
Length = 1632
Score = 29.5 bits (63), Expect = 2.4
Identities = 12/30 (40%), Positives = 18/30 (60%)
Frame = -1
Query: 214 TPRPSSAGMHTRNGPLASVHVGSVTEANAR 125
TP+P+ H N P+ SVH G ++NA+
Sbjct: 1304 TPQPTQTVKHLENKPVPSVHQGYDLQSNAQ 1333
>Z82051-10|CAB04822.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 131 RQSLQ*TTCGRPFLYCPLMPLSFGFTLGIVTHF 33
R++L + G FL L P SFG T G +THF
Sbjct: 127 RRTLISSFTGWNFLIWILYPSSFGVTFGFMTHF 159
>AL021175-11|CAA15973.2| 577|Caenorhabditis elegans Hypothetical
protein T23D5.2 protein.
Length = 577
Score = 28.7 bits (61), Expect = 4.2
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = -3
Query: 131 RQSLQ*TTCGRPFLYCPLMPLSFGFTLGIVTHF 33
R++L + G FL L P SFG T G +THF
Sbjct: 127 RRTLISSFTGWNFLIWILYPSSFGVTFGFMTHF 159
>Z83731-4|CAB06021.2| 471|Caenorhabditis elegans Hypothetical
protein M04C9.5 protein.
Length = 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 292 EVRAPPPYADYHQPILHEHPDVAMQSGTGHSAL 390
E+R+ PPY DY + P++ ++S + +S +
Sbjct: 156 EIRSKPPYTDYVSTRWYRAPEILLRSTSYNSPI 188
>AM498742-1|CAM58448.1| 471|Caenorhabditis elegans MAP kinase
protein.
Length = 471
Score = 27.5 bits (58), Expect = 9.8
Identities = 10/33 (30%), Positives = 20/33 (60%)
Frame = +1
Query: 292 EVRAPPPYADYHQPILHEHPDVAMQSGTGHSAL 390
E+R+ PPY DY + P++ ++S + +S +
Sbjct: 156 EIRSKPPYTDYVSTRWYRAPEILLRSTSYNSPI 188
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.316 0.135 0.426
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,779,492
Number of Sequences: 27780
Number of extensions: 333806
Number of successful extensions: 873
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 790
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 851
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)
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