Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0090
         (413 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35 pro...   115   7e-26
CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.               115   7e-26
BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35 p...   115   7e-26
BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35 p...   115   7e-26
BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35 p...   115   7e-26
AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35 p...   115   7e-26
BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.       113   2e-25
AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35 p...    62   7e-10
AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35 p...    51   2e-06

>U12465-1|AAA51648.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>CR456877-1|CAG33158.1|  123|Homo sapiens RPL35 protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC094828-1|AAH94828.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC071915-1|AAH71915.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC000348-1|AAH00348.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>AL354928-8|CAI39639.1|  123|Homo sapiens ribosomal protein L35
           protein.
          Length = 123

 Score =  115 bits (276), Expect = 7e-26
 Identities = 59/93 (63%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAVKA
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVKA 123


>BC010919-1|AAH10919.1|  123|Homo sapiens RPL35 protein protein.
          Length = 123

 Score =  113 bits (273), Expect = 2e-25
 Identities = 58/93 (62%), Positives = 67/93 (72%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYKNXKYKPLXLXAXKTRA 277
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK  KYKPL L   KTRA
Sbjct: 31  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYKGKKYKPLDLRPKKTRA 90

Query: 278 MRKAXTKHEAXIKTRKEIRXKSLFPPRVYAVKA 376
           MR+   KHE  +KT+K+ R + L+P R YAV+A
Sbjct: 91  MRRRLNKHEENLKTKKQQRKERLYPLRKYAVRA 123


>AL354928-7|CAI39638.1|   95|Homo sapiens ribosomal protein L35
           protein.
          Length = 95

 Score = 62.1 bits (144), Expect = 7e-10
 Identities = 32/44 (72%), Positives = 34/44 (77%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQKMKVNLRNHYK 229
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q  K NLR  YK
Sbjct: 30  LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQTQKENLRKFYK 73


>AB046409-1|BAB21255.1|   33|Homo sapiens ribosomal protein L35
           protein.
          Length = 33

 Score = 50.8 bits (116), Expect = 2e-06
 Identities = 26/33 (78%), Positives = 28/33 (84%)
 Frame = +2

Query: 98  LRVAKVTGGVASKLSKIRVVRKAXARVYIVYHQ 196
           LRVAKVTGG ASKLSKIRVVRK+ ARV  V +Q
Sbjct: 1   LRVAKVTGGAASKLSKIRVVRKSIARVLTVINQ 33


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 36,456,103
Number of Sequences: 237096
Number of extensions: 420770
Number of successful extensions: 647
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 644
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 647
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3087725076
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)