Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0091
         (600 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p pro...    34   0.17 
BT001282-1|AAN71038.1|  491|Drosophila melanogaster AT07931p pro...    34   0.17 
AY134669-1|AAN39118.1|  968|Drosophila melanogaster peptidylprol...    34   0.17 
AY051595-1|AAK93019.1|  685|Drosophila melanogaster GH23813p pro...    34   0.17 
AE014297-4231|AAF56787.2|  685|Drosophila melanogaster CG1866-PB...    34   0.17 
AE014297-4230|AAF56786.1|  970|Drosophila melanogaster CG1866-PA...    34   0.17 
BT015192-1|AAT94421.1|  535|Drosophila melanogaster RH06321p pro...    30   2.8  
AE014298-3076|AAN09528.1|  128|Drosophila melanogaster CG32510-P...    29   6.4  

>BT001578-1|AAN71333.1| 1002|Drosophila melanogaster RE23622p
           protein.
          Length = 1002

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 809 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 863


>BT001282-1|AAN71038.1|  491|Drosophila melanogaster AT07931p
           protein.
          Length = 491

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 298 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 352


>AY134669-1|AAN39118.1|  968|Drosophila melanogaster peptidylprolyl
           cis-trans isomerase protein.
          Length = 968

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 775 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 829


>AY051595-1|AAK93019.1|  685|Drosophila melanogaster GH23813p
           protein.
          Length = 685

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 492 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 546


>AE014297-4231|AAF56787.2|  685|Drosophila melanogaster CG1866-PB,
           isoform B protein.
          Length = 685

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 492 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 546


>AE014297-4230|AAF56786.1|  970|Drosophila melanogaster CG1866-PA,
           isoform A protein.
          Length = 970

 Score = 33.9 bits (74), Expect = 0.17
 Identities = 16/55 (29%), Positives = 30/55 (54%)
 Frame = -2

Query: 536 KXRRETSGRRGEDISSGQGERAGGHRSRQACGRLGHRTRTQPAAEGRQRTNRSEA 372
           + R+E+SGRR +D    +   + G+R  ++ GR    +R++  +  R R  RS +
Sbjct: 777 RRRQESSGRRRQDSDGRRRRESSGNRRSRSRGRWHSSSRSRSPSTSRSRRRRSRS 831


>BT015192-1|AAT94421.1|  535|Drosophila melanogaster RH06321p
           protein.
          Length = 535

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 2/71 (2%)
 Frame = -1

Query: 504 RGH*QRSGRARG--RPPKSSSMWPTWPPDSNSASSRRSTAH*PKRGR*EMTSPVSSDDAT 331
           R H   +G   G   P   S  WPT    S   +++R  AH P  GR     P S+ +A 
Sbjct: 434 RNHAAIAGPVSGANHPNAGSLRWPTGGTQSRPGTTKRGAAHAPAAGR---LGP-SASEAH 489

Query: 330 LKRKSYRVISF 298
           + R   R I F
Sbjct: 490 IHRTQDRQIRF 500


>AE014298-3076|AAN09528.1|  128|Drosophila melanogaster CG32510-PA
           protein.
          Length = 128

 Score = 28.7 bits (61), Expect = 6.4
 Identities = 12/31 (38%), Positives = 16/31 (51%)
 Frame = -2

Query: 521 TSGRRGEDISSGQGERAGGHRSRQACGRLGH 429
           + G RG+D+       A GH   +  GRLGH
Sbjct: 3   SEGGRGDDLQGHVDGGAQGHEEGEGTGRLGH 33


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,201,004
Number of Sequences: 53049
Number of extensions: 417310
Number of successful extensions: 1335
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1300
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1330
length of database: 24,988,368
effective HSP length: 81
effective length of database: 20,691,399
effective search space used: 2441585082
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)