Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0088
(750 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g66240.2 68418.m08345 transducin family protein / WD-40 repea... 184 4e-47
At5g66240.1 68418.m08344 transducin family protein / WD-40 repea... 184 4e-47
At5g14530.1 68418.m01703 transducin family protein / WD-40 repea... 182 2e-46
At5g08390.1 68418.m00988 transducin family protein / WD-40 repea... 66 3e-11
At5g23430.2 68418.m02749 transducin family protein / WD-40 repea... 65 4e-11
At5g23430.1 68418.m02748 transducin family protein / WD-40 repea... 65 4e-11
At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p... 64 1e-10
At4g02730.1 68417.m00372 transducin family protein / WD-40 repea... 62 5e-10
At5g25150.1 68418.m02981 transducin family protein / WD-40 repea... 58 5e-09
At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic regul... 58 6e-09
At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic regul... 58 6e-09
At5g67320.1 68418.m08490 WD-40 repeat family protein strong simi... 58 8e-09
At3g49660.1 68416.m05427 transducin family protein / WD-40 repea... 58 8e-09
At1g73720.1 68414.m08536 transducin family protein / WD-40 repea... 58 8e-09
At5g56130.1 68418.m07002 transducin family protein / WD-40 repea... 55 6e-08
At2g41500.1 68415.m05127 WD-40 repeat family protein / small nuc... 55 6e-08
At2g33340.2 68415.m04087 transducin family protein / WD-40 repea... 53 2e-07
At2g33340.1 68415.m04086 transducin family protein / WD-40 repea... 53 2e-07
At3g21540.1 68416.m02717 transducin family protein / WD-40 repea... 52 3e-07
At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p... 52 4e-07
At5g16750.1 68418.m01961 transducin family protein / WD-40 repea... 50 2e-06
At5g64730.1 68418.m08140 transducin family protein / WD-40 repea... 49 3e-06
At4g29830.1 68417.m04246 transducin family protein / WD-40 repea... 49 3e-06
At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha... 49 4e-06
At1g71840.1 68414.m08302 transducin family protein / WD-40 repea... 48 7e-06
At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha... 48 7e-06
At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1 p... 46 2e-05
At1g04510.1 68414.m00442 transducin family protein / WD-40 repea... 46 3e-05
At3g44530.1 68416.m04786 transducin family protein / WD-40 repea... 46 4e-05
At1g52360.1 68414.m05909 coatomer protein complex, subunit beta ... 46 4e-05
At5g50230.1 68418.m06221 transducin family protein / WD-40 repea... 45 5e-05
At1g79990.1 68414.m09356 coatomer protein complex, subunit beta ... 45 5e-05
At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 ... 44 8e-05
At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 ... 44 8e-05
At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 ... 44 8e-05
At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 ... 44 8e-05
At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 ... 44 8e-05
At3g18140.1 68416.m02306 transducin family protein / WD-40 repea... 44 1e-04
At1g48630.1 68414.m05440 guanine nucleotide-binding family prote... 44 1e-04
At4g04940.1 68417.m00718 transducin family protein / WD-40 repea... 44 1e-04
At3g15980.3 68416.m02022 coatomer protein complex, subunit beta ... 44 1e-04
At3g15980.2 68416.m02021 coatomer protein complex, subunit beta ... 44 1e-04
At3g15980.1 68416.m02020 coatomer protein complex, subunit beta ... 44 1e-04
At2g46280.3 68415.m05757 eukaryotic translation initiation facto... 44 1e-04
At2g46280.2 68415.m05756 eukaryotic translation initiation facto... 44 1e-04
At2g46280.1 68415.m05755 eukaryotic translation initiation facto... 44 1e-04
At3g18130.1 68416.m02305 guanine nucleotide-binding family prote... 43 2e-04
At2g43770.1 68415.m05441 transducin family protein / WD-40 repea... 43 2e-04
At1g29260.1 68414.m03578 peroxisomal targeting signal type 2 rec... 43 2e-04
At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta... 43 3e-04
At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta... 43 3e-04
At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta... 43 3e-04
At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6 ... 43 3e-04
At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pf... 42 3e-04
At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pf... 42 3e-04
At3g27640.1 68416.m03452 transducin family protein / WD-40 repea... 42 3e-04
At2g22040.1 68415.m02617 transducin family protein / WD-40 repea... 42 3e-04
At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2 pro... 42 4e-04
At4g03020.1 68417.m00410 transducin family protein / WD-40 repea... 42 4e-04
At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pf... 42 4e-04
At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochro... 42 4e-04
At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochro... 42 4e-04
At5g50120.1 68418.m06207 transducin family protein / WD-40 repea... 42 6e-04
At4g35140.1 68417.m04996 transducin family protein / WD-40 repea... 42 6e-04
At1g18080.1 68414.m02238 WD-40 repeat family protein / auxin-dep... 42 6e-04
At1g10580.1 68414.m01192 transducin family protein / WD-40 repea... 42 6e-04
At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pf... 41 8e-04
At5g08560.1 68418.m01018 transducin family protein / WD-40 repea... 41 8e-04
At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogene... 41 8e-04
At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pf... 41 8e-04
At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pf... 41 8e-04
At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6 ... 40 0.001
At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1 pro... 40 0.001
At1g69400.2 68414.m07968 transducin family protein / WD-40 repea... 40 0.001
At1g69400.1 68414.m07969 transducin family protein / WD-40 repea... 40 0.001
At1g15440.2 68414.m01856 transducin family protein / WD-40 repea... 40 0.001
At1g15440.1 68414.m01855 transducin family protein / WD-40 repea... 40 0.001
At2g05720.1 68415.m00613 transducin family protein / WD-40 repea... 40 0.002
At5g43930.1 68418.m05374 transducin family protein / WD-40 repea... 40 0.002
At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pf... 40 0.002
At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pf... 40 0.002
At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless... 39 0.003
At2g46290.1 68415.m05758 eukaryotic translation initiation facto... 39 0.003
At1g15470.1 68414.m01860 transducin family protein / WD-40 repea... 39 0.004
At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1) ide... 38 0.007
At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pf... 38 0.009
At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6 ... 38 0.009
At1g04140.2 68414.m00404 transducin family protein / WD-40 repea... 38 0.009
At1g04140.1 68414.m00403 transducin family protein / WD-40 repea... 38 0.009
At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3 pro... 37 0.012
At4g05410.1 68417.m00823 transducin family protein / WD-40 repea... 37 0.012
At1g80670.1 68414.m09466 transducin family protein / WD-40 repea... 37 0.012
At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2 ... 37 0.012
At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4 pro... 37 0.016
At5g13480.1 68418.m01554 WD-40 repeat family protein similar to ... 37 0.016
At5g60940.2 68418.m07645 transducin family protein / WD-40 repea... 36 0.022
At5g60940.1 68418.m07644 transducin family protein / WD-40 repea... 36 0.022
At3g05090.2 68416.m00553 transducin family protein / WD-40 repea... 36 0.022
At3g05090.1 68416.m00552 transducin family protein / WD-40 repea... 36 0.022
At2g16405.1 68415.m01878 transducin family protein / WD-40 repea... 36 0.029
At1g24130.1 68414.m03044 transducin family protein / WD-40 repea... 36 0.038
At1g21650.1 68414.m02710 preprotein translocase secA family prot... 36 0.038
At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6 ... 35 0.050
At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochro... 35 0.050
At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5 ... 35 0.066
At4g35370.1 68417.m05025 transducin family protein / WD-40 repea... 35 0.066
At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase cyc... 35 0.066
At2g01330.1 68415.m00050 transducin family protein / WD-40 repea... 35 0.066
At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG) co... 34 0.088
At4g11270.1 68417.m01823 transducin family protein / WD-40 repea... 34 0.088
At4g34280.1 68417.m04873 transducin family protein / WD-40 repea... 34 0.12
At4g28450.1 68417.m04071 transducin family protein / WD-40 repea... 34 0.12
At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic c... 34 0.12
At1g24530.1 68414.m03088 transducin family protein / WD-40 repea... 34 0.12
At1g16160.1 68414.m01936 protein kinase family protein contains ... 34 0.12
At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 ... 33 0.15
At3g53390.1 68416.m05892 transducin family protein / WD-40 repea... 33 0.15
At2g37160.1 68415.m04559 transducin family protein / WD-40 repea... 33 0.15
At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5 ... 33 0.20
At5g27945.1 68418.m03364 transducin family protein / WD-40 repea... 33 0.20
At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5 ... 33 0.20
At3g42660.1 68416.m04436 transducin family protein / WD-40 repea... 33 0.20
At3g18060.1 68416.m02297 transducin family protein / WD-40 repea... 33 0.20
At3g15610.1 68416.m01980 transducin family protein / WD-40 repea... 33 0.20
At4g00090.1 68417.m00009 transducin family protein / WD-40 repea... 33 0.27
At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-rel... 33 0.27
At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4 ... 32 0.35
At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5 ... 32 0.35
At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pf... 32 0.35
At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pf... 32 0.35
At5g43920.1 68418.m05372 transducin family protein / WD-40 repea... 32 0.47
At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic c... 32 0.47
At2g26060.1 68415.m03129 transducin family protein / WD-40 repea... 32 0.47
At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6 ... 31 0.62
At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6 ... 31 0.62
At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6 ... 31 0.62
At4g18905.1 68417.m02787 transducin family protein / WD-40 repea... 31 0.62
At3g43890.1 68416.m04698 DC1 domain-containing protein contains ... 31 0.82
At3g06880.1 68416.m00817 transducin family protein / WD-40 repea... 31 0.82
At2g20330.1 68415.m02374 transducin family protein / WD-40 repea... 31 0.82
At2g19430.1 68415.m02267 transducin family protein / WD-40 repea... 31 0.82
At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5 ... 31 0.82
At5g11240.1 68418.m01313 transducin family protein / WD-40 repea... 31 1.1
At4g18900.1 68417.m02786 transducin family protein / WD-40 repea... 31 1.1
At3g49180.1 68416.m05375 transducin family protein / WD-40 repea... 31 1.1
At2g40360.1 68415.m04977 transducin family protein / WD-40 repea... 31 1.1
At2g26490.1 68415.m03178 transducin family protein / WD-40 repea... 31 1.1
At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 ... 30 1.4
At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 ... 30 1.4
At1g20540.1 68414.m02559 transducin family protein / WD-40 repea... 30 1.4
At5g64630.3 68418.m08123 transducin family protein / WD-40 repea... 30 1.9
At5g64630.2 68418.m08122 transducin family protein / WD-40 repea... 30 1.9
At5g64630.1 68418.m08121 transducin family protein / WD-40 repea... 30 1.9
At5g19920.1 68418.m02370 transducin family protein / WD-40 repea... 30 1.9
At4g32990.1 68417.m04692 transducin family protein / WD-40 repea... 30 1.9
At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 ... 30 1.9
At1g49450.1 68414.m05543 transducin family protein / WD-40 repea... 30 1.9
At1g30370.1 68414.m03713 lipase class 3 family protein similar t... 30 1.9
At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochro... 29 2.5
At3g10530.1 68416.m01264 transducin family protein / WD-40 repea... 29 2.5
At4g23260.1 68417.m03353 protein kinase family protein contains ... 29 3.3
At4g29860.1 68417.m04250 transducin family protein / WD-40 repea... 29 4.4
At2g19920.1 68415.m06036 RNA-dependent RNA polymerase family pro... 29 4.4
At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pf... 29 4.4
At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutas... 28 5.8
At3g51930.1 68416.m05696 transducin family protein / WD-40 repea... 28 5.8
At3g18950.1 68416.m02405 transducin family protein / WD-40 repea... 28 5.8
At2g02650.1 68415.m00204 reverse transcriptase-related similar t... 28 5.8
At1g80710.1 68414.m09470 transducin family protein / WD-40 repea... 28 5.8
At1g65180.1 68414.m07390 DC1 domain-containing protein contains ... 28 5.8
At1g27840.1 68414.m03412 transducin family protein / WD-40 repea... 28 5.8
At4g07410.1 68417.m01136 transducin family protein / WD-40 repea... 28 7.6
At3g54250.1 68416.m05996 mevalonate diphosphate decarboxylase, p... 28 7.6
At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 ... 28 7.6
At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 ... 28 7.6
At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10... 28 7.6
At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10... 28 7.6
>At5g66240.2 68418.m08345 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 331
Score = 184 bits (449), Expect = 4e-47
Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Frame = +2
Query: 98 MKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVN 277
++L +++++S + VFR+ +I+SIDF +++ S+DD I +YD T + T+N
Sbjct: 13 LELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTIN 72
Query: 278 SKKYGVDLIHFTHAKNTAIHSSTKV-DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE 454
SKKYGVDL+ FT T I+SS DD++R LSLHDNKY+RYF GH +VV++ L
Sbjct: 73 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 132
Query: 455 DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF 634
+ F+SGSLD+T+ LWD R CQGL+ + GRP AAYD +GLIFA I+++D R +
Sbjct: 133 ECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGG-YIRMFDARMY 191
Query: 635 DKGPFVTFKL 664
+KGPF F +
Sbjct: 192 EKGPFEIFSV 201
>At5g66240.1 68418.m08344 transducin family protein / WD-40 repeat
family protein contains Pfam PF00400: WD domain, G-beta
repeat (4 copies, 1 weak); similar to Will die slowly
protein. {Drosophila melanogaster} (SP:Q9V3J8)
{Drosophila melanogaster}
Length = 328
Score = 184 bits (449), Expect = 4e-47
Identities = 87/190 (45%), Positives = 126/190 (66%), Gaps = 1/190 (0%)
Frame = +2
Query: 98 MKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVN 277
++L +++++S + VFR+ +I+SIDF +++ S+DD I +YD T + T+N
Sbjct: 10 LELSEEIIQSMEPGAVFRDYNCRISSIDFHKTSTCMVTASDDDSIRLYDVASATCLKTIN 69
Query: 278 SKKYGVDLIHFTHAKNTAIHSSTKV-DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE 454
SKKYGVDL+ FT T I+SS DD++R LSLHDNKY+RYF GH +VV++ L
Sbjct: 70 SKKYGVDLVCFTSHPTTVIYSSRNGWDDSLRLLSLHDNKYLRYFKGHHDRVVSLSLCSGG 129
Query: 455 DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF 634
+ F+SGSLD+T+ LWD R CQGL+ + GRP AAYD +GLIFA I+++D R +
Sbjct: 130 ECFISGSLDRTVLLWDQRVEKCQGLLRVQGRPAAAYDDQGLIFAIAFGG-YIRMFDARMY 188
Query: 635 DKGPFVTFKL 664
+KGPF F +
Sbjct: 189 EKGPFEIFSV 198
>At5g14530.1 68418.m01703 transducin family protein / WD-40 repeat
family protein similar to Will die slowly protein
(SP:Q9V3J8) [Drosophila melanogaster] ; contains Pfam
PF00400: WD domain, G-beta repeat (4 copies, 1 weak)
Length = 330
Score = 182 bits (444), Expect = 2e-46
Identities = 82/194 (42%), Positives = 127/194 (65%), Gaps = 4/194 (2%)
Frame = +2
Query: 89 IKMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMI 268
+ + +L D +VR + VF + KI+S+ F + L++ SEDD + ++D Q+
Sbjct: 1 MSLTELDDGLVRRMAMGAVFSDFGGKIHSVGFHRTDDLLVTSSEDDSLRLFDIANAKQLK 60
Query: 269 TVNSKKYGVDLIHFTHAKNTAIHSST----KVDDTIRYLSLHDNKYIRYFPGHTKKVVTM 436
KK+G D + FTH ++ I SS +++RYLS++DN+ +RYF GH +VV++
Sbjct: 61 ITYHKKHGTDRVCFTHHPSSLICSSRYNLESTGESLRYLSMYDNRILRYFKGHKDRVVSL 120
Query: 437 CLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKL 616
C+SP+ D+F+SGSLD+++RLWDLR CQG++HL GRP AYD +GL+FA + ++KL
Sbjct: 121 CMSPINDSFMSGSLDRSVRLWDLRVNACQGILHLRGRPAVAYDQQGLVFAIAMEGGAVKL 180
Query: 617 YDLRSFDKGPFVTF 658
+D R +DKGPF TF
Sbjct: 181 FDSRCYDKGPFDTF 194
>At5g08390.1 68418.m00988 transducin family protein / WD-40 repeat
family protein similar to katanin p80 subunit
[Strongylocentrotus purpuratus] GI:3005601; contains
Pfam profile PF00400: WD domain, G-beta repeat
Length = 871
Score = 65.7 bits (153), Expect = 3e-11
Identities = 41/172 (23%), Positives = 78/172 (45%), Gaps = 6/172 (3%)
Frame = +2
Query: 128 FKVAKVFRE---NTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGV 295
F + FRE ++ +N + + L++ ED ++ ++ K ++++ G+
Sbjct: 96 FSLISSFREFVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGI 155
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
D + F ++ ++ TI+ L + K +R GH V++ P + F SGS
Sbjct: 156 DSVTFDASEGLV--AAGAASGTIKLWDLEEAKVVRTLTGHRSNCVSVNFHPFGEFFASGS 213
Query: 476 LDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
LD L++WD+R C H G V + P+G +G +K++DL
Sbjct: 214 LDTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWIVSGGEDNVVKVWDL 265
Score = 61.3 bits (142), Expect = 7e-10
Identities = 42/165 (25%), Positives = 72/165 (43%), Gaps = 2/165 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF 310
KV + + S++F P GE S S D + I+D K + T GV+++ F
Sbjct: 185 KVVRTLTGHRSNCVSVNFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 244
Query: 311 THAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
T + D+ ++ L K + F H K+ ++ P E +GS DKT+
Sbjct: 245 TPDGRWIVSGGE--DNVVKVWDLTAGKLLHEFKSHEGKIQSLDFHPHEFLLATGSADKTV 302
Query: 491 RLWDLRSPNC--QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLY 619
+ WDL + G +G ++P+G G+ ES+K++
Sbjct: 303 KFWDLETFELIGSGGTETTGVRCLTFNPDGKSVLCGL-QESLKIF 346
>At5g23430.2 68418.m02749 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 836
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD 298
R++K+ + F ++ +N + + L++ ED ++ ++ K ++++ G+D
Sbjct: 5 RAYKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSL 478
+ F ++ + ++ TI+ L + K +R GH +++ P + F SGSL
Sbjct: 64 SVTFDASE--VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 479 DKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
D L++WD+R C H G V + P+G +G +K++DL
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF 310
K+ + + S+DF P GE S S D + I+D K + T GV+++ F
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 311 THAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
T + D+ ++ L K + F H ++ ++ P E +GS D+T+
Sbjct: 152 TPDGRWVVSGGE--DNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 491 RLWDLRSPNC--QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLY 619
+ WDL + G +G +++P+G G+ ES+K++
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGL-QESLKIF 253
>At5g23430.1 68418.m02748 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
katanin p80 subunit (GI:3005601) [Strongylocentrotus
purpuratus]
Length = 837
Score = 65.3 bits (152), Expect = 4e-11
Identities = 39/171 (22%), Positives = 81/171 (47%), Gaps = 3/171 (1%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD 298
R++K+ + F ++ +N + + L++ ED ++ ++ K ++++ G+D
Sbjct: 5 RAYKLQE-FVAHSAAVNCLKIGRKSSRVLVTGGEDHKVNLWAIGKPNAILSLYGHSSGID 63
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSL 478
+ F ++ + ++ TI+ L + K +R GH +++ P + F SGSL
Sbjct: 64 SVTFDASE--VLVAAGAASGTIKLWDLEEAKIVRTLTGHRSNCISVDFHPFGEFFASGSL 121
Query: 479 DKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
D L++WD+R C H G V + P+G +G +K++DL
Sbjct: 122 DTNLKIWDIRKKGCIHTYKGHTRGVNVLRFTPDGRWVVSGGEDNIVKVWDL 172
Score = 60.1 bits (139), Expect = 2e-09
Identities = 40/165 (24%), Positives = 73/165 (44%), Gaps = 2/165 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF 310
K+ + + S+DF P GE S S D + I+D K + T GV+++ F
Sbjct: 92 KIVRTLTGHRSNCISVDFHPFGEFFASGSLDTNLKIWDIRKKGCIHTYKGHTRGVNVLRF 151
Query: 311 THAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
T + D+ ++ L K + F H ++ ++ P E +GS D+T+
Sbjct: 152 TPDGRWVVSGGE--DNIVKVWDLTAGKLLTEFKSHEGQIQSLDFHPHEFLLATGSADRTV 209
Query: 491 RLWDLRSPNC--QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLY 619
+ WDL + G +G +++P+G G+ ES+K++
Sbjct: 210 KFWDLETFELIGSGGPETAGVRCLSFNPDGKTVLCGL-QESLKIF 253
>At1g61210.1 68414.m06897 WD-40 repeat family protein / katanin p80
subunit, putative contains 5 WD-40 repeats (PF00400);
similar to katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 1180
Score = 63.7 bits (148), Expect = 1e-10
Identities = 45/177 (25%), Positives = 81/177 (45%), Gaps = 2/177 (1%)
Frame = +2
Query: 95 MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV 274
++KL D V K+ + F + ++++F P GE L S S D + I+D K + T
Sbjct: 81 VIKLWD--VEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSSDANLKIWDIRKKGCIQTY 138
Query: 275 NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE 454
G+ I FT + S +D+ ++ L K + F H + ++ P+E
Sbjct: 139 KGHSRGISTIRFTPDGRWVV--SGGLDNVVKVWDLTAGKLLHEFKFHEGPIRSLDFHPLE 196
Query: 455 DTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAA--YDPEGLIFAAGVNSESIKLY 619
+GS D+T++ WDL + G V + + P+G G++ +S+K+Y
Sbjct: 197 FLLATGSADRTVKFWDLETFELIGSTRPEATGVRSIKFHPDGRTLFCGLD-DSLKVY 252
Score = 52.8 bits (121), Expect = 2e-07
Identities = 37/171 (21%), Positives = 72/171 (42%), Gaps = 3/171 (1%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFSPNGETLISCSEDD-QIVIYDCEKGTQMITVNSKKYGVD 298
R +K+ + F ++ +N + L DD ++ ++ K T ++++ VD
Sbjct: 4 RGYKLQE-FLAHSANVNCLSIGKKTSRLFITGGDDYKVNLWAIGKPTSLMSLCGHTSAVD 62
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSL 478
+ F A+ + ++ I+ + + K +R F GH + P + SGS
Sbjct: 63 SVAFDSAEVLVLAGASS--GVIKLWDVEEAKMVRAFTGHRSNCSAVEFHPFGEFLASGSS 120
Query: 479 DKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
D L++WD+R C H G + P+G +G +K++DL
Sbjct: 121 DANLKIWDIRKKGCIQTYKGHSRGISTIRFTPDGRWVVSGGLDNVVKVWDL 171
>At4g02730.1 68417.m00372 transducin family protein / WD-40 repeat
family protein similar to C. elegans putative WD-repeat
protein C14B1.4 (SP:Q17963)
Length = 333
Score = 61.7 bits (143), Expect = 5e-10
Identities = 37/137 (27%), Positives = 71/137 (51%), Gaps = 4/137 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT-VNSKKYGV 295
V++ K ++ + ++ I+S+ F+ +G ++S S D I+D ++GT + T ++ K V
Sbjct: 157 VKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAKEGTCLKTLIDDKSPAV 216
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKV--VTMCLSPVEDTFL- 466
F + N +D T++ + K+++ + GHT KV +T S ++
Sbjct: 217 SFAKF--SPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNGKYIV 274
Query: 467 SGSLDKTLRLWDLRSPN 517
SGS D + LWDL++ N
Sbjct: 275 SGSEDNCVYLWDLQARN 291
Score = 57.2 bits (132), Expect = 1e-08
Identities = 33/174 (18%), Positives = 82/174 (47%), Gaps = 3/174 (1%)
Frame = +2
Query: 116 VVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGV 295
+ + ++ K +T I+ + FS +G L S S D ++++ + + G+
Sbjct: 29 IYKPYRHLKTLEGHTAAISCVKFSNDGNLLASASVDKTMILWSATNYSLIHRYEGHSSGI 88
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDN-KYIRYFPGHTKKVVTMCLSPVEDTFLSG 472
+ ++ + +S D T+R + ++ GHT V + +P + +SG
Sbjct: 89 SDLAWSSDSHYTCSASD--DCTLRIWDARSPYECLKVLRGHTNFVFCVNFNPPSNLIVSG 146
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPVAA--YDPEGLIFAAGVNSESIKLYDLR 628
S D+T+R+W++++ C ++ P+++ ++ +G + + + S K++D +
Sbjct: 147 SFDETIRIWEVKTGKCVRMIKAHSMPISSVHFNRDGSLIVSASHDGSCKIWDAK 200
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/120 (23%), Positives = 56/120 (46%), Gaps = 4/120 (3%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVI--YDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
+ + ++ FSPNG+ ++ + D + + Y K ++ T ++ K F+
Sbjct: 211 DKSPAVSFAKFSPNGKFILVATLDSTLKLSNYATGKFLKVYTGHTNKVFCITSAFSVTNG 270
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS--LDKTLRLW 499
I S ++ D+ + L ++ GHT V+++ PV++ S LDKT+R+W
Sbjct: 271 KYIVSGSE-DNCVYLWDLQARNILQRLEGHTDAVISVSCHPVQNEISSSGNHLDKTIRIW 329
>At5g25150.1 68418.m02981 transducin family protein / WD-40 repeat
family protein similar to TBP-associated factor
(GI:1732075) [Homo sapiens] and to 100 kDa subunit of
Pol II transcription factor (GI:1491718) {Homo sapiens];
contains Pfam PF00400: WD domain, G-beta repeat (6
copies)|8689032|gb|AV528749.1|AV528749
Length = 666
Score = 58.4 bits (135), Expect = 5e-09
Identities = 45/155 (29%), Positives = 70/155 (45%), Gaps = 2/155 (1%)
Frame = +2
Query: 182 FSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDT 361
FSP G SCS D I+ ++ + + VD H I + + D T
Sbjct: 468 FSPFGHYFASCSHDRTARIWSMDRIQPLRIMAGHLSDVDW----HPNCNYIATGSS-DKT 522
Query: 362 IRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC-QGLM-H 535
+R + + +R F GH V+++ +SP SG D T+ +WDL + C LM H
Sbjct: 523 VRLWDVQTGECVRIFIGHRSMVLSLAMSPDGRYMASGDEDGTIMMWDLSTARCITPLMGH 582
Query: 536 LSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
S +Y EG + A+G ++KL+D+ S K
Sbjct: 583 NSCVWSLSYSGEGSLLASGSADCTVKLWDVTSSTK 617
Score = 37.9 bits (84), Expect = 0.007
Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 1/98 (1%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
S+ D TIR S N + + GH V SP F S S D+T R+W +
Sbjct: 435 SSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYFASCSHDRTARIWSM--DRI 492
Query: 521 QGLMHLSGR-PVAAYDPEGLIFAAGVNSESIKLYDLRS 631
Q L ++G + P A G + ++++L+D+++
Sbjct: 493 QPLRIMAGHLSDVDWHPNCNYIATGSSDKTVRLWDVQT 530
Score = 31.9 bits (69), Expect = 0.47
Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 2/74 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV--AAYDPEGLIF 583
GH+ V + SP D LS S D T+RLW + PV A + P G F
Sbjct: 416 GHSGPVYSATFSPPGDFVLSSSADTTIRLWSTKLNANLVCYKGHNYPVWDAQFSPFGHYF 475
Query: 584 AAGVNSESIKLYDL 625
A+ + + +++ +
Sbjct: 476 ASCSHDRTARIWSM 489
>At4g15900.1 68417.m02416 PP1/PP2A phosphatases pleiotropic
regulator 1 (PRL1) identical to PP1/PP2A phosphatases
pleiotropic regulator PRL1 (SP:Q42384) [Arabidopsis
thaliana], PRL1 [Arabidopsis thaliana] GI:577733;
contains Pfam PF00400: WD domain, G-beta repeat (7
copies)
Length = 486
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/172 (25%), Positives = 72/172 (41%), Gaps = 5/172 (2%)
Frame = +2
Query: 128 FKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIH 307
+K +V + + + S+ F P+ E + S D I I+D G +T+ ++ +
Sbjct: 166 WKNYRVIQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGH---IEQVR 222
Query: 308 FTHAKNTAIHSSTKVDDT-IRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
N + + DD ++ L NK IR + GH V + L P D L+G D
Sbjct: 223 GLAVSNRHTYMFSAGDDKQVKCWDLEQNKVIRSYHGHLSGVYCLALHPTLDVLLTGGRDS 282
Query: 485 TLRLWDLRSPNCQGLMHLSGRPVAAYD----PEGLIFAAGVNSESIKLYDLR 628
R+WD+R+ + LSG P G + +IK +DLR
Sbjct: 283 VCRVWDIRTK--MQIFALSGHDNTVCSVFTRPTDPQVVTGSHDTTIKFWDLR 332
>At3g16650.1 68416.m02128 PP1/PP2A phosphatases pleiotropic
regulator 2 (PRL2) identical to SP|Q39190 PP1/PP2A
phosphatases pleiotropic regulator PRL2 {Arabidopsis
thaliana}, GB:Q39190 from [Arabidopsis thaliana];
contains Pfam PF00400: WD domain, G-beta repeat (7
copies, 1 weak)
Length = 479
Score = 58.0 bits (134), Expect = 6e-09
Identities = 46/174 (26%), Positives = 80/174 (45%), Gaps = 7/174 (4%)
Frame = +2
Query: 128 FKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIH 307
+K +V + + + S+ F P+ E + S D I I+D G +T+ V +
Sbjct: 160 WKNYRVLQGHLGWVRSVAFDPSNEWFCTGSADRTIKIWDVATGVLKLTLTGHIGQVRGLA 219
Query: 308 FTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKT 487
++ ++T + S+ D ++ L NK IR + GH V + L P D L+G D
Sbjct: 220 VSN-RHTYMFSAGD-DKQVKCWDLEQNKVIRSYHGHLHGVYCLALHPTLDVVLTGGRDSV 277
Query: 488 LRLWDLRS-------PNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLR 628
R+WD+R+ P+ + + RP DP+ + G + +IK +DLR
Sbjct: 278 CRVWDIRTKMQIFVLPHDSDVFSVLARPT---DPQVI---TGSHDSTIKFWDLR 325
>At5g67320.1 68418.m08490 WD-40 repeat family protein strong
similarity to unknown protein (ref|NP_005638.1)
Length = 613
Score = 57.6 bits (133), Expect = 8e-09
Identities = 42/167 (25%), Positives = 73/167 (43%), Gaps = 7/167 (4%)
Frame = +2
Query: 137 AKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF-- 310
AK F + ++N + + P G L SCS+D I++ ++ T + + + I +
Sbjct: 441 AKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIKQSTFVHDLREHTKEIYTIRWSP 500
Query: 311 ----THAKNTAIH-SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
T+ N + +S D T++ K + F GH + V ++ SP + SGS
Sbjct: 501 TGPGTNNPNKQLTLASASFDSTVKLWDAELGKMLCSFNGHREPVYSLAFSPNGEYIASGS 560
Query: 476 LDKTLRLWDLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKL 616
LDK++ +W ++ G+ V Y G IF N E K+
Sbjct: 561 LDKSIHIWSIK----------EGKIVKTYTGNGGIFEVCWNKEGNKI 597
Score = 33.9 bits (74), Expect = 0.12
Identities = 15/40 (37%), Positives = 19/40 (47%)
Frame = +2
Query: 386 NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
N +R GHT +V SP SGS D T R+W +
Sbjct: 255 NSDVRILEGHTSEVCACAWSPSASLLASGSGDATARIWSI 294
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/116 (22%), Positives = 51/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYD--CEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
I S+ ++ G+ L++ S D V++D E+ Q +S G L +N +
Sbjct: 368 IFSLKWNKKGDYLLTGSVDRTAVVWDVKAEEWKQQFEFHS---GPTLD--VDWRNNVSFA 422
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR 508
++ D I + + + + F GH +V + P S S D T ++W+++
Sbjct: 423 TSSTDSMIYLCKIGETRPAKTFTGHQGEVNCVKWDPTGSLLASCSDDSTAKIWNIK 478
>At3g49660.1 68416.m05427 transducin family protein / WD-40 repeat
family protein beta-transducin, Schizosaccharomyces
pombe, EMBL:CAA17803
Length = 317
Score = 57.6 bits (133), Expect = 8e-09
Identities = 36/165 (21%), Positives = 75/165 (45%), Gaps = 3/165 (1%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F + + I+ + FS + ++S S+D + ++D E G+ + T+ ++F N
Sbjct: 67 FTGHENGISDVAFSSDARFIVSASDDKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSN 126
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
+ S D+T+R + K ++ P H+ V + + +S S D R+WD
Sbjct: 127 MIVSGS--FDETVRIWDVTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDS 184
Query: 506 RSPNC-QGLMHLSGRPVA--AYDPEGLIFAAGVNSESIKLYDLRS 631
+ +C + L+ PV+ + P G G +++L+++ S
Sbjct: 185 GTGHCVKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISS 229
Score = 53.6 bits (123), Expect = 1e-07
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 5/138 (3%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKY-----GVDLIHFTHAKNTA 331
++S+ FS +G L S S D I Y I +++ G+ + F+
Sbjct: 27 VSSVKFSSDGRLLASASADKTIRTYTINTINDPIAEPVQEFTGHENGISDVAFSSDARFI 86
Query: 332 IHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
+ +S D T++ + I+ GHT + +P + +SGS D+T+R+WD+ +
Sbjct: 87 VSASD--DKTLKLWDVETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTT 144
Query: 512 PNCQGLMHLSGRPVAAYD 565
C ++ PV A D
Sbjct: 145 GKCLKVLPAHSDPVTAVD 162
Score = 51.2 bits (117), Expect = 7e-07
Identities = 31/126 (24%), Positives = 60/126 (47%), Gaps = 4/126 (3%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT----VNSKKYGVDL 301
V + + ++ + FSPNG+ ++ + D+ + +++ + T VN++
Sbjct: 190 VKTLIDDENPPVSFVRFSPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSA 249
Query: 302 IHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLD 481
T+ K S D+ + L+ K ++ GHT+ V+ + P E+ SGSLD
Sbjct: 250 FSVTNGKRIVSGSE---DNCVHMWELNSKKLLQKLEGHTETVMNVACHPTENLIASGSLD 306
Query: 482 KTLRLW 499
KT+R+W
Sbjct: 307 KTVRIW 312
Score = 48.4 bits (110), Expect = 5e-06
Identities = 42/176 (23%), Positives = 83/176 (47%), Gaps = 9/176 (5%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT-VNSKKYGV 295
V + K KV ++D + ++DF+ +G ++S S D I+D G + T ++ + V
Sbjct: 142 VTTGKCLKVLPAHSDPVTAVDFNRDGSLIVSSSYDGLCRIWDSGTGHCVKTLIDDENPPV 201
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGH--TKKVVTMCLSPVE-DTFL 466
+ F + N +D+T+R ++ K+++ + GH + ++ S +
Sbjct: 202 SFVRF--SPNGKFILVGTLDNTLRLWNISSAKFLKTYTGHVNAQYCISSAFSVTNGKRIV 259
Query: 467 SGSLDKTLRLWDLRSPNCQGLMHLSGRP-----VAAYDPEGLIFAAGVNSESIKLY 619
SGS D + +W+L S L L G VA + E LI A+G ++++++
Sbjct: 260 SGSEDNCVHMWELNSKKL--LQKLEGHTETVMNVACHPTENLI-ASGSLDKTVRIW 312
Score = 37.9 bits (84), Expect = 0.007
Identities = 34/141 (24%), Positives = 59/141 (41%), Gaps = 1/141 (0%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT 271
K +KL D V + + K +T+ ++F+P ++S S D+ + I+D G +
Sbjct: 93 KTLKLWD--VETGSLIKTLIGHTNYAFCVNFNPQSNMIVSGSFDETVRIWDVTTGKCLKV 150
Query: 272 VNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIR-YFPGHTKKVVTMCLSP 448
+ + V + F + + SS D R ++ V + SP
Sbjct: 151 LPAHSDPVTAVDFNRDGSLIVSSS--YDGLCRIWDSGTGHCVKTLIDDENPPVSFVRFSP 208
Query: 449 VEDTFLSGSLDKTLRLWDLRS 511
L G+LD TLRLW++ S
Sbjct: 209 NGKFILVGTLDNTLRLWNISS 229
>At1g73720.1 68414.m08536 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Will die slowly protein
(SP:Q9V3J8)[Drosophila melanogaster]
Length = 511
Score = 57.6 bits (133), Expect = 8e-09
Identities = 35/131 (26%), Positives = 62/131 (47%)
Frame = +2
Query: 128 FKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIH 307
++ + F + D + IDFS + E L S S+D +I I+ G + ++ GV +
Sbjct: 253 YQADESFMMHDDPVLCIDFSRDSEMLASGSQDGKIKIWRIRTGVCIRRFDAHSQGVTSLS 312
Query: 308 FTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKT 487
F+ + + ST D T R L K ++ F GHT V + ++ S D T
Sbjct: 313 FSRDGSQLL--STSFDQTARIHGLKSGKLLKEFRGHTSYVNHAIFTSDGSRIITASSDCT 370
Query: 488 LRLWDLRSPNC 520
+++WD ++ +C
Sbjct: 371 VKVWDSKTTDC 381
>At5g56130.1 68418.m07002 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to beta transducin-like protein HET-E2C*4
(GI:17225206) [Podospora anserina]
Length = 315
Score = 54.8 bits (126), Expect = 6e-08
Identities = 37/118 (31%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRY----FPGHTKKVVTMCLSPVE-DTFLSGSLDKTLRLWD 502
+S VD T R ++ + + + GHT V +C P D + S DK++RLWD
Sbjct: 36 ASGSVDQTARIWNIEPHGHSKAKDLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWD 95
Query: 503 LRSPNCQGLMHLSGRPV-AAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQE 673
RS C + LSG + Y P+G A G + + + D+R F P K N E
Sbjct: 96 ARSGKCTQQVELSGENINITYKPDGTHVAVGNRDDELTILDVRKFK--PLHRRKFNYE 151
Score = 38.7 bits (86), Expect = 0.004
Identities = 27/100 (27%), Positives = 49/100 (49%), Gaps = 7/100 (7%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL------RSP 514
+ TI + SLH +Y GH KKV ++ + SGS+D+T R+W++ ++
Sbjct: 3 ETTIPFKSLHSREY----QGHKKKVHSVAWNSNGTKLASGSVDQTARIWNIEPHGHSKAK 58
Query: 515 NCQGLMHLSGRPVAAYDPE-GLIFAAGVNSESIKLYDLRS 631
+ + H +DP+ + A +S++L+D RS
Sbjct: 59 DLELKGHTDSVDQLCWDPKHSDLVATASGDKSVRLWDARS 98
Score = 35.9 bits (79), Expect = 0.029
Identities = 33/143 (23%), Positives = 56/143 (39%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT 271
K ++L D RS K + + + IN I + P+G + + DD++ I D K +
Sbjct: 89 KSVRLWD--ARSGKCTQQVELSGENIN-ITYKPDGTHVAVGNRDDELTILDVRKFKPL-- 143
Query: 272 VNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV 451
+ +K+ ++ T T+ LS K + HT + + P
Sbjct: 144 -HRRKFNYEVNEIAWNMPGDFFFLTTGLGTVEVLSYPSLKPLDTLTAHTAGCYCIAIDPK 202
Query: 452 EDTFLSGSLDKTLRLWDLRSPNC 520
F GS D + LWD+ C
Sbjct: 203 GRYFAVGSADSLVSLWDISDMLC 225
>At2g41500.1 68415.m05127 WD-40 repeat family protein / small
nuclear ribonucleoprotein Prp4p-related similar to U4/U6
small nuclear ribonucleoprotein hPrp4 (GP:2708305) {Homo
sapiens}; contains Pfam PF00400: WD domain, G-beta
repeat (7 copies)|19877698|gb|AU238529.1|AU238529
Length = 554
Score = 54.8 bits (126), Expect = 6e-08
Identities = 42/168 (25%), Positives = 71/168 (42%), Gaps = 3/168 (1%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHA 319
+ F + D++ + F P+G+ L + S D ++D G +++ V I F
Sbjct: 333 QTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAELLLQEGHSRSVYGIAFQ-- 390
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
++ A+ +S +D R L + I F GH K V ++ SP SG D R+W
Sbjct: 391 QDGALAASCGLDSLARVWDLRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIW 450
Query: 500 DLRSPNCQGLM--HLSGRPVAAYDP-EGLIFAAGVNSESIKLYDLRSF 634
DLR ++ H + Y+P EG A + ++ R F
Sbjct: 451 DLRMRKSLYIIPAHANLVSQVKYEPQEGYFLATASYDMKVNIWSGRDF 498
Score = 47.2 bits (107), Expect = 1e-05
Identities = 29/127 (22%), Positives = 59/127 (46%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD 298
+R+ + VF+ + + S++FSPNG L S ED+Q I+D + + + V
Sbjct: 410 LRTGRSILVFQGHIKPVFSVNFSPNGYHLASGGEDNQCRIWDLRMRKSLYIIPAHANLVS 469
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSL 478
+ + + + ++ D + S D ++ GH KV ++ ++ + S
Sbjct: 470 QVKYEPQEGYFL-ATASYDMKVNIWSGRDFSLVKSLAGHESKVASLDITADSSCIATVSH 528
Query: 479 DKTLRLW 499
D+T++LW
Sbjct: 529 DRTIKLW 535
Score = 39.1 bits (87), Expect = 0.003
Identities = 37/159 (23%), Positives = 68/159 (42%), Gaps = 4/159 (2%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV--NSKKYGVDLIHFTHAKNTAIHS 340
+ FS +G+ L +CS +++ + T I V + K+ D++ F+ + +
Sbjct: 258 LTGCSFSRDGKILATCSLSGVTKLWEMPQVTNTIAVLKDHKERATDVV-FSPVDDCLATA 316
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
S D L D ++ F GH ++ + P + S DKT RLWD+ +
Sbjct: 317 SA---DRTAKLWKTDGTLLQTFEGHLDRLARVAFHPSGKYLGTTSYDKTWRLWDINTGAE 373
Query: 521 QGLMHLSGRPV--AAYDPEGLIFAAGVNSESIKLYDLRS 631
L R V A+ +G + A+ +++DLR+
Sbjct: 374 LLLQEGHSRSVYGIAFQQDGALAASCGLDSLARVWDLRT 412
>At2g33340.2 68415.m04087 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 537
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNT 328
+ N I S+D + + + + D V++D G + T+ V + F +
Sbjct: 219 KTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDL 278
Query: 329 AIHSSTKVDDTIR-YLSLHDNKYIRYFP--GHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ +S D T+R + + D Y + H+ +V + + P F+S SLD T +
Sbjct: 279 VLTASA--DKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 500 DLRSPNCQGLMHLSGRPV----AAYDPEGLIFAAGVNSESIKLYDLRS 631
DL S +C + + V AA+ P+GLI G + +K++D++S
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 1/161 (0%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTA 331
+++ ++ ++ P + +S S D YD G+ + V+ VD +
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGL 366
Query: 332 IHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
I + ++ + + F GHT +V + S FL+ + + +RLWDLR
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE-NGYFLATAAEDGVRLWDLRK 425
Query: 512 -PNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
N + + V +DP G G+ + IK+Y S
Sbjct: 426 LRNFKSFLSADANSV-EFDPSGSYL--GIAASDIKVYQTAS 463
>At2g33340.1 68415.m04086 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 565
Score = 52.8 bits (121), Expect = 2e-07
Identities = 41/168 (24%), Positives = 76/168 (45%), Gaps = 7/168 (4%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNT 328
+ N I S+D + + + + D V++D G + T+ V + F +
Sbjct: 219 KTNKPGICSMDILHSKDVIATGGVDATAVLFDRPSGQILSTLTGHSKKVTSVKFVGDSDL 278
Query: 329 AIHSSTKVDDTIR-YLSLHDNKYIRYFP--GHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ +S D T+R + + D Y + H+ +V + + P F+S SLD T +
Sbjct: 279 VLTASA--DKTVRIWRNPGDGNYACGYTLNDHSAEVRAVTVHPTNKYFVSASLDGTWCFY 336
Query: 500 DLRSPNCQGLMHLSGRPV----AAYDPEGLIFAAGVNSESIKLYDLRS 631
DL S +C + + V AA+ P+GLI G + +K++D++S
Sbjct: 337 DLSSGSCLAQVSDDSKNVDYTAAAFHPDGLILGTGTSQSVVKIWDVKS 384
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/161 (21%), Positives = 65/161 (40%), Gaps = 1/161 (0%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTA 331
+++ ++ ++ P + +S S D YD G+ + V+ VD +
Sbjct: 307 DHSAEVRAVTVHPTNKYFVSASLDGTWCFYDLSSGSCLAQVSDDSKNVDYTAAAFHPDGL 366
Query: 332 IHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
I + ++ + + F GHT +V + S FL+ + + +RLWDLR
Sbjct: 367 ILGTGTSQSVVKIWDVKSQANVAKFDGHTGEVTAISFSE-NGYFLATAAEDGVRLWDLRK 425
Query: 512 -PNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
N + + V +DP G G+ + IK+Y S
Sbjct: 426 LRNFKSFLSADANSV-EFDPSGSYL--GIAASDIKVYQTAS 463
>At3g21540.1 68416.m02717 transducin family protein / WD-40 repeat
family protein contains Pfam profile: PF00400 WD domain,
G-beta repeat (10 copies); similar to WD-repeat protein
3 (SP:Q9UNX4) [Homo sapiens]
Length = 955
Score = 52.4 bits (120), Expect = 3e-07
Identities = 37/140 (26%), Positives = 63/140 (45%), Gaps = 2/140 (1%)
Frame = +2
Query: 221 DDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIR 400
D I I+D EKGT + NS K V + + + + S +K +D I + + ++ R
Sbjct: 85 DGSIRIWDTEKGTCEVNFNSHKGAVTALRYNKV-GSMLASGSKDNDIILWDVVGESGLFR 143
Query: 401 YFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEG 574
GH +V + +S S DK LR+WDL + +C ++ H S DPE
Sbjct: 144 -LRGHRDQVTDLVFLDGGKKLVSSSKDKFLRVWDLETQHCMQIVSGHHSEVWSVDTDPEE 202
Query: 575 LIFAAGVNSESIKLYDLRSF 634
G + ++ Y ++ +
Sbjct: 203 RYVVTGSADQELRFYAVKEY 222
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/109 (22%), Positives = 54/109 (49%)
Frame = +2
Query: 176 IDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVD 355
ID S +GE +++ S+D + I+ + G ++ + +G ++ +NT S D
Sbjct: 588 IDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFA--HGDSVMGVKFVRNTHYLFSIGKD 645
Query: 356 DTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
++Y +++ GH ++ + +S D ++GS D+++R WD
Sbjct: 646 RLVKYWDADKFEHLLTLEGHHAEIWCLAISNRGDFLVTGSHDRSMRRWD 694
Score = 39.5 bits (88), Expect = 0.002
Identities = 35/162 (21%), Positives = 75/162 (46%), Gaps = 9/162 (5%)
Frame = +2
Query: 95 MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE------KG 256
+++++D + + KV +V + + I SI PN ++ S D ++ ++ + K
Sbjct: 468 VLEIID-IGSATKVEEV-KAHGGTIWSITPIPNDSGFVTVSADHEVKFWEYQVKQKSGKA 525
Query: 257 TQMITVN---SKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKV 427
T+ +TV+ S K D++ + + + +D T++ + K+ GH V
Sbjct: 526 TKKLTVSNVKSMKMNDDVLAVAISPDAKHIAVALLDSTVKVFYMDSLKFYLSLYGHKLPV 585
Query: 428 VTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV 553
+ + +S + ++GS DK L++W L +C + G V
Sbjct: 586 MCIDISSDGELIVTGSQDKNLKIWGLDFGDCHKSIFAHGDSV 627
>At1g11160.1 68414.m01278 WD-40 repeat family protein / katanin p80
subunit, putative similar to contains 6 WD-40 repeats
(PF00400); katanin p80 subunit (GI:3005601)
[Strongylocentrotus purpuratus]
Length = 974
Score = 52.0 bits (119), Expect = 4e-07
Identities = 34/163 (20%), Positives = 70/163 (42%), Gaps = 2/163 (1%)
Frame = +2
Query: 155 NTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAI 334
+T ++S+ F+ +++ + I ++D E+ + + + F H +
Sbjct: 6 HTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEF-HPFGEFL 64
Query: 335 HSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSP 514
S + D +R I+ + GHT+ + T+ SP +SG LD +++WDL +
Sbjct: 65 ASGSS-DTNLRVWDTRKKGCIQTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAG 123
Query: 515 NCQGLMHLSGRPVAAYD--PEGLIFAAGVNSESIKLYDLRSFD 637
P+ + D P + A G ++K +DL +F+
Sbjct: 124 KLLHEFKCHEGPIRSLDFHPLEFLLATGSADRTVKFWDLETFE 166
Score = 37.5 bits (83), Expect = 0.009
Identities = 23/86 (26%), Positives = 39/86 (45%), Gaps = 2/86 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIF 583
GHT V ++ + E L+G+ ++LWDL H S + P G
Sbjct: 5 GHTSPVDSVAFNSEEVLVLAGASSGVIKLWDLEESKMVRAFTGHRSNCSAVEFHPFGEFL 64
Query: 584 AAGVNSESIKLYDLRSFDKGPFVTFK 661
A+G + +++++D R KG T+K
Sbjct: 65 ASGSSDTNLRVWDTRK--KGCIQTYK 88
Score = 29.9 bits (64), Expect = 1.9
Identities = 25/128 (19%), Positives = 55/128 (42%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHA 319
+ ++ +T I++I+FSP+G ++S D+ + ++D G + + + + F H
Sbjct: 85 QTYKGHTRGISTIEFSPDGRWVVSGGLDNVVKVWDLTAGKLLHEFKCHEGPIRSLDF-HP 143
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ ++ D T+++ L + I V + P T G LD L+++
Sbjct: 144 LEFLL-ATGSADRTVKFWDLETFELIGTTRPEATGVRAIAFHPDGQTLFCG-LDDGLKVY 201
Query: 500 DLRSPNCQ 523
C+
Sbjct: 202 SWEPVICR 209
Score = 28.3 bits (60), Expect = 5.8
Identities = 13/44 (29%), Positives = 23/44 (52%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE 250
+ +F++ R + +I F P+G+TL C DD + +Y E
Sbjct: 162 LETFELIGTTRPEATGVRAIAFHPDGQTLF-CGLDDGLKVYSWE 204
>At5g16750.1 68418.m01961 transducin family protein / WD-40 repeat
family protein contains 8 WD-40 repeats (PF00400);
similar to transducin homolog sazD - Homo sapiens,
EMBL:U02609
Length = 876
Score = 50.0 bits (114), Expect = 2e-06
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 10/203 (4%)
Frame = +2
Query: 86 CIKMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQM 265
C ++ +VD S K +D + ++ SP+ + L S QI ++D E +
Sbjct: 38 CGDVINIVDSTDSSVK--STIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLET-LKC 94
Query: 266 ITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLS 445
I G + HA + ++ D + + YF GH V ++
Sbjct: 95 IRSWKGHEGPVMGMACHASGGLL-ATAGADRKVLVWDVDGGFCTHYFRGHKGVVSSILFH 153
Query: 446 PV--EDTFLSGSLDKTLRLWDLRSPN----CQGLM--HLSGRPVAAYDPEGL-IFAAGVN 598
P ++ +SGS D T+R+WDL + N C +M H S A +GL +F+AG
Sbjct: 154 PDSNKNILISGSDDATVRVWDLNAKNTEKKCLAIMEKHFSAVTSIALSEDGLTLFSAG-R 212
Query: 599 SESIKLYDLRSFD-KGPFVTFKL 664
+ + L+DL + K T+++
Sbjct: 213 DKVVNLWDLHDYSCKATVATYEV 235
Score = 46.8 bits (106), Expect = 2e-05
Identities = 29/132 (21%), Positives = 56/132 (42%)
Frame = +2
Query: 125 SFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLI 304
+ K V + INS+ + N + + SED I+ ++T+ K + +
Sbjct: 488 NLKTRSVVAAHDKDINSVAVARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSV 547
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
F+ + +S D T++ ++ D ++ F GHT V+ F+S D
Sbjct: 548 EFSTVDQCVMTASG--DKTVKIWAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADG 605
Query: 485 TLRLWDLRSPNC 520
L+LW++ + C
Sbjct: 606 LLKLWNVNTSEC 617
Score = 36.7 bits (81), Expect = 0.016
Identities = 23/107 (21%), Positives = 51/107 (47%), Gaps = 2/107 (1%)
Frame = +2
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
A+N ++ + D T L D ++ GH +++ ++ S V+ ++ S DKT+++
Sbjct: 508 ARNDSLVCTGSEDRTASIWRLPDLVHVVTLKGHKRRIFSVEFSTVDQCVMTASGDKTVKI 567
Query: 497 WDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
W + +C H S A++ +G F + +KL+++ +
Sbjct: 568 WAISDGSCLKTFEGHTSSVLRASFITDGTQFVSCGADGLLKLWNVNT 614
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/78 (28%), Positives = 41/78 (52%), Gaps = 6/78 (7%)
Frame = +2
Query: 410 GHTKKVVTM--CLSPVEDTFL-SGSLDKTLRLWDLRSPNCQGL--MHLSGRPVAAYDPEG 574
GH + V+++ C+S + + +GS DKT+RLW+ S +C G+ H A+ +
Sbjct: 399 GHKEVVLSLDTCVSSSGNVLIVTGSKDKTVRLWNATSKSCIGVGTGHNGDILAVAFAKKS 458
Query: 575 L-IFAAGVNSESIKLYDL 625
F +G ++K++ L
Sbjct: 459 FSFFVSGSGDRTLKVWSL 476
Score = 30.7 bits (66), Expect = 1.1
Identities = 26/112 (23%), Positives = 44/112 (39%), Gaps = 3/112 (2%)
Frame = +2
Query: 356 DTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMH 535
D I + D+ G + + + LSP + S + +R+WDL + C
Sbjct: 40 DVINIVDSTDSSVKSTIEGESDTLTALALSPDDKLLFSAGHSRQIRVWDLETLKCIRSWK 99
Query: 536 LSGRPV---AAYDPEGLIFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKGM 682
PV A + GL+ AG + + ++D+ G F T KG+
Sbjct: 100 GHEGPVMGMACHASGGLLATAGAD-RKVLVWDV----DGGFCTHYFRGHKGV 146
>At5g64730.1 68418.m08140 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to Will die slowly protein (SP:Q9V3J8) [Fruit
fly] {Drosophila m.]
Length = 299
Score = 49.2 bits (112), Expect = 3e-06
Identities = 31/127 (24%), Positives = 58/127 (45%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF 310
K A + + + + + F+ +G ++C +D I +++ +G + T S V +H
Sbjct: 9 KEAHILKGHEGAVLAARFNGDGNYALTCGKDRTIRLWNPHRGILIKTYKSHGREVRDVHV 68
Query: 311 THAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
T + A S D + Y + + IR F GH +V + + +S D++L
Sbjct: 69 T--SDNAKFCSCGGDRQVYYWDVSTGRVIRKFRGHDGEVNAVKFNDSSSVVVSAGFDRSL 126
Query: 491 RLWDLRS 511
R+WD RS
Sbjct: 127 RVWDCRS 133
>At4g29830.1 68417.m04246 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400); G
protein beta subunit-like protein, Schistosoma mansoni,
gb:U30261
Length = 321
Score = 49.2 bits (112), Expect = 3e-06
Identities = 32/115 (27%), Positives = 58/115 (50%), Gaps = 3/115 (2%)
Frame = +2
Query: 173 SIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKV 352
S+ +SPNG+ L S D I ++D ++ + + V + F+ + S +
Sbjct: 163 SVAWSPNGKRLACGSMDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVDPRVLFSGS-- 220
Query: 353 DDTIRYLSLHDNK---YIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR 508
DD ++++HD + + GHT V+++ SP +GS D+T+RLWDL+
Sbjct: 221 DDG--HVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDLK 273
Score = 41.1 bits (92), Expect = 8e-04
Identities = 33/121 (27%), Positives = 54/121 (44%), Gaps = 3/121 (2%)
Frame = +2
Query: 275 NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE 454
+SKK+ + + + K A S +D TI + +K + GH V ++ SPV+
Sbjct: 156 SSKKFVLSVAWSPNGKRLACGS---MDGTICVFDVDRSKLLHQLEGHNMPVRSLVFSPVD 212
Query: 455 DTFL-SGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
L SGS D + + D G M H S P+G A G + +++L+DL
Sbjct: 213 PRVLFSGSDDGHVNMHDAEGKTLLGSMSGHTSWVLSVDASPDGGAIATGSSDRTVRLWDL 272
Query: 626 R 628
+
Sbjct: 273 K 273
Score = 36.3 bits (80), Expect = 0.022
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 3/98 (3%)
Frame = +2
Query: 350 VDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGL 529
+D+T++ + +R GH+ V + P S S+D +R++D+ + +
Sbjct: 38 LDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDVDTNATIAV 97
Query: 530 MHLSGRPV--AAYDPEGLIFA-AGVNSESIKLYDLRSF 634
+ V ++P+G I A AG +S S+KL+D S+
Sbjct: 98 LEAPPSEVWGMQFEPKGTILAVAGGSSASVKLWDTASW 135
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +2
Query: 464 LSGSLDKTLRLW--DLRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
L+GSLD+T++LW D H G A P G+I A+ ++++D+
Sbjct: 34 LTGSLDETVKLWRPDELDLVRTNTGHSLGVAALAAHPSGIIAASSSIDSFVRVFDV 89
>At2g21390.1 68415.m02546 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1218
Score = 48.8 bits (111), Expect = 4e-06
Identities = 29/120 (24%), Positives = 53/120 (44%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F E+ + + F + +S +D +I +++ + + T+ + + F H
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENP 106
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
+ +S D TIR + I GH V+ P ED +S SLD+T+R+WD+
Sbjct: 107 WIVSASD--DQTIRIWNWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/168 (18%), Positives = 78/168 (46%), Gaps = 3/168 (1%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F ++++ + F P +++ I ++D GT + + + V +HF +++
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP 64
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
+ D I+ + ++ + GH + T+ +S S D+T+R+W+
Sbjct: 65 LFVSGGD--DYKIKVWNYKTHRCLFTLLGHLDYIRTVQFHHENPWIVSASDDQTIRIWNW 122
Query: 506 RSPNCQGLM--HLSGRPVAAYDP-EGLIFAAGVNSESIKLYDLRSFDK 640
+S C ++ H A++ P E L+ +A ++ ++++++D+ + K
Sbjct: 123 QSRTCISVLTGHNHYVMCASFHPKEDLVVSASLD-QTVRVWDIGALKK 169
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/31 (35%), Positives = 18/31 (58%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
GH V ++ +D +S S DK++R+WD
Sbjct: 246 GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWD 276
>At1g71840.1 68414.m08302 transducin family protein / WD-40 repeat
family protein contains Pfam profile:PF00560 Leucine
Rich Repeat (4 copies); Pfam profile:PF00069 Eukaryotic
protein kinase domain; Pfam profile:PF00400 WD domain,
G-beta repeat (7 copies)
Length = 407
Score = 48.0 bits (109), Expect = 7e-06
Identities = 35/149 (23%), Positives = 68/149 (45%)
Frame = +2
Query: 161 DKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
D ++ + FS +G+ L S D + I+D GT ++ G++ + + H + + +
Sbjct: 114 DSVSCLAFSYDGQLLASGGLDGVVQIFDASSGTLKCVLDGPGAGIEWVRW-HPRGHIVLA 172
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
++ D ++ + Y+ F GH V +P +GS D +L +W+ ++ C
Sbjct: 173 GSE-DCSLWMWNADKEAYLNMFSGHNLNVTCGDFTPDGKLICTGSDDASLIVWNPKT--C 229
Query: 521 QGLMHLSGRPVAAYDPEGLIFAAGVNSES 607
+ + + G P Y EGL +NS S
Sbjct: 230 ESIHIVKGHP---YHTEGLT-CLDINSNS 254
Score = 42.7 bits (96), Expect = 3e-04
Identities = 26/114 (22%), Positives = 54/114 (47%), Gaps = 4/114 (3%)
Frame = +2
Query: 179 DFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD-LIHFTHAKNTAIHSSTKVD 355
DF+P+G+ + + S+D +++++ + + V Y + L N+++ S D
Sbjct: 204 DFTPDGKLICTGSDDASLIVWNPKTCESIHIVKGHPYHTEGLTCLDINSNSSLAISGSKD 263
Query: 356 DTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTF---LSGSLDKTLRLWDLR 508
++ +++ K + HT V + SP T +G +DK L +WDL+
Sbjct: 264 GSVHIVNIVTGKVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQ 317
Score = 37.5 bits (83), Expect = 0.009
Identities = 28/137 (20%), Positives = 56/137 (40%)
Frame = +2
Query: 125 SFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLI 304
S + K +T+ + +D + N IS S+D + I + G + ++NS V+ +
Sbjct: 231 SIHIVKGHPYHTEGLTCLDINSNSSLAISGSKDGSVHIVNIVTGKVVSSLNSHTDSVECV 290
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
F+ + T ++T D + + R+ H + V ++ +G +
Sbjct: 291 KFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSLTWIGTSKYLATGCANG 350
Query: 485 TLRLWDLRSPNCQGLMH 535
T+ +WD NC H
Sbjct: 351 TVSIWDSLLGNCVHTYH 367
Score = 32.3 bits (70), Expect = 0.35
Identities = 26/127 (20%), Positives = 52/127 (40%), Gaps = 3/127 (2%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETL---ISCSEDDQIVIYDCEKGTQMITVNSKKYGVDL 301
KV +TD + + FSP+ T+ + D +++I+D + T ++ L
Sbjct: 275 KVVSSLNSHTDSVECVKFSPSSATIPLAATGGMDKKLIIWDLQHSTPRFICEHEEGVTSL 334
Query: 302 IHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLD 481
+K A + + T+ + + GH V + +S D +S S+D
Sbjct: 335 TWIGTSKYLATGCA---NGTVSIWDSLLGNCVHTYHGHQDAVQAISVSTNTDFIVSVSVD 391
Query: 482 KTLRLWD 502
T R+++
Sbjct: 392 NTARVFE 398
>At1g62020.1 68414.m06995 coatomer protein complex, subunit alpha,
putative contains Pfam PF00400: WD domain, G-beta
repeat; similar to Coatomer alpha subunit (Alpha-coat
protein) (Alpha-COP) (HEPCOP) (HEP-COP) (SP:P53621)
[Homo sapiens]
Length = 1216
Score = 48.0 bits (109), Expect = 7e-06
Identities = 28/120 (23%), Positives = 53/120 (44%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F E+ + + F + +S +D +I +++ + + T+ + + F H
Sbjct: 47 FDEHEGPVRGVHFHNSQPLFVSGGDDYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYP 106
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
+ +S D TIR + + GH V+ P ED +S SLD+T+R+WD+
Sbjct: 107 WIVSASD--DQTIRIWNWQSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDI 164
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/168 (18%), Positives = 79/168 (47%), Gaps = 3/168 (1%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F ++++ + F P +++ I ++D GT + + + V +HF +++
Sbjct: 5 FETKSNRVKGLSFHPKRPWILASLHSGVIQLWDYRMGTLIDRFDEHEGPVRGVHFHNSQP 64
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
+ D I+ + +++ + GH + T+ +S S D+T+R+W+
Sbjct: 65 LFVSGGD--DYKIKVWNYKNHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIWNW 122
Query: 506 RSPNCQGLM--HLSGRPVAAYDP-EGLIFAAGVNSESIKLYDLRSFDK 640
+S C ++ H A++ P E L+ +A ++ ++++++D+ + K
Sbjct: 123 QSRTCVSVLTGHNHYVMCASFHPKEDLVVSASLD-QTVRVWDIGALRK 169
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD-LRSPNCQGLMHLSGR-PVAAYDPEGLIF 583
GH V ++ +D +S S DK++R+WD + Q R + A PE +
Sbjct: 246 GHMNNVSSVMFHAKQDIIVSNSEDKSIRVWDATKRTGLQTFRREHDRFWILAVHPEMNLL 305
Query: 584 AAGVNSESI 610
AAG +S I
Sbjct: 306 AAGHDSGMI 314
>At1g49040.1 68414.m05498 stomatal cytokinesis defective / SCD1
protein (SCD1) contains Pfam PF02141: DENN (AEX-3)
domain; contains Pfam PF00400: WD domain, G-beta repeat
(8 copies); identical to stomatal cytokinesis defective
[Arabidopsis thaliana] GI:19743728; supporting cDNA
gi|19743727|gb|AY082605.1|; PMID 12874123
Length = 1187
Score = 46.4 bits (105), Expect = 2e-05
Identities = 27/125 (21%), Positives = 57/125 (45%)
Frame = +2
Query: 191 NGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRY 370
+GE +++ + D + ++D T M + ++ + +T I ++ D
Sbjct: 949 SGERVLTAAHDGTVKMWDVR--TDMCVATVGRCSSAILSLEYDDSTGILAAAGRDTVANI 1006
Query: 371 LSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRP 550
+ K + GHTK + ++ + VEDT ++GS D T R+W + +C ++ P
Sbjct: 1007 WDIRSGKQMHKLKGHTKWIRSIRM--VEDTLITGSDDWTARVWSVSRGSCDAVLACHAGP 1064
Query: 551 VAAYD 565
V + +
Sbjct: 1065 VQSVE 1069
>At1g04510.1 68414.m00442 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cell cycle control protein cwf8 (SP:O14011)
[Schizosaccharomyces pombe (Fission yeast)]
Length = 523
Score = 46.0 bits (104), Expect = 3e-05
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 8/169 (4%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNT 328
+ N I S+D + + + + D V++D G + T+ V I F +
Sbjct: 219 KTNKPGIFSMDILHSKDVIATGGIDTTAVLFDRPSGQILSTLTGHSKKVTSIKFVGDTDL 278
Query: 329 AIHSSTKVDDTIRYLSL-HDNKYI--RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ +S+ D T+R D Y H+ +V + + F+S SLD T +
Sbjct: 279 VLTASS--DKTVRIWGCSEDGNYTSRHTLKDHSAEVRAVTVHATNKYFVSASLDSTWCFY 336
Query: 500 DLRSPNCQG-LMHLSGRPV----AAYDPEGLIFAAGVNSESIKLYDLRS 631
DL S C + S V AA+ P+GLI G +K++D++S
Sbjct: 337 DLSSGLCLAQVTDASENDVNYTAAAFHPDGLILGTGTAQSIVKIWDVKS 385
>At3g44530.1 68416.m04786 transducin family protein / WD-40 repeat
family protein contains 6 (4 significant) WD-40 repeats
(PF0400); nuclear protein HIRA, mouse, PIR:S68141
Length = 1051
Score = 45.6 bits (103), Expect = 4e-05
Identities = 24/79 (30%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAY 562
K + GHT VV + SP + SGSLD T+ +W++R+ C ++ HLS +
Sbjct: 109 KAVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTW 168
Query: 563 DPEGLIFAAGVNSESIKLY 619
DP G A+ + +++ ++
Sbjct: 169 DPIGSFIASQSDDKTVIIW 187
Score = 29.5 bits (63), Expect = 2.5
Identities = 24/138 (17%), Positives = 56/138 (40%), Gaps = 15/138 (10%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNS---------- 280
++ R++ +N + ++ N + S S+D I I++ + G+ S
Sbjct: 50 RLLATLRDHFGSVNCVRWAKNSRYVASGSDDQVIQIHERKPGSGTTEFGSGEAPDVENWK 109
Query: 281 -----KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLS 445
+ + D++ + + ++ +S +D+T+ ++ GH V +
Sbjct: 110 AVMTLRGHTADVVDLNWSPDDSMLASGSLDNTVHIWNMRTGMCTTVLRGHLSLVKGVTWD 169
Query: 446 PVEDTFLSGSLDKTLRLW 499
P+ S S DKT+ +W
Sbjct: 170 PIGSFIASQSDDKTVIIW 187
>At1g52360.1 68414.m05909 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to (SP:O55029) Coatomer
beta' subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:O55029) [Mus musculus]; similar to GI:298096 from
[Homo sapiens]
Length = 926
Score = 45.6 bits (103), Expect = 4e-05
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV-NSKKYGVDLIHFTH 316
KVF ++D I + P ++S S+D I ++D EKG + + V + F +
Sbjct: 93 KVFEAHSDYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWACTQIFEGHSHYVMQVTF-N 151
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKV--VTMCLSPVEDTFLSGSLDKTL 490
K+T +S +D TI+ +L H K V V + ++GS D T
Sbjct: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFTGGDKPYLITGSDDHTA 211
Query: 491 RLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF 634
++WD ++ +C + H + PE I G +++++ ++
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSEDGTVRIWHATTY 261
Score = 44.8 bits (101), Expect = 6e-05
Identities = 26/127 (20%), Positives = 54/127 (42%), Gaps = 1/127 (0%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD 298
+ + ++F ++ + + F+P T S S D I I++ T+++ + GV+
Sbjct: 130 KGWACTQIFEGHSHYVMQVTFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVN 189
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSL 478
+ + + + D T + ++ GHT V +C P ++GS
Sbjct: 190 CVDYFTGGDKPYLITGSDDHTAKVWDYQTKSCVQTLEGHTHNVSAVCFHPELPIIITGSE 249
Query: 479 DKTLRLW 499
D T+R+W
Sbjct: 250 DGTVRIW 256
>At5g50230.1 68418.m06221 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to TIPD PROTEIN (SP:O15736)[Dictyostelium
discoideum]
Length = 515
Score = 45.2 bits (102), Expect = 5e-05
Identities = 33/155 (21%), Positives = 69/155 (44%), Gaps = 2/155 (1%)
Frame = +2
Query: 173 SIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKV 352
SI F N TL + +D + ++D GT + ++ + + TH + I +++
Sbjct: 236 SIVFEYNSGTLFTGGQDRAVKMWDTNSGTLIKSLYGSLGNILDMAVTHDNKSVIAATSS- 294
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLWDLRSPNCQG- 526
+ + + + GHT KV + +S + S + D+T++LWDL C
Sbjct: 295 -NNLFVWDVSSGRVRHTLTGHTDKVCAVDVSKFSSRHVVSAAYDRTIKLWDLHKGYCTNT 353
Query: 527 LMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
++ S +GL +G +++L+D+++
Sbjct: 354 VLFTSNCNAICLSIDGLTVFSGHMDGNLRLWDIQT 388
Score = 32.7 bits (71), Expect = 0.27
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 2/142 (1%)
Frame = +2
Query: 158 TDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIH 337
T N+I S +G T+ S D + ++D + G + V V + + N +
Sbjct: 357 TSNCNAICLSIDGLTVFSGHMDGNLRLWDIQTGKLLSEVAGHSSAVTSVSLSRNGNRILT 416
Query: 338 SST-KVDDTIRYLSLHDNKYIRYFPGH-TKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
S V + +L +R C+SP +D +GS D ++ +W L
Sbjct: 417 SGRDNVHNVFDTRTLEICGTLRASGNRLASNWSRSCISPDDDYVAAGSADGSVHVWSLSK 476
Query: 512 PNCQGLMHLSGRPVAAYDPEGL 577
N ++ P+ G+
Sbjct: 477 GNIVSILKEQTSPILCCSWSGI 498
>At1g79990.1 68414.m09356 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:P35606)
[Homo sapiens]; similar to Coatomer beta' subunit
(Beta'-coat protein) (Beta'-COP) (p102) (SP:O55029) [Mus
musculus]
Length = 920
Score = 45.2 bits (102), Expect = 5e-05
Identities = 39/170 (22%), Positives = 73/170 (42%), Gaps = 5/170 (2%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV-NSKKYGVDLIHFTH 316
KVF + D I + P ++S S+D I ++D EKG + + V + F +
Sbjct: 93 KVFEAHADYIRCVAVHPTLPYVLSSSDDMLIKLWDWEKGWLCTQIFEGHSHYVMQVTF-N 151
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKV--VTMCLSPVEDTFLSGSLDKTL 490
K+T +S +D TI+ +L H K V V + ++GS D T
Sbjct: 152 PKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHLKGVNCVDYFTGGDKPYLITGSDDHTA 211
Query: 491 RLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSF 634
++WD ++ +C + H ++ PE I G +++++ ++
Sbjct: 212 KVWDYQTKSCVQTLEGHTHNVSAVSFHPELPIIITGSEDGTVRIWHATTY 261
>At2g32700.5 68415.m04001 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 785
Score = 44.4 bits (100), Expect = 8e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDC-EKGTQMITVNSKKYGV 295
+ + +V E+ I + F PN L + S D I I+D + G + T++ V
Sbjct: 537 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 596
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
I F H K T + S ++ IR+ ++ + +R G + +V P FL+ +
Sbjct: 597 MSIDF-HPKKTELLCSCDSNNDIRFWDINAS-CVRAVKGASTQV---RFQPRTGQFLAAA 651
Query: 476 LDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 637
+ T+ ++D+ + N + + H S + P G + A V+ +++KL+ L S D
Sbjct: 652 SENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGD 707
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 INSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
+ SIDF P E L SC ++ I +D V + K + F + ++
Sbjct: 596 VMSIDFHPKKTELLCSCDSNNDIRFWDINASC----VRAVKGASTQVRFQPRTGQFLAAA 651
Query: 344 TKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ ++T+ + ++NK + F GH+ V ++C SP + S S D ++LW L S +C
Sbjct: 652 S--ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC 708
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKYGVDLI 304
K +F+ ++ ++S+ +SPNGE + S SE D + ++ G ++ + K+ +
Sbjct: 666 KRVNIFKGHSSNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHELSNSGNKFHSVVF 724
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
H ++ I I + +NK + GH + + SP S S DK
Sbjct: 725 HPSYPDLLVIGGY----QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDK 779
Query: 485 TLRLW 499
++++W
Sbjct: 780 SVKIW 784
>At2g32700.4 68415.m04000 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 44.4 bits (100), Expect = 8e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDC-EKGTQMITVNSKKYGV 295
+ + +V E+ I + F PN L + S D I I+D + G + T++ V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
I F H K T + S ++ IR+ ++ + +R G + +V P FL+ +
Sbjct: 599 MSIDF-HPKKTELLCSCDSNNDIRFWDINAS-CVRAVKGASTQV---RFQPRTGQFLAAA 653
Query: 476 LDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 637
+ T+ ++D+ + N + + H S + P G + A V+ +++KL+ L S D
Sbjct: 654 SENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGD 709
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 INSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
+ SIDF P E L SC ++ I +D V + K + F + ++
Sbjct: 598 VMSIDFHPKKTELLCSCDSNNDIRFWDINASC----VRAVKGASTQVRFQPRTGQFLAAA 653
Query: 344 TKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ ++T+ + ++NK + F GH+ V ++C SP + S S D ++LW L S +C
Sbjct: 654 S--ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC 710
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKYGVDLI 304
K +F+ ++ ++S+ +SPNGE + S SE D + ++ G ++ + K+ +
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHELSNSGNKFHSVVF 726
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
H ++ I I + +NK + GH + + SP S S DK
Sbjct: 727 HPSYPDLLVIGGY----QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDK 781
Query: 485 TLRLW 499
++++W
Sbjct: 782 SVKIW 786
>At2g32700.3 68415.m03999 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 44.4 bits (100), Expect = 8e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDC-EKGTQMITVNSKKYGV 295
+ + +V E+ I + F PN L + S D I I+D + G + T++ V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
I F H K T + S ++ IR+ ++ + +R G + +V P FL+ +
Sbjct: 599 MSIDF-HPKKTELLCSCDSNNDIRFWDINAS-CVRAVKGASTQV---RFQPRTGQFLAAA 653
Query: 476 LDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 637
+ T+ ++D+ + N + + H S + P G + A V+ +++KL+ L S D
Sbjct: 654 SENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGD 709
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 INSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
+ SIDF P E L SC ++ I +D V + K + F + ++
Sbjct: 598 VMSIDFHPKKTELLCSCDSNNDIRFWDINASC----VRAVKGASTQVRFQPRTGQFLAAA 653
Query: 344 TKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ ++T+ + ++NK + F GH+ V ++C SP + S S D ++LW L S +C
Sbjct: 654 S--ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC 710
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKYGVDLI 304
K +F+ ++ ++S+ +SPNGE + S SE D + ++ G ++ + K+ +
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHELSNSGNKFHSVVF 726
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
H ++ I I + +NK + GH + + SP S S DK
Sbjct: 727 HPSYPDLLVIGGY----QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDK 781
Query: 485 TLRLW 499
++++W
Sbjct: 782 SVKIW 786
>At2g32700.2 68415.m03998 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 44.4 bits (100), Expect = 8e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDC-EKGTQMITVNSKKYGV 295
+ + +V E+ I + F PN L + S D I I+D + G + T++ V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
I F H K T + S ++ IR+ ++ + +R G + +V P FL+ +
Sbjct: 599 MSIDF-HPKKTELLCSCDSNNDIRFWDINAS-CVRAVKGASTQV---RFQPRTGQFLAAA 653
Query: 476 LDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 637
+ T+ ++D+ + N + + H S + P G + A V+ +++KL+ L S D
Sbjct: 654 SENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGD 709
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 INSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
+ SIDF P E L SC ++ I +D V + K + F + ++
Sbjct: 598 VMSIDFHPKKTELLCSCDSNNDIRFWDINASC----VRAVKGASTQVRFQPRTGQFLAAA 653
Query: 344 TKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ ++T+ + ++NK + F GH+ V ++C SP + S S D ++LW L S +C
Sbjct: 654 S--ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC 710
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKYGVDLI 304
K +F+ ++ ++S+ +SPNGE + S SE D + ++ G ++ + K+ +
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHELSNSGNKFHSVVF 726
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
H ++ I I + +NK + GH + + SP S S DK
Sbjct: 727 HPSYPDLLVIGGY----QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDK 781
Query: 485 TLRLW 499
++++W
Sbjct: 782 SVKIW 786
>At2g32700.1 68415.m03997 WD-40 repeat family protein contains 7 WD-40
repeats ; similar to LEUNIG (GP:11141605)[Arabidopsis
thaliana]
Length = 787
Score = 44.4 bits (100), Expect = 8e-05
Identities = 43/177 (24%), Positives = 81/177 (45%), Gaps = 4/177 (2%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDC-EKGTQMITVNSKKYGV 295
+ + +V E+ I + F PN L + S D I I+D + G + T++ V
Sbjct: 539 METLQVESTPEEHAHIITDVRFRPNSTQLATSSFDKTIKIWDASDPGYFLRTISGHAAPV 598
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
I F H K T + S ++ IR+ ++ + +R G + +V P FL+ +
Sbjct: 599 MSIDF-HPKKTELLCSCDSNNDIRFWDINAS-CVRAVKGASTQV---RFQPRTGQFLAAA 653
Query: 476 LDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFD 637
+ T+ ++D+ + N + + H S + P G + A V+ +++KL+ L S D
Sbjct: 654 SENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGEL-VASVSEDAVKLWSLSSGD 709
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 2/120 (1%)
Frame = +2
Query: 167 INSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
+ SIDF P E L SC ++ I +D V + K + F + ++
Sbjct: 598 VMSIDFHPKKTELLCSCDSNNDIRFWDINASC----VRAVKGASTQVRFQPRTGQFLAAA 653
Query: 344 TKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ ++T+ + ++NK + F GH+ V ++C SP + S S D ++LW L S +C
Sbjct: 654 S--ENTVSIFDIENNNKRVNIFKGHSSNVHSVCWSPNGELVASVSED-AVKLWSLSSGDC 710
Score = 36.3 bits (80), Expect = 0.022
Identities = 28/125 (22%), Positives = 56/125 (44%), Gaps = 2/125 (1%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKYGVDLI 304
K +F+ ++ ++S+ +SPNGE + S SE D + ++ G ++ + K+ +
Sbjct: 668 KRVNIFKGHSSNVHSVCWSPNGELVASVSE-DAVKLWSLSSGDCIHELSNSGNKFHSVVF 726
Query: 305 HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDK 484
H ++ I I + +NK + GH + + SP S S DK
Sbjct: 727 HPSYPDLLVIGGY----QAIELWNTMENKCMT-VAGHECVISALAQSPSTGVVASASHDK 781
Query: 485 TLRLW 499
++++W
Sbjct: 782 SVKIW 786
>At3g18140.1 68416.m02306 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Pop3 (GP:3434986) [Schizosaccharomyces pombe]
Length = 305
Score = 44.0 bits (99), Expect = 1e-04
Identities = 34/146 (23%), Positives = 64/146 (43%), Gaps = 3/146 (2%)
Frame = +2
Query: 203 LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLH 382
L + S D I ++ E G T+ V+ + T K+ + + + IR ++
Sbjct: 8 LATASYDHTIRFWEAETGRCYRTIQYPDSHVNRLEITPDKH---YLAAACNPHIRLFDVN 64
Query: 383 DN--KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQ-GLMHLSGRPV 553
N + + + HT V+ + SGS D T+++WDLR+P CQ ++
Sbjct: 65 SNSPQPVMTYDSHTNNVMAVGFQCDAKWMYSGSEDGTVKIWDLRAPGCQKEYESVAAVNT 124
Query: 554 AAYDPEGLIFAAGVNSESIKLYDLRS 631
P +G + +I+++DLR+
Sbjct: 125 VVLHPNQTELISGDQNGNIRVWDLRA 150
Score = 30.3 bits (65), Expect = 1.4
Identities = 12/32 (37%), Positives = 20/32 (62%)
Frame = +2
Query: 425 VVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
V T+ L P + +SG + +R+WDLR+ +C
Sbjct: 122 VNTVVLHPNQTELISGDQNGNIRVWDLRANSC 153
>At1g48630.1 68414.m05440 guanine nucleotide-binding family protein
/ activated protein kinase C receptor, putative / RACK,
putative contains 7 WD-40 repeats (PF00400); very
similar to guanine nucleotide-binding protein; activated
protein kinase C receptor; RACK1 (GI:9294068)
{Arabidopsis thaliana}; similar to WD-40 repeat
auxin-dependent protein ARCA (SP:O24456) [Arabidopsis
thaliana];
Length = 326
Score = 44.0 bits (99), Expect = 1e-04
Identities = 45/161 (27%), Positives = 78/161 (48%), Gaps = 8/161 (4%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSST 346
+ + S +G+ +S S D ++ ++D G V + F+ N I S++
Sbjct: 66 VQDVVLSSDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFS-TDNRQIVSAS 124
Query: 347 KVDDTIR-YLSLHDNKY-IRYFPGHTKKVVTMCLSP--VEDTFLSGSLDKTLRLWDLRSP 514
+ D TI+ + +L + KY I GH + V + SP + T +S S DKT+++W+L+
Sbjct: 125 R-DRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQ-- 181
Query: 515 NCQGLMHLSGRP----VAAYDPEGLIFAAGVNSESIKLYDL 625
NC+ L+G A P+G + A+G I L+DL
Sbjct: 182 NCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 40.7 bits (91), Expect = 0.001
Identities = 29/121 (23%), Positives = 54/121 (44%), Gaps = 5/121 (4%)
Frame = +2
Query: 155 NTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH----A 319
+TD + +I N + +++ S D I+++ K + V ++ HF +
Sbjct: 14 HTDMVTAIATPVDNSDVIVTSSRDKSIILWKLTKEDKSYGVAQRRM-TGHSHFVQDVVLS 72
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ S D +R L + R F GHTK V+++ S +S S D+T++LW
Sbjct: 73 SDGQFALSGSWDGELRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSASRDRTIKLW 132
Query: 500 D 502
+
Sbjct: 133 N 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 30/122 (24%), Positives = 52/122 (42%), Gaps = 2/122 (1%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDC--EKGTQMITVNSKKYGVDLIHFTHA 319
F +T + S+ FS + ++S S D I +++ E + + K V + F+
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNTLGECKYTISEADGHKEWVSCVRFSPN 160
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
S D T++ +L + K GH+ + T+ +SP SG D + LW
Sbjct: 161 TLVPTIVSASWDKTVKVWNLQNCKLRNTLAGHSGYLNTVAVSPDGSLCASGGKDGVILLW 220
Query: 500 DL 505
DL
Sbjct: 221 DL 222
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
R GH+ V + LS LSGS D LRLWDL
Sbjct: 57 RRMTGHSHFVQDVVLSSDGQFALSGSWDGELRLWDL 92
>At4g04940.1 68417.m00718 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats
Length = 910
Score = 43.6 bits (98), Expect = 1e-04
Identities = 20/72 (27%), Positives = 36/72 (50%)
Frame = +2
Query: 290 GVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLS 469
G L+ + + + ++ D IR + K +R F GHT ++ +C S +S
Sbjct: 515 GCSLVKIVYHRVNGLLATVADDFVIRLYDVVTLKMVREFRGHTDRITDLCFSEDGKWVIS 574
Query: 470 GSLDKTLRLWDL 505
S+D +LR+WD+
Sbjct: 575 SSMDGSLRIWDV 586
Score = 34.7 bits (76), Expect = 0.066
Identities = 18/50 (36%), Positives = 32/50 (64%)
Frame = +2
Query: 95 MMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYD 244
+++L D V + K+ + FR +TD+I + FS +G+ +IS S D + I+D
Sbjct: 538 VIRLYDVV--TLKMVREFRGHTDRITDLCFSEDGKWVISSSMDGSLRIWD 585
>At3g15980.3 68416.m02022 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
++F ++ + + F+P T S S D I I++ T+++ + GV+ + +
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
+ + D T + ++ GHT V +C P ++GS D T+R+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Query: 497 W 499
W
Sbjct: 256 W 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFT 313
+ K F + S F P + +++ ++D I +Y+ M V + D I
Sbjct: 49 ITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT---MDKVKVFEAHSDYIRCV 105
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYI--RYFPGHTKKVVTMCLSPVE-DTFLSGSLDK 484
T + + DD + L +N + + F GH+ V+ + +P + +TF S SLD+
Sbjct: 106 AVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDR 165
Query: 485 TLRLWDLRSPN 517
T+++W+L SP+
Sbjct: 166 TIKIWNLGSPD 176
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV--AAYDPE 571
R F +++V ++ L P E L+ T+ +W+ ++ ++ PV A + P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 572 GLIFAAGVNSESIKLYDLRSFDK 640
AG + I++Y+ + DK
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDK 91
>At3g15980.2 68416.m02021 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 918
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
++F ++ + + F+P T S S D I I++ T+++ + GV+ + +
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
+ + D T + ++ GHT V +C P ++GS D T+R+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Query: 497 W 499
W
Sbjct: 256 W 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFT 313
+ K F + S F P + +++ ++D I +Y+ M V + D I
Sbjct: 49 ITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT---MDKVKVFEAHSDYIRCV 105
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYI--RYFPGHTKKVVTMCLSPVE-DTFLSGSLDK 484
T + + DD + L +N + + F GH+ V+ + +P + +TF S SLD+
Sbjct: 106 AVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDR 165
Query: 485 TLRLWDLRSPN 517
T+++W+L SP+
Sbjct: 166 TIKIWNLGSPD 176
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV--AAYDPE 571
R F +++V ++ L P E L+ T+ +W+ ++ ++ PV A + P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 572 GLIFAAGVNSESIKLYDLRSFDK 640
AG + I++Y+ + DK
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDK 91
>At3g15980.1 68416.m02020 coatomer protein complex, subunit beta 2
(beta prime), putative contains 7 WD-40 repeats
(PF00400) (1 weak); identical to coatomer protein
complex, beta prime (beta'-COP) protein {Arabidopsis
thaliana} (GI:9294445); similar to Coatomer beta'
subunit (Beta'-coat protein) (Beta'-COP) (p102)
(SP:P35606) [Homo sapiens]
Length = 909
Score = 43.6 bits (98), Expect = 1e-04
Identities = 26/121 (21%), Positives = 52/121 (42%), Gaps = 1/121 (0%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
++F ++ + + F+P T S S D I I++ T+++ + GV+ + +
Sbjct: 136 QIFEGHSHYVMQVVFNPKDTNTFASASLDRTIKIWNLGSPDPNFTLDAHQKGVNCVDYFT 195
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
+ + D T + ++ GHT V +C P ++GS D T+R+
Sbjct: 196 GGDKPYLITGSDDHTAKVWDYQTKSCVQTLDGHTHNVSAVCFHPELPIIITGSEDGTVRI 255
Query: 497 W 499
W
Sbjct: 256 W 256
Score = 43.2 bits (97), Expect = 2e-04
Identities = 33/131 (25%), Positives = 62/131 (47%), Gaps = 3/131 (2%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFT 313
+ K F + S F P + +++ ++D I +Y+ M V + D I
Sbjct: 49 ITKSFEVTELPVRSAKFIPRKQWVVAGADDMYIRVYNYNT---MDKVKVFEAHSDYIRCV 105
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYI--RYFPGHTKKVVTMCLSPVE-DTFLSGSLDK 484
T + + DD + L +N + + F GH+ V+ + +P + +TF S SLD+
Sbjct: 106 AVHPTLPYVLSSSDDMLIKLWDWENGWACTQIFEGHSHYVMQVVFNPKDTNTFASASLDR 165
Query: 485 TLRLWDLRSPN 517
T+++W+L SP+
Sbjct: 166 TIKIWNLGSPD 176
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/83 (22%), Positives = 38/83 (45%), Gaps = 2/83 (2%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV--AAYDPE 571
R F +++V ++ L P E L+ T+ +W+ ++ ++ PV A + P
Sbjct: 9 RKFAQRSERVKSVDLHPTEPWILASLYSGTVCIWNYQTQTITKSFEVTELPVRSAKFIPR 68
Query: 572 GLIFAAGVNSESIKLYDLRSFDK 640
AG + I++Y+ + DK
Sbjct: 69 KQWVVAGADDMYIRVYNYNTMDK 91
>At2g46280.3 68415.m05757 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 254
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
GH K + ++C + + FL+GSLDKT +LWD+R+
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRT 224
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
+ GH V +S ++GS D+T +LWD++S
Sbjct: 48 YRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
>At2g46280.2 68415.m05756 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
GH K + ++C + + FL+GSLDKT +LWD+R+
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRT 224
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
+ GH V +S ++GS D+T +LWD++S
Sbjct: 48 YRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
>At2g46280.1 68415.m05755 eukaryotic translation initiation factor 3
subunit 2 / TGF-beta receptor interacting protein 1 /
eIF-3 beta / eIF3i / TRIP-1 (TIF3I1) identical to
eukaryotic translation initiation factor 3 subunit 2
(SP:Q38884) {Arabidopsis thaliana}; contains Pfam
PF00400: WD domain, G-beta repeat (5 copies)
Length = 328
Score = 43.6 bits (98), Expect = 1e-04
Identities = 16/34 (47%), Positives = 25/34 (73%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
GH K + ++C + + FL+GSLDKT +LWD+R+
Sbjct: 191 GHKKDITSLCKAADDSHFLTGSLDKTAKLWDMRT 224
Score = 28.3 bits (60), Expect = 5.8
Identities = 12/36 (33%), Positives = 20/36 (55%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
+ GH V +S ++GS D+T +LWD++S
Sbjct: 48 YRGHNGAVWCCDVSRDSSRLITGSADQTAKLWDVKS 83
>At3g18130.1 68416.m02305 guanine nucleotide-binding family protein
/ activated protein kinase C receptor (RACK1) identical
to guanine nucleotide-binding protein; activated protein
kinase C receptor; RACK1 (GI:9294068) {Arabidopsis
thaliana}; contains Pfam profile: PF00400 WD domain,
G-beta repeat (7 copies)
Length = 326
Score = 43.2 bits (97), Expect = 2e-04
Identities = 30/125 (24%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Frame = +2
Query: 143 VFRENTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH- 316
+ R +TD + +I N + +++ S D I+++ K + V ++ HF
Sbjct: 10 IMRAHTDIVTAIATPIDNSDIIVTASRDKSIILWKLTKDDKSYGVAQRRL-TGHSHFVED 68
Query: 317 ---AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKT 487
+ + S D +R L + R F GHTK V+++ S +S S D+T
Sbjct: 69 VVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFSTDNRQIVSASRDRT 128
Query: 488 LRLWD 502
++LW+
Sbjct: 129 IKLWN 133
Score = 42.3 bits (95), Expect = 3e-04
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 6/159 (3%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSST 346
+ + S +G+ +S S D ++ ++D G V + F+ N I S++
Sbjct: 66 VEDVVLSSDGQFALSGSWDGELRLWDLATGETTRRFVGHTKDVLSVAFS-TDNRQIVSAS 124
Query: 347 KVDDTIR-YLSLHDNKY-IRYFPGHTKKVVTMCLSP--VEDTFLSGSLDKTLRLWDLRSP 514
+ D TI+ + +L + KY I GH + V + SP + T +S S DKT+++W+L++
Sbjct: 125 R-DRTIKLWNTLGECKYTISEGDGHKEWVSCVRFSPNTLVPTIVSASWDKTVKVWNLQNC 183
Query: 515 NCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
+ + H A P+G + A+G I L+DL
Sbjct: 184 KLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILLWDL 222
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/123 (25%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNS---KKYGVDLIHFTH 316
F +T + S+ FS + ++S S D I +++ G T++ K V + F+
Sbjct: 101 FVGHTKDVLSVAFSTDNRQIVSASRDRTIKLWNT-LGECKYTISEGDGHKEWVSCVRFSP 159
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
S D T++ +L + K GH+ + T+ +SP SG D + L
Sbjct: 160 NTLVPTIVSASWDKTVKVWNLQNCKLRNSLVGHSGYLNTVAVSPDGSLCASGGKDGVILL 219
Query: 497 WDL 505
WDL
Sbjct: 220 WDL 222
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
R GH+ V + LS LSGS D LRLWDL
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 92
>At2g43770.1 68415.m05441 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to U5 snRNP-specific 40 kDa protein (GI:3820594)
[Homo sapiens]
Length = 343
Score = 43.2 bits (97), Expect = 2e-04
Identities = 43/182 (23%), Positives = 77/182 (42%), Gaps = 11/182 (6%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLI-SCSEDDQIVIYDCEKGTQMITVNSKKYGV 295
V + K K E++ +NS + G LI S S+D ++D + + T K Y +
Sbjct: 125 VETGKQIKKMAEHSSFVNSCCPTRRGPPLIISGSDDGTAKLWDMRQRGAIQTFPDK-YQI 183
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
+ F+ A + VD+ ++ L + GH + M LSP L+
Sbjct: 184 TAVSFSDAADKIFTGG--VDNDVKVWDLRKGEATMTLEGHQDTITGMSLSPDGSYLLTNG 241
Query: 476 LDKTLRLWDLR--SP--NC----QGLMHLSGRPV--AAYDPEGLIFAAGVNSESIKLYDL 625
+D L +WD+R +P C +G H + + ++ P+G AG + + ++D
Sbjct: 242 MDNKLCVWDMRPYAPQNRCVKIFEGHQHNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDT 301
Query: 626 RS 631
S
Sbjct: 302 TS 303
Score = 33.5 bits (73), Expect = 0.15
Identities = 19/57 (33%), Positives = 25/57 (43%)
Frame = +2
Query: 395 IRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAAYD 565
I GH V TM +P SGS D+ + LW + +C+ M L G A D
Sbjct: 46 IMLLSGHPSAVYTMKFNPAGTLIASGSHDREIFLWRVHG-DCKNFMVLKGHKNAILD 101
Score = 29.9 bits (64), Expect = 1.9
Identities = 24/135 (17%), Positives = 53/135 (39%), Gaps = 6/135 (4%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE------KGTQMITVNS 280
+R + + D I + SP+G L++ D+++ ++D + ++ +
Sbjct: 209 LRKGEATMTLEGHQDTITGMSLSPDGSYLLTNGMDNKLCVWDMRPYAPQNRCVKIFEGHQ 268
Query: 281 KKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT 460
+ +L+ + + + ++ D + + I PGHT V P E
Sbjct: 269 HNFEKNLLKCSWSPDGTKVTAGSSDRMVHIWDTTSRRTIYKLPGHTGSVNECVFHPTEPI 328
Query: 461 FLSGSLDKTLRLWDL 505
S S DK + L ++
Sbjct: 329 IGSCSSDKNIYLGEI 343
>At1g29260.1 68414.m03578 peroxisomal targeting signal type 2
receptor (PEX7) identical to peroxisomal targeting
signal type 2 receptor (Pex7p) (GI:9502414) [Arabidopsis
thaliana]; WD-40 repeat protein family member; contains
6 WD-40 repeats (PF00400); similar to peroxismal
targeting signal 2 receptor (PTS2R) (Peroxin-7)
(PEX7)(SP:O00628) [Homo sapiens]
Length = 317
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/169 (22%), Positives = 77/169 (45%), Gaps = 8/169 (4%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNS-KKYG--VDLIHFTHA 319
+ D + + +S + ++ LI+ D + IYD + S +++ V + +
Sbjct: 58 DTADAVYDVCWSESHDSVLIAAIGDGSVKIYDTALPPPSNPIRSFQEHAREVQSVDYNPT 117
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE-DTFLSGSLDKTLRL 496
+ + +S+ DDT++ ++ +R F H V +P D F S S D TLR+
Sbjct: 118 RRDSFLTSSW-DDTVKLWAMDRPASVRTFKEHAYCVYQAVWNPKHGDVFASASGDCTLRI 176
Query: 497 WDLRSPNCQGLMHLSGRPVAAYD---PEGLIFAAGVNSESIKLYDLRSF 634
WD+R P ++ + + D + I A +++K++D+RS+
Sbjct: 177 WDVREPGSTMIIPAHDFEILSCDWNKYDDCILATSSVDKTVKVWDVRSY 225
>At4g34460.3 68417.m04900 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 347
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDLRSPNCQGLMHLSGRP----VAAYDPEG 574
GHT V+++ +S F+SGS D T RLWD R+ + + + G + P+G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 260
Query: 575 LIFAAGVNSESIKLYDLRS 631
F G + + +LYD+R+
Sbjct: 261 YRFGTGSDDGTCRLYDIRT 279
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSK---KYGVDL 301
V+++ + ++ + PN + LI+ S D +++D G + + + D+
Sbjct: 148 VSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 207
Query: 302 IHFT-HAKNTAIHSSTKVDDTIRYLSLHD-NKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
+ + N S D T R ++ +R F GH V T+ P F +GS
Sbjct: 208 LSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGS 267
Query: 476 LDKTLRLWDLRS 511
D T RL+D+R+
Sbjct: 268 DDGTCRLYDIRT 279
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFT-H 316
+ + +T K+ S+D++P ++S S+D ++++++ + + V F+ +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDN----KYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLD 481
++ A V S D R GH V P ED L + S D
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 482 KTLRLWDL 505
+T LWD+
Sbjct: 179 QTCILWDV 186
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD-LRSPNCQGL-MHLSGRPVAAYDPE 571
R GHT KV ++ +P + +S S D L +W+ L S + + + A+ P
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 572 GLIFAAGVNSESIKLYDLRS 631
G A G ++ L S
Sbjct: 119 GQSVACGGLDSVCSIFSLSS 138
>At4g34460.2 68417.m04898 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 315
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDLRSPNCQGLMHLSGRP----VAAYDPEG 574
GHT V+++ +S F+SGS D T RLWD R+ + + + G + P+G
Sbjct: 140 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 198
Query: 575 LIFAAGVNSESIKLYDLRS 631
F G + + +LYD+R+
Sbjct: 199 YRFGTGSDDGTCRLYDIRT 217
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSK---KYGVDL 301
V+++ + ++ + PN + LI+ S D +++D G + + + D+
Sbjct: 86 VSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 145
Query: 302 IHFT-HAKNTAIHSSTKVDDTIRYLSLHD-NKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
+ + N S D T R ++ +R F GH V T+ P F +GS
Sbjct: 146 LSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGS 205
Query: 476 LDKTLRLWDLRS 511
D T RL+D+R+
Sbjct: 206 DDGTCRLYDIRT 217
>At4g34460.1 68417.m04899 guanine nucleotide-binding protein beta
subunit (GB1) / GTP-binding protein beta subunit (AGB1)
/ transducin contains 7 WD-40 repeats (PF00400);
identical to Guanine nucleotide-binding protein beta
subunit.SP:P49177 [Arabidopsis thaliana]; Weiss, CA et
al, PNAS 91:9954 (1994)
Length = 377
Score = 42.7 bits (96), Expect = 3e-04
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 5/79 (6%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDLRSPNCQGLMHLSGRP----VAAYDPEG 574
GHT V+++ +S F+SGS D T RLWD R+ + + + G + P+G
Sbjct: 202 GHTADVLSVSISGSNPNWFISGSCDSTARLWDTRAAS-RAVRTFHGHEGDVNTVKFFPDG 260
Query: 575 LIFAAGVNSESIKLYDLRS 631
F G + + +LYD+R+
Sbjct: 261 YRFGTGSDDGTCRLYDIRT 279
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/132 (23%), Positives = 57/132 (43%), Gaps = 6/132 (4%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSK---KYGVDL 301
V+++ + ++ + PN + LI+ S D +++D G + + + D+
Sbjct: 148 VSRMLTGHRGYVSCCQYVPNEDAHLITSSGDQTCILWDVTTGLKTSVFGGEFQSGHTADV 207
Query: 302 IHFT-HAKNTAIHSSTKVDDTIRYLSLHD-NKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
+ + N S D T R ++ +R F GH V T+ P F +GS
Sbjct: 208 LSVSISGSNPNWFISGSCDSTARLWDTRAASRAVRTFHGHEGDVNTVKFFPDGYRFGTGS 267
Query: 476 LDKTLRLWDLRS 511
D T RL+D+R+
Sbjct: 268 DDGTCRLYDIRT 279
Score = 31.1 bits (67), Expect = 0.82
Identities = 28/128 (21%), Positives = 53/128 (41%), Gaps = 6/128 (4%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFT-H 316
+ + +T K+ S+D++P ++S S+D ++++++ + + V F+ +
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDN----KYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLD 481
++ A V S D R GH V P ED L + S D
Sbjct: 119 GQSVACGGLDSVCSIFSLSSTADKDGTVPVSRMLTGHRGYVSCCQYVPNEDAHLITSSGD 178
Query: 482 KTLRLWDL 505
+T LWD+
Sbjct: 179 QTCILWDV 186
Score = 28.7 bits (61), Expect = 4.4
Identities = 21/80 (26%), Positives = 34/80 (42%), Gaps = 2/80 (2%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD-LRSPNCQGL-MHLSGRPVAAYDPE 571
R GHT KV ++ +P + +S S D L +W+ L S + + + A+ P
Sbjct: 59 RTLQGHTGKVYSLDWTPERNRIVSASQDGRLIVWNALTSQKTHAIKLPCAWVMTCAFSPN 118
Query: 572 GLIFAAGVNSESIKLYDLRS 631
G A G ++ L S
Sbjct: 119 GQSVACGGLDSVCSIFSLSS 138
>At2g37670.1 68415.m04620 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similiar to rab11 binding
protein (GI:4512103) [Bos taurus]
Length = 903
Score = 42.7 bits (96), Expect = 3e-04
Identities = 28/96 (29%), Positives = 45/96 (46%), Gaps = 2/96 (2%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDLRSPN 517
S+ +D T+R + ++ F H V + SPV++ FLSGSLD +R+W ++ +
Sbjct: 522 SSSMDKTVRLWDIETKTCLKLF-AHNDYVTCIQFSPVDENYFLSGSLDAKIRIWSIQDRH 580
Query: 518 CQGLMHLSGRPVAA-YDPEGLIFAAGVNSESIKLYD 622
L AA Y P+G G + + YD
Sbjct: 581 VVEWSDLHEMVTAACYTPDGQGALIGSHKGICRAYD 616
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/89 (26%), Positives = 41/89 (46%)
Frame = +2
Query: 254 GTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVT 433
G ++ V KK G + ++ I V +T+ S +K + GH ++
Sbjct: 458 GNEITVVEKKKKGKGS---SGRRHNHIPDYVHVPETVFSFS---DKPVCSLKGHLDAILD 511
Query: 434 MCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ S + LS S+DKT+RLWD+ + C
Sbjct: 512 LSWSKSQ-LLLSSSMDKTVRLWDIETKTC 539
>At5g24320.2 68418.m02866 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 698
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSG 472
D++ + +KN + S++ VD+++R + + F H V ++ +PV+D F+SG
Sbjct: 358 DILDISWSKNNRLLSAS-VDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDHFISG 415
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPV---AAYDPEGLIFAAGVNSESIKLYDL 625
S+D +R+W + CQ + R + Y P+G G + + Y++
Sbjct: 416 SIDGKVRIWS--ASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV 467
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 386 NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGL 529
+K + F GH+ ++ + S + LS S+D ++RLW + +C G+
Sbjct: 346 DKPLHEFLGHSGDILDISWSK-NNRLLSASVDNSVRLWQIGCEDCLGI 392
>At5g24320.1 68418.m02865 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 694
Score = 42.3 bits (95), Expect = 3e-04
Identities = 28/114 (24%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSG 472
D++ + +KN + S++ VD+++R + + F H V ++ +PV+D F+SG
Sbjct: 358 DILDISWSKNNRLLSAS-VDNSVRLWQIGCEDCLGIF-SHNNYVTSVQFNPVDDDHFISG 415
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPV---AAYDPEGLIFAAGVNSESIKLYDL 625
S+D +R+W + CQ + R + Y P+G G + + Y++
Sbjct: 416 SIDGKVRIWS--ASQCQVVDWADARGIVTAVCYQPDGQAVIIGTLTSDCRFYNV 467
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/48 (29%), Positives = 27/48 (56%)
Frame = +2
Query: 386 NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGL 529
+K + F GH+ ++ + S + LS S+D ++RLW + +C G+
Sbjct: 346 DKPLHEFLGHSGDILDISWSK-NNRLLSASVDNSVRLWQIGCEDCLGI 392
>At3g27640.1 68416.m03452 transducin family protein / WD-40 repeat
family protein contains seven WD-40 G-protein beta
repeats; similar to RA-regulated nuclear
matrix-associated protein (GI:14161320) {Homo sapiens}
Length = 535
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/53 (41%), Positives = 27/53 (50%), Gaps = 1/53 (1%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV-EDTFLSGSLDKTLRLWDLR 508
D TI+ + +NK GHT V +MC P D +SGS D LWDLR
Sbjct: 149 DQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWDLR 201
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)
Frame = +2
Query: 452 EDTFLSGSLDKTLRLWDLRSPNCQGLM--HL-SGRPVAAYDPEGLIFAAGVNSESIKLYD 622
+ L+ S D+T+++WD+ C G++ H + + + ++ + +G L+D
Sbjct: 140 DSCLLTASGDQTIKVWDVEENKCTGVLIGHTGTVKSMCSHPTNSDLLVSGSRDGCFALWD 199
Query: 623 LR 628
LR
Sbjct: 200 LR 201
>At2g22040.1 68415.m02617 transducin family protein / WD-40 repeat
family protein similar to Pop3 (GI:3434986)
[Schizosaccharomyces pombe]; contains Pfam PF00400: WD
domain, G-beta repeat (6 copies, 2 weak);
Length = 312
Score = 42.3 bits (95), Expect = 3e-04
Identities = 32/144 (22%), Positives = 57/144 (39%), Gaps = 1/144 (0%)
Frame = +2
Query: 203 LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLH 382
L + S D I ++ G + V+ + T K + + S +
Sbjct: 13 LATASHDQTIRLWQARTGRCYFSFRYPDLHVNRLELTPEKGKLVAACNPHIRLFDLRSYN 72
Query: 383 DNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQ-GLMHLSGRPVAA 559
+ +R F HTK V+ + SGS D ++++WDLR CQ +S
Sbjct: 73 PHIPVRNFVSHTKNVMAVGFQYTGHMMYSGSEDGSVKIWDLRVRECQREFRSVSPVNTVV 132
Query: 560 YDPEGLIFAAGVNSESIKLYDLRS 631
P +G + +I+++DLR+
Sbjct: 133 LHPNQTELISGDQNGNIRVWDLRA 156
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/129 (23%), Positives = 54/129 (41%), Gaps = 4/129 (3%)
Frame = +2
Query: 146 FRENTDKINSIDFSPN-GETLISCSEDDQIVIYDCEKGTQMITVN---SKKYGVDLIHFT 313
FR +N ++ +P G+ + +C+ I ++D I V S V + F
Sbjct: 36 FRYPDLHVNRLELTPEKGKLVAACNP--HIRLFDLRSYNPHIPVRNFVSHTKNVMAVGFQ 93
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
+ + S D +++ L + R F V T+ L P + +SG + +R
Sbjct: 94 YTGHMMYSGSE--DGSVKIWDLRVRECQREFRS-VSPVNTVVLHPNQTELISGDQNGNIR 150
Query: 494 LWDLRSPNC 520
+WDLR+ C
Sbjct: 151 VWDLRADLC 159
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/53 (28%), Positives = 25/53 (47%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
D T++ +L K + GH + V S + ++ S D T RLW +R+
Sbjct: 238 DKTVKIWNLDGFKLEKVLTGHERWVWDCDFSMDGEYLVTASSDTTARLWSMRA 290
>At5g51980.1 68418.m06451 WD-40 repeat family protein / zfwd2
protein (ZFWD2), putative 99.8% identical to zfwd2
protein (GI:12057166) [Arabidopsis thaliana]; contains 6
copies (2 weak) Pfam PF00400: WD domain, G-beta repeat;
contains Pfam PF00642: Zinc finger C-x8-C-x5-C-x3-H type
(and similar) domain
Length = 437
Score = 41.9 bits (94), Expect = 4e-04
Identities = 19/45 (42%), Positives = 25/45 (55%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG 544
GH K V + L D +GS D+TLR+WD S C G++ L G
Sbjct: 149 GHEKLVSGIALPSGSDKLYTGSKDETLRVWDCASGQCTGVLKLGG 193
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/37 (40%), Positives = 23/37 (62%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
GHT VVT+ + + SGS+DKT+++W L + C
Sbjct: 272 GHTLAVVTLYVGA--NRLYSGSMDKTIKVWSLDNLQC 306
Score = 33.1 bits (72), Expect = 0.20
Identities = 31/105 (29%), Positives = 48/105 (45%), Gaps = 7/105 (6%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW-DLRSPN 517
S +D TI+ SL + + I+ H+ V M L + LS SLD T+++W + N
Sbjct: 289 SGSMDKTIKVWSLDNLQCIQTLTDHSS--VVMSLICWDQFLLSCSLDNTVKIWAAIEGGN 346
Query: 518 CQ-GLMHLSGRPVAA----YDPEGL-IFAAGVNSESIKLYDLRSF 634
+ H V A +D E + N +++LYDL SF
Sbjct: 347 LEVTYTHKEEHGVLALCGVHDAEAKPVLLCACNDNTLRLYDLPSF 391
>At4g03020.1 68417.m00410 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to L. erythrorhizon LEC14B, GenBank accession
number Q40153
Length = 493
Score = 41.9 bits (94), Expect = 4e-04
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSST 346
I S+ FS +G +++ S DD I +YD E + + V+ + F I S +
Sbjct: 232 IFSVKFSTDGREVVAGSSDDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLILSGS 291
Query: 347 KVDDTI-----RYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR 508
DD + R + +K GH + V + F+S D+T++LWD+R
Sbjct: 292 --DDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDIR 348
Score = 38.7 bits (86), Expect = 0.004
Identities = 32/121 (26%), Positives = 53/121 (43%), Gaps = 7/121 (5%)
Frame = +2
Query: 287 YGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVE-DTF 463
+G+ + F+ + S+ DD+I L N+ HT V T+C + +
Sbjct: 230 FGIFSVKFSTDGREVVAGSS--DDSIYVYDLEANRVSLRTVAHTSDVNTVCFADESGNLI 287
Query: 464 LSGSLDKTLRLWDLRS----PNCQGLM--HLSGRPVAAYDPEGLIFAAGVNSESIKLYDL 625
LSGS D ++WD R G++ HL G +G F + ++IKL+D+
Sbjct: 288 LSGSDDNLCKVWDRRCFIGRDKPAGVLVGHLEGVTFIDSRGDGRYFISNGKDQTIKLWDI 347
Query: 626 R 628
R
Sbjct: 348 R 348
>At3g15470.1 68416.m01962 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 883
Score = 41.9 bits (94), Expect = 4e-04
Identities = 30/110 (27%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSG 472
D++ +K+ + SS+ +D T+R +L ++ F H+ V + +PV+D F+SG
Sbjct: 515 DVLDLAWSKSQHLLSSS-MDKTVRLWNLSSQTCLKVF-SHSDYVTCIQFNPVDDRYFISG 572
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPVAA-YDPEGLIFAAGVNSESIKLY 619
SLD +R+W + L +A Y P+G G S ++Y
Sbjct: 573 SLDAKVRVWSIPDRQVVDWYDLHEMVTSACYTPDGQGVLVGSYKGSCRMY 622
Score = 35.9 bits (79), Expect = 0.029
Identities = 17/39 (43%), Positives = 23/39 (58%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
F GH V+ + S + LS S+DKT+RLW+L S C
Sbjct: 509 FQGHVDDVLDLAWSKSQH-LLSSSMDKTVRLWNLSSQTC 546
>At1g53090.2 68414.m06012 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLI-SCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
+E+ ++ SID+S TL+ S S+D + ++ +G + T+ +K + + F
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETG 631
Query: 326 TAIHSSTKVDDTIRYLSLHDNKY-IRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
++ + D + Y L + K + GH K V+ T +S S D TL+LWD
Sbjct: 632 RSL-AFGSADHKVYYYDLRNPKLPLCTMIGH-HKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
Query: 503 L 505
L
Sbjct: 690 L 690
>At1g53090.1 68414.m06011 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400) (1 below
cutoff); similar to phytochrome A supressor spa1
(GI:4809171) [Arabidopsis thaliana]
Length = 794
Score = 41.9 bits (94), Expect = 4e-04
Identities = 32/121 (26%), Positives = 57/121 (47%), Gaps = 2/121 (1%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLI-SCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
+E+ ++ SID+S TL+ S S+D + ++ +G + T+ +K + + F
Sbjct: 573 KEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKA-NICCVQFPSETG 631
Query: 326 TAIHSSTKVDDTIRYLSLHDNKY-IRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
++ + D + Y L + K + GH K V+ T +S S D TL+LWD
Sbjct: 632 RSL-AFGSADHKVYYYDLRNPKLPLCTMIGH-HKTVSYVRFVDSSTLVSSSTDNTLKLWD 689
Query: 503 L 505
L
Sbjct: 690 L 690
>At5g50120.1 68418.m06207 transducin family protein / WD-40 repeat
family protein Similar to En/Spm-like transposon protein
(gi:2739374)[Arabidopsis thaliana]; similar to
GTP-binding regulatory protein and WD-repeat protein;
contains 7 WD-40 repeats
Length = 388
Score = 41.5 bits (93), Expect = 6e-04
Identities = 39/153 (25%), Positives = 67/153 (43%), Gaps = 14/153 (9%)
Frame = +2
Query: 128 FKVAKVFRE-NTDKINSIDFSPNGETLISCSEDDQIVIY----------DCEKGTQMITV 274
FK + F + D IN++ S NG+ + + S D +I ++ K + + +
Sbjct: 197 FKCLESFTNAHDDAINAVALSENGD-IYTGSSDQRIKVWRKNINEENVKKKRKHSLVAIL 255
Query: 275 NSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNK---YIRYFPGHTKKVVTMCLS 445
+ G++ + + + +HS D +I D + GHT+ V +CL+
Sbjct: 256 SEHNSGINALALSGTNGSLLHSGGS-DGSILVWERDDGGDIVVVGMLRGHTESV--LCLA 312
Query: 446 PVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG 544
V D SGS DKT+RLW + + L L G
Sbjct: 313 VVSDILCSGSADKTVRLWKCSAKDYSCLAMLEG 345
>At4g35140.1 68417.m04996 transducin family protein / WD-40 repeat
family protein contains 6 (3 significant) WD-40 repeats;
similar to PC326 protein (GI:200241) (PIR2:S37694)
[Mus musculus]; Human (H326) mRNA, Homo sapiens,
gb:U06631
Length = 496
Score = 41.5 bits (93), Expect = 6e-04
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 17/192 (8%)
Frame = +2
Query: 110 DQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNS-KK 286
+ +V ++ K ++ +N++ F+ G+ LIS S+D ++V++D + G ++ +S
Sbjct: 43 ENLVLRLEIYKKLEKHKGCVNTVSFNAEGDVLISGSDDRRVVLWDWQLGNVKLSFHSGHA 102
Query: 287 YGVDLIHFTHAKNTAIHSSTKVDDTIRYLS-LHDNKYIRYFPG-HTKKVVTMCLSPVE-D 457
V F + + D +R S L +K F G H + +C+ P
Sbjct: 103 NNVFQAKFMPFSDDRTIVTCAADGMVRRASILEGDKVETSFLGLHQGRAHKLCIEPGNPH 162
Query: 458 TFLSGSLDKTLRLWDLRSP------NCQGL------MHLSGRPVAAYDPEGL-IFAAGVN 598
F + D ++ +DLR+ C+ + M A DP +FA G
Sbjct: 163 IFYTCGEDGLVQRFDLRTEAPTELFTCRSVDPRRRNMDAIQLNAIAIDPRNSNLFAVGGM 222
Query: 599 SESIKLYDLRSF 634
E +LYD+R F
Sbjct: 223 EEYARLYDIRRF 234
>At1g18080.1 68414.m02238 WD-40 repeat family protein /
auxin-dependent protein (ARCA) / guanine
nucleotide-binding protein beta subunit, putative
identical to SP|O24456 Guanine nucleotide-binding
protein beta subunit-like protein (WD-40 repeat
auxin-dependent protein ARCA) {Arabidopsis thaliana};
contains 7 WD-40 repeats (PF00400)
Length = 327
Score = 41.5 bits (93), Expect = 6e-04
Identities = 31/123 (25%), Positives = 54/123 (43%), Gaps = 5/123 (4%)
Frame = +2
Query: 149 RENTDKINSIDFS-PNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH--- 316
R +TD + +I N + ++S S D I+++ K + V ++ HF
Sbjct: 12 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRL-TGHSHFVEDVV 70
Query: 317 -AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
+ + S D +R L R F GHTK V+++ S +S S D+T++
Sbjct: 71 LSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIK 130
Query: 494 LWD 502
LW+
Sbjct: 131 LWN 133
Score = 40.7 bits (91), Expect = 0.001
Identities = 42/167 (25%), Positives = 65/167 (38%), Gaps = 5/167 (2%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYG----VDLIHFT 313
F +T + S+ FS + ++S S D I +++ G T++ G V + F+
Sbjct: 101 FVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT-LGECKYTISEGGEGHRDWVSCVRFS 159
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
S D T++ +L + K GHT V T+ +SP SG D +
Sbjct: 160 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVL 219
Query: 494 LWDL-RSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
LWDL L S + P A IK++DL S
Sbjct: 220 LWDLAEGKKLYSLEANSVIHALCFSPNRYWLCA-ATEHGIKIWDLES 265
Score = 30.3 bits (65), Expect = 1.4
Identities = 17/36 (47%), Positives = 19/36 (52%)
Frame = +2
Query: 398 RYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
R GH+ V + LS LSGS D LRLWDL
Sbjct: 57 RRLTGHSHFVEDVVLSSDGQFALSGSWDGELRLWDL 92
>At1g10580.1 68414.m01192 transducin family protein / WD-40 repeat
family protein similar to splicing factor hPRP17
(gi|3283220); contains 7 WD-40 repeats (PF00400);similar
to ESTs emb|F15435 and dbj|AUO62661
Length = 573
Score = 41.5 bits (93), Expect = 6e-04
Identities = 40/176 (22%), Positives = 69/176 (39%), Gaps = 5/176 (2%)
Frame = +2
Query: 116 VVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKK--Y 289
V S K + + + + I FS +G ++ D I +D E G + T ++ K Y
Sbjct: 312 VYNSGKCMRTYMGHAKAVRDICFSNDGSKFLTAGYDKNIKYWDTETGQVISTFSTGKIPY 371
Query: 290 GVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLS 469
V L +N + + D I ++ + + + H V T+ F++
Sbjct: 372 VVKLNPDDDKQNILLAGMS--DKKIVQWDINTGEVTQEYDQHLGAVNTITFVDNNRRFVT 429
Query: 470 GSLDKTLRLWDLRSPNCQGLM---HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLR 628
S DK+LR+W+ P + H+ P + P G AA I +Y R
Sbjct: 430 SSDDKSLRVWEFGIPVVIKYISEPHMHSMPSISVHPNGNWLAAQSLDNQILIYSTR 485
Score = 36.3 bits (80), Expect = 0.022
Identities = 29/119 (24%), Positives = 52/119 (43%), Gaps = 5/119 (4%)
Frame = +2
Query: 290 GVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDN-KYIRYFPGHTKKVVTMCLSPVEDTFL 466
GV I F K + S +D ++ ++++ K +R + GH K V +C S FL
Sbjct: 284 GVSAIRF-FPKQGHLLLSAGMDCKVKIWDVYNSGKCMRTYMGHAKAVRDICFSNDGSKFL 342
Query: 467 SGSLDKTLRLWDLRSPNCQGLMHLSGRP-VAAYDPEG---LIFAAGVNSESIKLYDLRS 631
+ DK ++ WD + P V +P+ I AG++ + I +D+ +
Sbjct: 343 TAGYDKNIKYWDTETGQVISTFSTGKIPYVVKLNPDDDKQNILLAGMSDKKIVQWDINT 401
>At5g54200.1 68418.m06748 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 825
Score = 41.1 bits (92), Expect = 8e-04
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 2/95 (2%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSG 472
D++ + +K+ + SS+ +D T+R L ++ F H+ V + +PV+D F+SG
Sbjct: 470 DVLDLSWSKSQHLLSSS-MDKTVRLWDLSSKTCLKVF-SHSDYVTCIQFNPVDDNYFISG 527
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPVAA-YDPEG 574
SLD +R+W + L AA Y P+G
Sbjct: 528 SLDAKVRIWSIPDHQVVDWNDLHEMVTAACYTPDG 562
Score = 36.7 bits (81), Expect = 0.016
Identities = 18/39 (46%), Positives = 23/39 (58%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
F GH V+ + S + LS S+DKT+RLWDL S C
Sbjct: 464 FVGHLDDVLDLSWSKSQH-LLSSSMDKTVRLWDLSSKTC 501
>At5g08560.1 68418.m01018 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 589
Score = 41.1 bits (92), Expect = 8e-04
Identities = 23/79 (29%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG-RPVA-AYDPEGLIF 583
GH K V+ + SP + L+ ++ +R WD+ S +C + G P++ + P+G
Sbjct: 317 GHHKPVIAILWSPDDRQVLTCGAEEVIRRWDVDSGDCVHMYEKGGISPISCGWYPDGQGI 376
Query: 584 AAGVNSESIKLYDLRSFDK 640
AG+ SI ++DL +K
Sbjct: 377 IAGMTDRSICMWDLDGREK 395
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/38 (31%), Positives = 24/38 (63%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYD 244
+ A++ +TD++ + FS NG+ L S S+D +I++
Sbjct: 265 QTAQILESHTDEVWFLQFSHNGKYLASSSKDQTAIIWE 302
>At2g32950.1 68415.m04039 COP1 regulatory protein photomorphogenesis
repressor; identical to COP1 regulatory protein/FUSCA
protein FUS1 GI:402685 SP:P43254
Length = 675
Score = 41.1 bits (92), Expect = 8e-04
Identities = 31/123 (25%), Positives = 59/123 (47%), Gaps = 2/123 (1%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAK 322
+ E+ + S+DFS + L+S S+D ++ ++ + +I ++ K + + +
Sbjct: 459 YEEHEKRAWSVDFSRTEPSMLVSGSDDCKVKVWCTRQEASVINIDMKA-NICCVKYNPGS 517
Query: 323 NTAIHSSTKVDDTIRYLSLHD-NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ I + D I Y L + ++ + F GH KK V+ + S S D TLRLW
Sbjct: 518 SNYIAVGS-ADHHIHYYDLRNISQPLHVFSGH-KKAVSYVKFLSNNELASASTDSTLRLW 575
Query: 500 DLR 508
D++
Sbjct: 576 DVK 578
Score = 33.1 bits (72), Expect = 0.20
Identities = 25/85 (29%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Frame = +2
Query: 176 IDFSPNGETLISC-SEDDQIVIYDCEKGTQMITVNS-KKYGVDLIHFTHAKNTAIHSSTK 349
+ ++P I+ S D I YD +Q + V S K V + F A S
Sbjct: 511 VKYNPGSSNYIAVGSADHHIHYYDLRNISQPLHVFSGHKKAVSYVKFLSNNELA---SAS 567
Query: 350 VDDTIRYLSLHDNKYIRYFPGHTKK 424
D T+R + DN +R F GHT +
Sbjct: 568 TDSTLRLWDVKDNLPVRTFRGHTNE 592
>At1g64610.2 68414.m07324 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDL 505
S+ VD+T+R + ++ +R F H V + +PV+D F+SGS+D +R+WD+
Sbjct: 338 SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC-QGLMHLSGRPVAAYD 565
K + F GH +++ + S + LS S+D+T+RLW + C + H + A++
Sbjct: 313 KPLHEFKGHIGEILDLSWSE-KGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFN 371
Query: 566 P-EGLIFAAGVNSESIKLYDL 625
P + F +G ++++D+
Sbjct: 372 PVDDNYFISGSIDGKVRIWDV 392
>At1g64610.1 68414.m07323 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 647
Score = 41.1 bits (92), Expect = 8e-04
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDL 505
S+ VD+T+R + ++ +R F H V + +PV+D F+SGS+D +R+WD+
Sbjct: 338 SSSVDETVRLWRVGCDECLRTFT-HNNFVTCVAFNPVDDNYFISGSIDGKVRIWDV 392
Score = 31.5 bits (68), Expect = 0.62
Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC-QGLMHLSGRPVAAYD 565
K + F GH +++ + S + LS S+D+T+RLW + C + H + A++
Sbjct: 313 KPLHEFKGHIGEILDLSWSE-KGYLLSSSVDETVRLWRVGCDECLRTFTHNNFVTCVAFN 371
Query: 566 P-EGLIFAAGVNSESIKLYDL 625
P + F +G ++++D+
Sbjct: 372 PVDDNYFISGSIDGKVRIWDV 392
>At5g02430.1 68418.m00167 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); rab11 binding protein, Bos
taurus, EMBL:AF117897
Length = 905
Score = 40.3 bits (90), Expect = 0.001
Identities = 28/110 (25%), Positives = 53/110 (48%), Gaps = 2/110 (1%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV-EDTFLSG 472
D++ + +++ + SS+ +D T+R + ++ F H V + +P+ ED F+SG
Sbjct: 521 DVLDLSWSRSQLLLSSS-MDKTVRLWDIETQSCLKLF-AHNDYVTCVQFNPLDEDYFISG 578
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPVA-AYDPEGLIFAAGVNSESIKLY 619
SLD +R+W++ + L A Y P+G G + +LY
Sbjct: 579 SLDAKIRIWNISNRQVVEWNDLKEMVTAVCYTPDGQAAFVGSINGHCRLY 628
Score = 36.7 bits (81), Expect = 0.016
Identities = 21/49 (42%), Positives = 29/49 (59%)
Frame = +2
Query: 374 SLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
SL D K I F GH V+ + S + LS S+DKT+RLWD+ + +C
Sbjct: 506 SLSD-KPICSFTGHLDDVLDLSWSRSQ-LLLSSSMDKTVRLWDIETQSC 552
>At4g25440.1 68417.m03663 WD-40 repeat family protein / zfwd1
protein (ZFWD1) identical to zfwd1 protein (GI:12057164)
[Arabidopsis thaliana]
Length = 430
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG 544
GH K V + L D + S D+T+R+WD S C G+++L G
Sbjct: 142 GHQKVVTGIALPSGSDKLYTASKDETVRIWDCASGQCTGVLNLGG 186
Score = 31.1 bits (67), Expect = 0.82
Identities = 32/105 (30%), Positives = 47/105 (44%), Gaps = 7/105 (6%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW-DLRSPN 517
S +D++I+ SL + + I+ HT V M L + LS SLD T+++W N
Sbjct: 282 SGAMDNSIKVWSLDNLQCIQTLTEHTS--VVMSLICWDQFLLSCSLDNTVKIWAATEGGN 339
Query: 518 CQ-GLMHLSGRPVAA----YDPEGL-IFAAGVNSESIKLYDLRSF 634
+ H V A +D E + N S+ LYDL SF
Sbjct: 340 LEVTYTHKEEYGVLALCGVHDAEAKPVLLCSCNDNSLHLYDLPSF 384
>At1g69400.2 68414.m07968 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 272
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/160 (21%), Positives = 66/160 (41%)
Frame = +2
Query: 161 DKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
D ++ + FSP L+ S D + +YD E + + +NS+ +D +N +
Sbjct: 14 DAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF----ENESTSF 69
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
++ D IR L+ + H ++ S + +S D+ ++ WD R
Sbjct: 70 TSGSDGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRES 128
Query: 521 QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
+G V G V++ S+ +YDLR+ D+
Sbjct: 129 LVFSTDAGGAVGCVTVSGNNLVVCVDA-SMHIYDLRNLDE 167
>At1g69400.1 68414.m07969 transducin family protein / WD-40 repeat
family protein similar to mitotic checkpoint protein
(GI:9294423) {Arabidopsis thaliana}; similar to mitotic
checkpoint protein (BUB3) (SP:O43684) (Homo sapiens)
Length = 314
Score = 40.3 bits (90), Expect = 0.001
Identities = 35/160 (21%), Positives = 66/160 (41%)
Frame = +2
Query: 161 DKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
D ++ + FSP L+ S D + +YD E + + +NS+ +D +N +
Sbjct: 14 DAVSRLRFSPQSNNLLVASWDSYLRLYDVESSSLSLELNSQAALLDCCF----ENESTSF 69
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
++ D IR L+ + H ++ S + +S D+ ++ WD R
Sbjct: 70 TSGSDGFIRRYDLNAGT-VDTIGRHDDISTSIVYSYEKGEVISTGFDEKIKFWDTRQRES 128
Query: 521 QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
+G V G V++ S+ +YDLR+ D+
Sbjct: 129 LVFSTDAGGAVGCVTVSGNNLVVCVDA-SMHIYDLRNLDE 167
>At1g15440.2 68414.m01856 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 860
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Frame = +2
Query: 164 KINSIDFSPNGETL-ISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
K+ + F+ G L C++ Q++++D T ++ + V+ + T++ ++ + +
Sbjct: 308 KLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCV--TYSPDSQLLA 365
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL-RSPN 517
+ D+ ++ ++ F HT V + + LS SLD T+R WD R N
Sbjct: 366 TGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKN 425
Query: 518 CQGLMHLSGRPVAAY--DPEGLIFAAG 592
+ + R + DP G + AG
Sbjct: 426 YKTYTTPTPRQFVSLTADPSGDVVCAG 452
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 4/163 (2%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE--KGTQMITVNSKKYGVDLIHFTHA 319
F E+T+ + ++ F + +L+S S D + +D + K + T + + V L
Sbjct: 387 FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT--ADP 444
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ + T I S + GH V + SP+ S S D T+RLW
Sbjct: 445 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 504
Query: 500 DL--RSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYD 622
D+ + H A+ P+G A+ I +D
Sbjct: 505 DVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 547
>At1g15440.1 68414.m01855 transducin family protein / WD-40 repeat
family protein Strong similarity to gb X95263 Periodic
tryptophan protein 2 gene (PWP2) from Homo sapiens and
contains 6 WD40, G-beta repeat domains
Length = 900
Score = 40.3 bits (90), Expect = 0.001
Identities = 32/147 (21%), Positives = 65/147 (44%), Gaps = 4/147 (2%)
Frame = +2
Query: 164 KINSIDFSPNGETL-ISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHS 340
K+ + F+ G L C++ Q++++D T ++ + V+ + T++ ++ + +
Sbjct: 348 KLTTAVFNERGNWLTFGCAKLGQLLVWDWRTETYILKQQGHYFDVNCV--TYSPDSQLLA 405
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL-RSPN 517
+ D+ ++ ++ F HT V + + LS SLD T+R WD R N
Sbjct: 406 TGADDNKVKVWNVMSGTCFITFTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKN 465
Query: 518 CQGLMHLSGRPVAAY--DPEGLIFAAG 592
+ + R + DP G + AG
Sbjct: 466 YKTYTTPTPRQFVSLTADPSGDVVCAG 492
Score = 38.7 bits (86), Expect = 0.004
Identities = 36/163 (22%), Positives = 62/163 (38%), Gaps = 4/163 (2%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE--KGTQMITVNSKKYGVDLIHFTHA 319
F E+T+ + ++ F + +L+S S D + +D + K + T + + V L
Sbjct: 427 FTEHTNAVTALHFMADNHSLLSASLDGTVRAWDFKRYKNYKTYTTPTPRQFVSLT--ADP 484
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
+ + T I S + GH V + SP+ S S D T+RLW
Sbjct: 485 SGDVVCAGTLDSFEIFVWSKKTGQIKDILSGHEAPVHGLMFSPLTQLLASSSWDYTVRLW 544
Query: 500 DL--RSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYD 622
D+ + H A+ P+G A+ I +D
Sbjct: 545 DVFASKGTVETFRHNHDVLTVAFRPDGKQLASSTLDGQINFWD 587
>At2g05720.1 68415.m00613 transducin family protein / WD-40 repeat
family protein Similar to U4/U6 small nuclear
ribonucleoprotein hPrp4 (gi:2708305)[Homo sapiens];
contains 4 WD-40 repeats
Length = 276
Score = 39.9 bits (89), Expect = 0.002
Identities = 27/102 (26%), Positives = 47/102 (46%), Gaps = 3/102 (2%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPN 517
+S+ D R L + I F GH K+V+++ SP SG D R+WDLR
Sbjct: 146 ASSGFDSLARVWDLRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRK 205
Query: 518 CQGLM--HLSGRPVAAYDPEGLIFAAGVNSE-SIKLYDLRSF 634
++ H++ Y+P+ F A + + ++ ++ R F
Sbjct: 206 LLYIIPAHVNLVSQVKYEPQERYFLATASHDMNVNIWSGRDF 247
Score = 37.9 bits (84), Expect = 0.007
Identities = 24/106 (22%), Positives = 50/106 (47%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVD 298
+R+ + +F+ + ++ S+DFSPNG L S ED+Q I+D + + + V
Sbjct: 159 LRTARNILIFQGHIKQVLSVDFSPNGYHLASGGEDNQCRIWDLRMRKLLYIIPAHVNLVS 218
Query: 299 LIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTM 436
+ + + + +++ D + S D ++ GH KV ++
Sbjct: 219 QVKYEPQERYFLATASH-DMNVNIWSGRDFSLVKSLVGHESKVASL 263
>At5g43930.1 68418.m05374 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to WD-repeat protein 5 (SP:Q9UGP9) [Homo
sapiens]
Length = 726
Score = 39.5 bits (88), Expect = 0.002
Identities = 31/112 (27%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLWDLRSP 514
+ST D T++ + ++ GH + + P + SGSLD +RLW+ +
Sbjct: 122 ASTHGDHTVKIIDCETGNCLKVLTGHRRTPWVVRFHPHHSEIVASGSLDLEVRLWNTTTS 181
Query: 515 NCQGLMHLSGRPVA--AYDPEG-LIFAAGVNSESIKLYDLRSFDKGPFVTFK 661
C HL RP+A A+ EG L+ A + + Y+ R P V K
Sbjct: 182 ECI-RSHLFYRPIASIAFHAEGELLAVASGHKLHMWHYNRRGEGSSPTVVLK 232
>At5g42010.1 68418.m05114 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 709
Score = 39.5 bits (88), Expect = 0.002
Identities = 21/57 (36%), Positives = 35/57 (61%), Gaps = 2/57 (3%)
Frame = +2
Query: 341 STKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDT-FLSGSLDKTLRLWDL 505
S+ VD+T+R + ++ IR F H V + +PV+D F+SGS+D +R+WD+
Sbjct: 379 SSSVDETVRLWRVGSSDECIRVF-SHKSFVTCVAFNPVDDNYFISGSIDGKVRIWDV 434
Score = 33.9 bits (74), Expect = 0.12
Identities = 23/80 (28%), Positives = 42/80 (52%), Gaps = 3/80 (3%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL-RSPNC-QGLMHLSGRPVAAYDP-EG 574
F GHT +++ + S + LS S+D+T+RLW + S C + H S A++P +
Sbjct: 359 FRGHTGEILDLSWSE-KGFLLSSSVDETVRLWRVGSSDECIRVFSHKSFVTCVAFNPVDD 417
Query: 575 LIFAAGVNSESIKLYDLRSF 634
F +G ++++D+ F
Sbjct: 418 NYFISGSIDGKVRIWDVSQF 437
>At5g18525.1 68418.m02190 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 580
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/48 (41%), Positives = 27/48 (56%)
Frame = +2
Query: 365 RYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR 508
R L +N +I + H VT ++P +S SLDKTLR+WDLR
Sbjct: 437 RLFDLRENGFISSWRAHDG-YVTKLVAPESHLLVSSSLDKTLRIWDLR 483
>At5g52820.1 68418.m06556 WD-40 repeat family protein / notchless
protein, putative similar to notchless [Xenopus laevis]
GI:3687833; contains Pfam PF00400: WD domain, G-beta
repeat (8 copies)
Length = 473
Score = 39.1 bits (87), Expect = 0.003
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 2/96 (2%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPN 517
+S D ++R + +++ F GH V + S LSGS D TL++W++R+
Sbjct: 376 ASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLLLSGSKDSTLKIWEIRTKK 435
Query: 518 CQGLMHLSGRPVAAYD--PEGLIFAAGVNSESIKLY 619
+ + V A D P+G +G +KL+
Sbjct: 436 LKQDLPGHADEVFAVDWSPDGEKVVSGGKDRVLKLW 471
Score = 38.3 bits (85), Expect = 0.005
Identities = 26/79 (32%), Positives = 38/79 (48%), Gaps = 4/79 (5%)
Frame = +2
Query: 386 NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL--RSP--NCQGLMHLSGRPV 553
N+ + GH + V+ + SP SGS D T+RLWDL +P C+G H +
Sbjct: 99 NRCSQTIAGHAEAVLCVSFSPDGKQLASGSGDTTVRLWDLYTETPLFTCKG--HKNWVLT 156
Query: 554 AAYDPEGLIFAAGVNSESI 610
A+ P+G +G S I
Sbjct: 157 VAWSPDGKHLVSGSKSGEI 175
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/117 (26%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Frame = +2
Query: 173 SIDFSPNGETLISCSEDDQIVIYDCEKG--TQMITVNSKKY--GV--DLIHFTHAKNTAI 334
++ +SP+G+ L+S S+ +I ++ +KG KK+ G+ + +H + +
Sbjct: 156 TVAWSPDGKHLVSGSKSGEICCWNPKKGELEGSPLTGHKKWITGISWEPVHLSSPCRRFV 215
Query: 335 HSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLWD 502
SS D I ++L K I GHT V C+ D + +GS D T+++W+
Sbjct: 216 TSSKDGDARIWDITL--KKSIICLSGHTLAVT--CVKWGGDGIIYTGSQDCTIKMWE 268
Score = 27.9 bits (59), Expect = 7.6
Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPV--AAYDPEGLIF 583
GH + V + SP S S DK++RLW+ + + PV ++ + +
Sbjct: 358 GHQQLVNHVYFSPDGKWIASASFDKSVRLWNGITGQFVTVFRGHVGPVYQVSWSADSRLL 417
Query: 584 AAGVNSESIKLYDLRS 631
+G ++K++++R+
Sbjct: 418 LSGSKDSTLKIWEIRT 433
>At2g46290.1 68415.m05758 eukaryotic translation initiation factor 3
subunit 2, putative / eIF-3 beta, putative / eIF3i,
putative strong similarity to SP|Q38884 Eukaryotic
translation initiation factor 3 subunit 2 (eIF-3 beta)
(eIF3 p36) (eIF3i) (TGF-beta receptor interacting
protein 1) (TRIP-1) {Arabidopsis thaliana}; contains
Pfam PF00400: WD domain, G-beta repeat (5
copies)|19799885|gb|AU231175.1|AU231175
Length = 355
Score = 39.1 bits (87), Expect = 0.003
Identities = 14/34 (41%), Positives = 24/34 (70%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
GH + + ++C + + FL+GS DKT +LWD+R+
Sbjct: 218 GHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRT 251
Score = 34.7 bits (76), Expect = 0.066
Identities = 39/179 (21%), Positives = 71/179 (39%), Gaps = 17/179 (9%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMIT------VNSKKYGVD--- 298
+R ++ + D S + LI+ S D ++D + G ++ T S + V
Sbjct: 75 YRGHSGAVWCCDISRDSSRLITGSADQTAKLWDVKSGKELFTFKFGAPARSVDFSVGDHL 134
Query: 299 -LIHFTHAKNT--AIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLS 469
+I H T AIH +D + D+ + P KK+ P+ T +S
Sbjct: 135 AVITTDHFVGTSSAIHVKRIAEDPEDQVG--DSVLVLQSPDGKKKINRAVWGPLNQTIVS 192
Query: 470 GSLDKTLRLWD-----LRSPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
G D +R+WD L + + + H + F G + ++ KL+D+R+
Sbjct: 193 GGEDAAIRIWDAETGKLLKQSDEEVGHKEAITSLCKAADDSHFLTGSHDKTAKLWDMRT 251
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/85 (23%), Positives = 38/85 (44%)
Frame = +2
Query: 257 TQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTM 436
T+M + K + L + +N + S D T + + + + GH+ V
Sbjct: 26 TRMRPILMKGHERPLTFLRYNRNGDLLFSCAKDHTPTVWFADNGERLGTYRGHSGAVWCC 85
Query: 437 CLSPVEDTFLSGSLDKTLRLWDLRS 511
+S ++GS D+T +LWD++S
Sbjct: 86 DISRDSSRLITGSADQTAKLWDVKS 110
>At1g15470.1 68414.m01860 transducin family protein / WD-40 repeat
family protein Strong similarity to gb AF096285
serine-threonine kinase receptor-associated protein from
Mus musculus and contains 5 PF|00400 WD40, G-beta repeat
domains. EST gb|F14050 comes from this gene
Length = 333
Score = 38.7 bits (86), Expect = 0.004
Identities = 42/155 (27%), Positives = 68/155 (43%), Gaps = 6/155 (3%)
Frame = +2
Query: 185 SPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTI 364
+P+G LIS S+D ++ + E G + T K V KN +S D T
Sbjct: 23 TPDGFFLISASKDSNPMLRNGETGDWIGTFEGHKGAVWSCSLD--KNAIRAASASADFTA 80
Query: 365 RYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDT--FLSGSLDKTLRLWDLRSPNCQ----G 526
+ + + F K +V C EDT L+G ++K LR++DL P+ G
Sbjct: 81 KIWNALTGDELHSF--EHKHIVRACAFS-EDTHRLLTGGMEKILRIFDLNRPDAPPKEVG 137
Query: 527 LMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRS 631
S R V + I ++ ++ I+L+D+RS
Sbjct: 138 NSPGSIRTVEWLHSDNTILSSCTDTGDIRLWDIRS 172
Score = 29.1 bits (62), Expect = 3.3
Identities = 16/45 (35%), Positives = 25/45 (55%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSG 544
GH V + +P +++ SGS D T+R+W + S N +LSG
Sbjct: 263 GHHGPVHCVRYAPGGESYTSGSEDGTVRIWVVGSVNHPEESNLSG 307
>At2g46340.1 68415.m05768 phytochrome A supressor spa1 (SPA1)
identical to phytochrome A supressor spa1 (GI:4809171)
[Arabidopsis thaliana]; contains 8 WD-40 repeats (Pfam
PF00400) (1 weak)
Length = 1029
Score = 37.9 bits (84), Expect = 0.007
Identities = 34/133 (25%), Positives = 62/133 (46%), Gaps = 5/133 (3%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAK 322
+ E+ + S+DFSP+ T +S S+D + ++ + + T+ S V + F+
Sbjct: 804 YTEHQKRAWSVDFSPSDPTKFVSGSDDCSVKLWSINEKRSLGTIWSPA-NVCCVQFSSYS 862
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIR----YFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
N + + D Y +D +Y++ GH +K V+ +T +S S D +L
Sbjct: 863 NHLLAFGSA--DYKVY--CYDLRYVKTPWCTLAGH-EKAVSYVKFMDSETIVSASTDNSL 917
Query: 491 RLWDLRSPNCQGL 529
+LW+L N GL
Sbjct: 918 KLWNLNKTNSSGL 930
>At5g53500.1 68418.m06649 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]
Length = 654
Score = 37.5 bits (83), Expect = 0.009
Identities = 18/42 (42%), Positives = 28/42 (66%)
Frame = +2
Query: 404 FPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGL 529
F GHT +V+ + S ++ LS S+DKT+RLW + S +C G+
Sbjct: 324 FRGHTGEVLDISWSK-DNYLLSASMDKTVRLWKVGSNDCLGV 364
Score = 35.9 bits (79), Expect = 0.029
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV-EDTFLSGSLDKTLRLWDL 505
S +D T+R + N + F H V ++ +PV E+ F+SGS+D +R+W++
Sbjct: 344 SASMDKTVRLWKVGSNDCLGVF-AHNSYVTSVQFNPVNENYFMSGSIDGKVRIWNI 398
>At5g13840.1 68418.m01618 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to Fzr1
(GI:6463679){Homo sapiens}
Length = 481
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/123 (24%), Positives = 57/123 (46%), Gaps = 5/123 (4%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISC---SEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAK 322
E+T + +I +SP+ +L++ + D I ++ G Q+ NS G + + +K
Sbjct: 338 EHTAAVKAITWSPHQSSLLASGGGTADRCIRFWNTTNGNQL---NSIDTGSQVCNLAWSK 394
Query: 323 NTAIHSSTK--VDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
N ST + I + GH+ +V+ + SP T ++G+ D+TLR
Sbjct: 395 NVNEIVSTHGYSQNQIMLWKYPSMSKVATLTGHSMRVLYLATSPDGQTIVTGAGDETLRF 454
Query: 497 WDL 505
W++
Sbjct: 455 WNV 457
>At1g04140.2 68414.m00404 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 793
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLWDLRSP 514
+ST D T++ + K ++ GH + + P + SGSLD +RLW+ ++
Sbjct: 119 ASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTG 178
Query: 515 NCQGLMHLSGRPVA--AYDPEG-LIFAAGVNSESIKLYDLRSFDKGPFVTFK 661
C H RP+A A+ G L+ A + I Y+ D P + K
Sbjct: 179 ECI-RTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLK 229
>At1g04140.1 68414.m00403 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to neural cell adhesion molecule 2, large
isoform precursor gb|M76710 from Xenopus laevis, and
beta transducin from S. cerevisiae gb|Q05946. ESTs
gb|N65081 gb|Z30910, gb|Z34190, gb|Z34611, gb|R30101,
gb|H36304, and gb|N65606 come from
Length = 790
Score = 37.5 bits (83), Expect = 0.009
Identities = 30/112 (26%), Positives = 49/112 (43%), Gaps = 4/112 (3%)
Frame = +2
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLWDLRSP 514
+ST D T++ + K ++ GH + + P + SGSLD +RLW+ ++
Sbjct: 119 ASTHGDHTVKIIDCETGKCLKILTGHRRTPWVVRFHPRHSEIVASGSLDHEVRLWNAKTG 178
Query: 515 NCQGLMHLSGRPVA--AYDPEG-LIFAAGVNSESIKLYDLRSFDKGPFVTFK 661
C H RP+A A+ G L+ A + I Y+ D P + K
Sbjct: 179 ECI-RTHDFYRPIASIAFHAGGELLAVASGHKLHIWHYNKGGDDSAPAIVLK 229
>At5g40880.1 68418.m04964 WD-40 repeat family protein / zfwd3
protein (ZFWD3) contains 5 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd3 protein (GP:12057168)
{Arabidopsis thaliana}
Length = 472
Score = 37.1 bits (82), Expect = 0.012
Identities = 17/45 (37%), Positives = 25/45 (55%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQ 523
KY+ GH VT C + SGS+DKT+++WDL + C+
Sbjct: 302 KYLTSLEGHHSGEVT-CFVVGGEVLYSGSVDKTIKVWDLNTLQCR 345
>At4g05410.1 68417.m00823 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400); U3
snoRNP-associated 55-kDa protein, Homo sapiens,
gb:NP_004695; Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) [Podospora anserina]
Length = 504
Score = 37.1 bits (82), Expect = 0.012
Identities = 14/52 (26%), Positives = 27/52 (51%)
Frame = +2
Query: 350 VDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
VD + + ++++ FPGH V +C SGS D+T+++W++
Sbjct: 242 VDRHVHIWDVRTREHVQAFPGHRNTVSCLCFRYGTSELYSGSFDRTVKVWNV 293
>At1g80670.1 68414.m09466 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400) (1
weak); similar to Hypothetical RAE1-like
protein.(SP:Q38942) [Arabidopsis thaliana]; similar to
mRNA-associated protein mrnp 41 ((mRNA export protein)
(GB:AAC28126) (GI:1903456)(RAE1) (MRNP41) (SP:P78406)
[Homo sapiens]
Length = 349
Score = 37.1 bits (82), Expect = 0.012
Identities = 30/123 (24%), Positives = 48/123 (39%), Gaps = 4/123 (3%)
Frame = +2
Query: 161 DKINSIDFSPNGETLISCSEDDQIVIYDCEK-GTQMITVNSKKYGVD---LIHFTHAKNT 328
D I+S+ FSP + L++ S D+Q+ ++ + G + + D L T
Sbjct: 26 DSISSLSFSPRADILVATSWDNQVRCWEISRSGASLASAPKASISHDQPVLCSAWKDDGT 85
Query: 329 AIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR 508
+ S D + L H + M P + +GS DKTL+ WD R
Sbjct: 86 TVFSGG-CDKQAKMWPLLSGGQPVTVAMHEGPIAAMAWIPGMNLLATGSWDKTLKYWDTR 144
Query: 509 SPN 517
N
Sbjct: 145 QQN 147
>At1g36070.1 68414.m04484 WD-40 repeat family protein contains 2
WD-40 repeats (PF0400);similar to guanine
nucleotide-binding protein beta subunit GPBA (SP:P36408)
[Dictyostelium discoideum (Slime mold)]; similar to
katanin p80 (WD40-containing) subunit B 1 (GI:12655011)
[Homo sapiens]
Length = 418
Score = 37.1 bits (82), Expect = 0.012
Identities = 45/192 (23%), Positives = 82/192 (42%), Gaps = 13/192 (6%)
Frame = +2
Query: 95 MMKLVDQVVRSFKVAKVFRENTDKINSIDF--SPNGET-LISCSEDDQIVIYDCEKGTQM 265
+ K V+Q +F ++ E+ N++D P+G LI+ + D +I ++D + T++
Sbjct: 184 LCKCVNQPGVAF-CTRLSTEDNAITNTVDIYRDPSGSLRLITANNDCKIRVFDAQSFTRV 242
Query: 266 ITVNSKKYGVDLIHFTHAKNTAIHSSTKV-----DDTIRYLS-LHDNKYIRYFPGHTKKV 427
++ +D NT++ K+ D T +S H K I GH
Sbjct: 243 -----SEFALDW----SVNNTSVSPDGKLLAVVGDSTECLISDSHSGKVISSLRGHKDYS 293
Query: 428 VTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVA----AYDPEGLIFAAGV 595
P +G+ D RLWD+R+P+ + L G A + PEG A
Sbjct: 294 FASAWHPNGLILATGNQDTACRLWDIRNPS-ESFAVLKGNMGAIRGLKFTPEGRFLAMAE 352
Query: 596 NSESIKLYDLRS 631
++ + ++D +S
Sbjct: 353 PADFVHIFDTQS 364
Score = 28.3 bits (60), Expect = 5.8
Identities = 22/91 (24%), Positives = 35/91 (38%), Gaps = 3/91 (3%)
Frame = +2
Query: 143 VFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG---TQMITVNSKKYGVDLIHFT 313
V + N I + F+P G L D + I+D + G +Q I + + G+ T
Sbjct: 328 VLKGNMGAIRGLKFTPEGRFLAMAEPADFVHIFDTQSGFLQSQEIDLFGEIAGISFSPDT 387
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYF 406
A + T + Y DN Y+ F
Sbjct: 388 EALYVGVADRT-YGSLLEYKRRKDNHYMDSF 417
>At5g49200.1 68418.m06089 WD-40 repeat family protein / zfwd4
protein (ZFWD4) contains 6 WD-40 repeats (PF00400);
contains Zinc finger C-x8-C-x5-C-x3-H type domain
(PF00642); identical to zfwd4 protein (GI:12057170)
[Arabidopsis thaliana]
Length = 419
Score = 36.7 bits (81), Expect = 0.016
Identities = 16/44 (36%), Positives = 25/44 (56%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
KY+ GH+ +V C + SGS+DKT+++WDL + C
Sbjct: 249 KYLTSLEGHSGEVT--CFAVGGQMLYSGSVDKTIKMWDLNTLQC 290
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/37 (40%), Positives = 20/37 (54%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
GH K++ + L D S S+D TLR+WD S C
Sbjct: 129 GHNKELKGIALPEGSDKLFSVSIDGTLRVWDCNSGQC 165
>At5g13480.1 68418.m01554 WD-40 repeat family protein similar to
WD-repeat protein WDC146 (SP:Q9C0J8|) {Homo sapiens};
contains 3 weak Pfam PF00400: WD domain, G-beta repeats;
Length = 711
Score = 36.7 bits (81), Expect = 0.016
Identities = 24/114 (21%), Positives = 43/114 (37%)
Frame = +2
Query: 173 SIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKV 352
S+ ++ NG L++ S+D I +YD ++ + V + + S +
Sbjct: 315 SVKWNQNGNWLLTASKDQIIKLYDIRTMKELQSFRGHTKDVTSLAWHPCHEEYFVSGSSD 374
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSP 514
++ H+N I H V + P+ SGS D T + W P
Sbjct: 375 GSICHWIVGHENPQIEIPNAHDNSVWDLAWHPIGYLLCSGSNDHTTKFWCRNRP 428
Score = 32.7 bits (71), Expect = 0.27
Identities = 21/76 (27%), Positives = 34/76 (44%), Gaps = 2/76 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPN--CQGLMHLSGRPVAAYDPEGLIF 583
GH V ++ P + +SG D+ ++LWD RS C H + ++ G
Sbjct: 266 GHGWDVKSVDWHPTKSLLVSGGKDQLVKLWDTRSGRELCSLHGHKNIVLSVKWNQNGNWL 325
Query: 584 AAGVNSESIKLYDLRS 631
+ IKLYD+R+
Sbjct: 326 LTASKDQIIKLYDIRT 341
>At5g60940.2 68418.m07645 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 337
Score = 36.3 bits (80), Expect = 0.022
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGT--QM 265
K+ +++ ++ + + F ++ + IN +DF P LIS ++D+ I +D K T +
Sbjct: 62 KVKQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRA 121
Query: 266 ITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFP------GHTKKV 427
V + V I F H + + T D I +L N Y + P G + +
Sbjct: 122 FKVFQDTHNVRSISF-HPSGEFLLAGT--DHPIPHL-YDVNTYQCFLPSNFPDSGVSGAI 177
Query: 428 VTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ S +++ S D +RL+D S C
Sbjct: 178 NQVRYSSTGSIYITASKDGAIRLFDGVSAKC 208
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Frame = +2
Query: 137 AKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
+K E+ + FSP+G + D I +++ K QMI+ +++ + + H
Sbjct: 24 SKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDH 83
Query: 317 A----------KNTAIHSSTKVDDTIRYLSLHDNKYIRYFP--GHTKKVVTMCLSPVEDT 460
A ++T + SS K D+ I++ R F T V ++ P +
Sbjct: 84 AEPINDLDFHPRSTILISSAK-DNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 142
Query: 461 FLSGSLDKTLRLWDLRSPNC 520
L+G+ L+D+ + C
Sbjct: 143 LLAGTDHPIPHLYDVNTYQC 162
>At5g60940.1 68418.m07644 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to cleavage stimulation factor 50K chain Homo
sapiens, PIR:A45142
Length = 429
Score = 36.3 bits (80), Expect = 0.022
Identities = 36/151 (23%), Positives = 66/151 (43%), Gaps = 8/151 (5%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGT--QM 265
K+ +++ ++ + + F ++ + IN +DF P LIS ++D+ I +D K T +
Sbjct: 154 KVKQMISGDTQARPLIRTFYDHAEPINDLDFHPRSTILISSAKDNCIKFFDFSKTTAKRA 213
Query: 266 ITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFP------GHTKKV 427
V + V I F H + + T D I +L N Y + P G + +
Sbjct: 214 FKVFQDTHNVRSISF-HPSGEFLLAGT--DHPIPHL-YDVNTYQCFLPSNFPDSGVSGAI 269
Query: 428 VTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
+ S +++ S D +RL+D S C
Sbjct: 270 NQVRYSSTGSIYITASKDGAIRLFDGVSAKC 300
Score = 29.1 bits (62), Expect = 3.3
Identities = 30/140 (21%), Positives = 58/140 (41%), Gaps = 12/140 (8%)
Frame = +2
Query: 137 AKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
+K E+ + FSP+G + D I +++ K QMI+ +++ + + H
Sbjct: 116 SKTLSEHKSVVRCARFSPDGMFFATGGADTSIKLFEVPKVKQMISGDTQARPLIRTFYDH 175
Query: 317 A----------KNTAIHSSTKVDDTIRYLSLHDNKYIRYFP--GHTKKVVTMCLSPVEDT 460
A ++T + SS K D+ I++ R F T V ++ P +
Sbjct: 176 AEPINDLDFHPRSTILISSAK-DNCIKFFDFSKTTAKRAFKVFQDTHNVRSISFHPSGEF 234
Query: 461 FLSGSLDKTLRLWDLRSPNC 520
L+G+ L+D+ + C
Sbjct: 235 LLAGTDHPIPHLYDVNTYQC 254
>At3g05090.2 68416.m00553 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR--SPNCQGLMHLSGRPVAAYDPEGLIF 583
GH + V + ++ +SG +K LR+WD R S + + H V D G
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 584 AAGVNSESIKLYDL 625
+G + I+L+DL
Sbjct: 271 LSGSSDSMIRLWDL 284
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
GHT V + L LSGS D +RLWDL C
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRC 289
>At3g05090.1 68416.m00552 transducin family protein / WD-40 repeat
family protein contains seven G-protein beta WD-40
repeats; similar to uncharacterized KIAA1449 protein
(gi:7959157) [Homo sapiens]
Length = 753
Score = 36.3 bits (80), Expect = 0.022
Identities = 21/74 (28%), Positives = 34/74 (45%), Gaps = 2/74 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR--SPNCQGLMHLSGRPVAAYDPEGLIF 583
GH + V + ++ +SG +K LR+WD R S + + H V D G
Sbjct: 211 GHKESVYALAMNDTGTMLVSGGTEKVLRVWDPRTGSKSMKLRGHTDNVRVLLLDSTGRFC 270
Query: 584 AAGVNSESIKLYDL 625
+G + I+L+DL
Sbjct: 271 LSGSSDSMIRLWDL 284
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/37 (43%), Positives = 18/37 (48%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
GHT V + L LSGS D +RLWDL C
Sbjct: 253 GHTDNVRVLLLDSTGRFCLSGSSDSMIRLWDLGQQRC 289
>At2g16405.1 68415.m01878 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD-repeat protein 13 (SP:Q9H1Z4) [Homo
sapiens]
Length = 482
Score = 35.9 bits (79), Expect = 0.029
Identities = 22/80 (27%), Positives = 35/80 (43%), Gaps = 1/80 (1%)
Frame = +2
Query: 284 KYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDT 460
K V ++ F H + + D ++ SL + ++ GH+K V S
Sbjct: 172 KSSVTVLKFGHMSSDILAYGAS-DGSLTVCSLLEEPSVLKQLTGHSKDVTDFDFSSNNQY 230
Query: 461 FLSGSLDKTLRLWDLRSPNC 520
S SLDKT+R+W+L C
Sbjct: 231 IASSSLDKTIRVWELSRGVC 250
>At1g24130.1 68414.m03044 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats
(PF00400);similar to beta transducin-like protein
HET-D2Y (GI:17225210) [Podospora anserina].
Length = 415
Score = 35.5 bits (78), Expect = 0.038
Identities = 16/30 (53%), Positives = 20/30 (66%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
GH K + MCL+ D LSGS DK+LR+W
Sbjct: 326 GHRKAI--MCLAVASDLVLSGSADKSLRVW 353
>At1g21650.1 68414.m02710 preprotein translocase secA family protein
contains Pfam profiles: PF01043 SecA protein, amino
terminal region, PF00400 WD domain, G-beta repeat,
PF00097 zinc finger, C3HC4 type (RING finger)
Length = 1579
Score = 35.5 bits (78), Expect = 0.038
Identities = 20/51 (39%), Positives = 26/51 (50%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
D+TI+ SL D + GH V T+ + V SGS D T+RLW L
Sbjct: 606 DNTIKAWSLQDGSLLCTMSGHKSVVSTLVV--VNGVLYSGSWDGTVRLWSL 654
>At4g22910.1 68417.m03309 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); similar to fizzy-related
protein (GI:5813825) Drosophila melanogaster,
PID:g2326419;
Length = 518
Score = 35.1 bits (77), Expect = 0.050
Identities = 16/39 (41%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL-RSPNCQ 523
GHT +V+ + +SP T ++G+ D+TLR W++ SP Q
Sbjct: 463 GHTYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQ 501
>At3g15354.1 68416.m01939 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400);
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]
Length = 837
Score = 35.1 bits (77), Expect = 0.050
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 1/131 (0%)
Frame = +2
Query: 116 VVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGV 295
V RS V ++ +E+ ++ SID S TL++ DD G + T+ +K V
Sbjct: 613 VARSQLVTEM-KEHKKRVWSIDISSADPTLLASGSDD-------GTGVSIGTIKTKA-NV 663
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKY-IRYFPGHTKKVVTMCLSPVEDTFLSG 472
+ F ++ + D + Y L + K + GH+ K V+ T +S
Sbjct: 664 CCVQFPSDSGRSL-AFGSADHKVYYYDLRNPKIPLCTMIGHS-KTVSYVKFVDSSTLVSS 721
Query: 473 SLDKTLRLWDL 505
S D TL+LWDL
Sbjct: 722 STDNTLKLWDL 732
>At5g27570.1 68418.m03302 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; similar to "Will die slowly" protein,
Drosophia; putative cdc20 protein - Arabidopsis
thaliana, EMBL:AF029262
Length = 411
Score = 34.7 bits (76), Expect = 0.066
Identities = 29/123 (23%), Positives = 53/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV---NSKKYGVDLIHFTHAK 322
E + SI+++ +G L ++ ++ ++DC Q+ T+ + + G L H
Sbjct: 132 EEEGPVTSINWTQDGLDLAIGLDNSEVQLWDCVSNRQVRTLRGGHESRVG-SLAWNNHIL 190
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
T V++ +R S Y+ GHT++V + S SG D + +WD
Sbjct: 191 TTGGMDGKIVNNDVRIRSSIVETYL----GHTEEVCGLKWSESGKKLASGGNDNVVHIWD 246
Query: 503 LRS 511
RS
Sbjct: 247 HRS 249
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
GHT +V+ M SP T S + D+TLRLW++
Sbjct: 353 GHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 384
>At4g35370.1 68417.m05025 transducin family protein / WD-40 repeat
family protein contains 4 (3 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 414
Score = 34.7 bits (76), Expect = 0.066
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 4/113 (3%)
Frame = +2
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSP-VEDTFLSGSLDKTLRL 496
+N I +S D ++ + K H KKV + + + LSGS D+T+ L
Sbjct: 225 ENRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSRDRTVVL 284
Query: 497 WDLRSPNCQGLMHLSGRPV--AAYDPEG-LIFAAGVNSESIKLYDLRSFDKGP 646
D R P+ GL + V A+DP F + ++K +D R+ D P
Sbjct: 285 KDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSP 337
Score = 29.1 bits (62), Expect = 3.3
Identities = 37/170 (21%), Positives = 70/170 (41%), Gaps = 6/170 (3%)
Frame = +2
Query: 191 NGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRY 370
N + S SED ++ ++D G +T+ + V + + + + S ++ D T+
Sbjct: 226 NRNIVASGSEDKKVKVWDVATGKCKVTMEHHEKKVHAVAWNNYTPEVLLSGSR-DRTVVL 284
Query: 371 LSLHDNKYIRYFPGHTKKVVTMCLSP-VEDTFLSGSLDKTLRLWDLRSPNCQG--LMHLS 541
D KV + P E +F+ D T++ +D R+ + ++H
Sbjct: 285 KDGRDPSNSGLKWSTEAKVEKLAWDPHSEHSFVVSLKDGTVKGFDTRASDLSPSFIIHAH 344
Query: 542 GRPVAA--YDPEGL-IFAAGVNSESIKLYDLRSFDKGPFVTFKLNQEKGM 682
V++ Y+ + A G ES+KL+DL + T K N + M
Sbjct: 345 DSEVSSISYNIHAPNLLATGSADESVKLWDLSNNQPSWIATNKPNAVRAM 394
>At3g44600.1 68416.m04794 peptidyl-prolyl cis-trans isomerase
cyclophilin-type family protein similar to SP|P87051
Peptidyl-prolyl cis-trans isomerase cyp2 (EC 5.2.1.8)
(Cyclophilin cyp2) {Schizosaccharomyces pombe}; contains
Pfam profiles PF00160: peptidyl-prolyl cis-trans
isomerase cyclophilin-type, PF00400: WD domain G-beta
repeat
Length = 631
Score = 34.7 bits (76), Expect = 0.066
Identities = 20/77 (25%), Positives = 36/77 (46%), Gaps = 4/77 (5%)
Frame = +2
Query: 419 KKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGR--PV--AAYDPEGLIFA 586
+ VVT + F+SGS+D L+ W + + H P+ A +GL+
Sbjct: 70 RDVVTHVAVSAAEFFISGSMDGHLKFWKKKGVGIEFAKHFRSHLGPIEGLAVSIDGLLCC 129
Query: 587 AGVNSESIKLYDLRSFD 637
N ++K+YD+ ++D
Sbjct: 130 TISNDHAVKIYDVVNYD 146
Score = 29.9 bits (64), Expect = 1.9
Identities = 27/126 (21%), Positives = 46/126 (36%), Gaps = 5/126 (3%)
Frame = +2
Query: 137 AKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
AK FR + I + S +G + S D + IYD M + Y + + +
Sbjct: 106 AKHFRSHLGPIEGLAVSIDGLLCCTISNDHAVKIYDVVNYDMMAMIRLP-YIPGAVEWVY 164
Query: 317 AKNTAIHSSTKVDDTIRYLSLHD-----NKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLD 481
+ D ++ ++D N+ I H + M +PV DT +SG
Sbjct: 165 KQGDVKAKLAVSDRDSLFVHIYDPRSGSNEPIASKEIHMNPIKVMKYNPVSDTMISGDTK 224
Query: 482 KTLRLW 499
+ W
Sbjct: 225 GIIEYW 230
>At2g01330.1 68415.m00050 transducin family protein / WD-40 repeat
family protein contains 10 WD-40 repeats (PF00400);
similar to 66kDa stress protein (SWISS-PROT: P90587)[
Physarum polycephalum (Slime mold)]
Length = 474
Score = 34.7 bits (76), Expect = 0.066
Identities = 16/46 (34%), Positives = 28/46 (60%)
Frame = +2
Query: 128 FKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQM 265
FK RE+++ +N I +SP+G I+ S D + +IYD + G ++
Sbjct: 41 FKFHSSHREHSNFVNCIRYSPDGTKFITVSSDKKGMIYDGKTGDKV 86
Score = 31.5 bits (68), Expect = 0.62
Identities = 17/54 (31%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Frame = +2
Query: 155 NTDKINSIDFSPNGETLISCSEDDQIVIYDCEK-GTQMITV-NSKKYGVDLIHF 310
+T +INS+ +SPN + + + S D +++Y+ +K + IT N+ GV+ + F
Sbjct: 398 HTARINSLAWSPNNKMVATGSIDTCVIVYEVDKPASSRITARNAHLGGVNAVAF 451
>At4g32551.1 68417.m04633 WD-40 repeat family protein (LEUNIG)
contains seven G-protein beta WD-40 repeats; beta
transducin-like protein, Podospora anserina, gb:L28125;
contains Pfam profiles PF04503: Single-stranded DNA
binding protein, SSDP; PF00400:WD domain, G-beta repeat;
identical to cDNA LEUNIG (LEUNIG) GI:11141604
Length = 931
Score = 34.3 bits (75), Expect = 0.088
Identities = 27/123 (21%), Positives = 51/123 (41%), Gaps = 1/123 (0%)
Frame = +2
Query: 140 KVFRENTDKINSIDFSPNGETLI-SCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
+ F ++ + S+DF P + LI SC D++I + G+ K G I F
Sbjct: 730 RTFMGHSSMVTSLDFHPIKDDLICSCDNDNEIRYWSINNGS---CTRVYKGGSTQIRFQP 786
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
+ +S+ + + L + GH + ++C P D FL+ + +++
Sbjct: 787 RVGKYLAASSA--NLVNVLDVETQAIRHSLQGHANPINSVCWDPSGD-FLASVSEDMVKV 843
Query: 497 WDL 505
W L
Sbjct: 844 WTL 846
Score = 33.1 bits (72), Expect = 0.20
Identities = 26/120 (21%), Positives = 54/120 (45%), Gaps = 5/120 (4%)
Frame = +2
Query: 155 NTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQ-----MITVNSKKYGVDLIHFTHA 319
+ + INS+ + P+G+ L S SE D + ++ G++ ++ N K+ + H +
Sbjct: 817 HANPINSVCWDPSGDFLASVSE-DMVKVWTLGTGSEGECVHELSCNGNKFQSCVFHPAYP 875
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
I ++ ++ +NK + P H + ++ +S S S DK ++LW
Sbjct: 876 SLLVIGCY----QSLELWNMSENKTMT-LPAHEGLITSLAVSTATGLVASASHDKLVKLW 930
Score = 29.1 bits (62), Expect = 3.3
Identities = 27/109 (24%), Positives = 41/109 (37%), Gaps = 5/109 (4%)
Frame = +2
Query: 191 NGETLISCSEDDQ----IVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTKVDD 358
N E+ +S + DQ D KG VNS + + H + ++ D
Sbjct: 613 NVESFLSQEDGDQRDAVTRCMDVSKGFTFTEVNSVRASTTKVTCCHFSSDGKMLASAGHD 672
Query: 359 TIRYLSLHDN-KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
L D K HT + + SP + + S DKT+R+WD
Sbjct: 673 KKAVLWYTDTMKPKTTLEEHTAMITDIRFSPSQLRLATSSFDKTVRVWD 721
>At4g11270.1 68417.m01823 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TGF-beta resistance-associated protein TRAG
(GI:15624071) {Mus musculus}; similar to
beta-transducin repeats containing protein - Homo
sapiens,PID:e1284220; 3' EST no_NP:TC8031
Length = 1446
Score = 34.3 bits (75), Expect = 0.088
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 464 LSGSLDKTLRLWDLRSPNCQGLMHLSGRPV 553
+SGS+D T+R+WDL S N +MH PV
Sbjct: 553 ISGSMDCTIRIWDLESGNVIMIMHHHVAPV 582
>At4g34280.1 68417.m04873 transducin family protein / WD-40 repeat
family protein similar to TUPA (GI:11066216) [Emericella
nidulans]; similar to damage-specific DNA binding
protein 2, Homo sapiens ,PIR2:I38909; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies,1
weak)|19797453|gb|AU229277.1|AU229277
Length = 783
Score = 33.9 bits (74), Expect = 0.12
Identities = 20/113 (17%), Positives = 54/113 (47%), Gaps = 2/113 (1%)
Frame = +2
Query: 161 DKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQM-ITVNSKKYGVDLIHFTHAKNTAIH 337
D++ S+ + + ++ + +YD +GT++ + N + ++++ F++ + +
Sbjct: 541 DQLTSVHANSTDQLFLASGYSKDVALYDIGRGTRLQVFANMHQEHINVVKFSN-HSPFLF 599
Query: 338 SSTKVDDTIRYLSL-HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
+++ D ++ L + Y TK V +C SP + L+ ++D +R
Sbjct: 600 ATSSFDKDVKLWDLRQEPSRPCYTASSTKGNVMVCFSPDDRYLLASAVDNEVR 652
Score = 29.9 bits (64), Expect = 1.9
Identities = 29/148 (19%), Positives = 65/148 (43%), Gaps = 14/148 (9%)
Frame = +2
Query: 203 LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSSTK-----VDDTIR 367
+I+ S + + +YD +K + +T +S + + T++H+++ +
Sbjct: 503 VIAGSANGSLKLYDIQKASSTVTTSSHSTSGSVTFDEFDQLTSVHANSTDQLFLASGYSK 562
Query: 368 YLSLHD---NKYIRYFPGHTKKVVTMCLSPVEDTFL--SGSLDKTLRLWDLR---SPNCQ 523
++L+D ++ F ++ + + FL + S DK ++LWDLR S C
Sbjct: 563 DVALYDIGRGTRLQVFANMHQEHINVVKFSNHSPFLFATSSFDKDVKLWDLRQEPSRPCY 622
Query: 524 GLMHLSGRPVAAYDPEG-LIFAAGVNSE 604
G + + P+ + A+ V++E
Sbjct: 623 TASSTKGNVMVCFSPDDRYLLASAVDNE 650
>At4g28450.1 68417.m04071 transducin family protein / WD-40 repeat
family protein SOF1 (involved in rRNA processing)
protein-yeast
Length = 442
Score = 33.9 bits (74), Expect = 0.12
Identities = 17/61 (27%), Positives = 29/61 (47%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
S +D IR + + + FPGH V + S + +S D T+RLW++ P+
Sbjct: 74 SASMDGDIRLWDISSRRTVCQFPGHQGAVRGLTASTDGNVLVSCGTDCTVRLWNVPRPSL 133
Query: 521 Q 523
+
Sbjct: 134 E 134
>At1g49910.1 68414.m05597 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP:O43684)[Homo sapiens]
Length = 339
Score = 33.9 bits (74), Expect = 0.12
Identities = 37/165 (22%), Positives = 65/165 (39%), Gaps = 4/165 (2%)
Frame = +2
Query: 158 TDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIH 337
+D I+++ FS N + L+ S D + +YD ++ K G L H ++
Sbjct: 16 SDGISNLRFSNNSDHLLVSSWDKSVRLYDANG--DLMRGEFKHGGAVLDCCFHDDSSGF- 72
Query: 338 SSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLR--- 508
S D +R + + K H K V + S ++GS DKT++ WD R
Sbjct: 73 -SVCADTKVRRIDFNAGKE-DVLGTHEKPVRCVEYSYAAGQVITGSWDKTIKCWDPRGAS 130
Query: 509 -SPNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
+ Q ++ V + G + +YDLR+ +
Sbjct: 131 GTERTQIGTYMQPERVNSLSLVGNRLVVATAGRHVNIYDLRNMSQ 175
>At1g24530.1 68414.m03088 transducin family protein / WD-40 repeat
family protein similar to Vegetatible incompatibility
protein HET-E-1 (SP:Q00808) {Podospora anserina};
contains 7 WD-40 repeats (PF00400)
Length = 418
Score = 33.9 bits (74), Expect = 0.12
Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 8/125 (6%)
Frame = +2
Query: 149 RENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKG----TQMITVNSKKYGVDLIHFTH 316
+ + D +N+I S NG T+ + S D +I ++ G T + T+ K V+ +
Sbjct: 232 KAHDDAVNAIAVSTNG-TVYTGSADRRIRVWAKPTGEKRHTLVATLEKHKSAVNALALND 290
Query: 317 AKNTAIHSSTKVDDTIRYLSLHD-NKYIRY---FPGHTKKVVTMCLSPVEDTFLSGSLDK 484
+ ++ S D +I D + Y+ GH K +++ L V D LSGS D+
Sbjct: 291 --DGSVLFSGSCDRSILVWEREDTSNYMAVRGALRGHDKAILS--LFNVSDLLLSGSADR 346
Query: 485 TLRLW 499
T+R+W
Sbjct: 347 TVRIW 351
>At1g16160.1 68414.m01936 protein kinase family protein contains
similarity to wall-associated kinase 4 GI:3355308 from
[Arabidopsis thaliana]
Length = 711
Score = 33.9 bits (74), Expect = 0.12
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 2/44 (4%)
Frame = -3
Query: 160 CIFTEYFGNFKASDNLINEFHHF--YAYNRCFCSLIFTLNKLQR 35
CI Y G++ + D+ + E+ +F +Y C+CSL FT N R
Sbjct: 250 CINLTYSGSYLSGDSCLCEYGYFSEMSYRNCYCSLGFTGNPYLR 293
>At4g11920.1 68417.m01895 WD-40 repeat family protein contains 6 WD
repeats (PF00400); similar to Fzr1 (GI:6463679) {Homo
sapiens}; similar to WD repeat protein Srw1
-Schizosaccharomyces pombe,PID:d1023012
Length = 475
Score = 33.5 bits (73), Expect = 0.15
Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL-RSPNCQ 523
GH+ +V+ + +SP T ++G+ D+TLR W++ SP Q
Sbjct: 420 GHSYRVLYLAVSPDGQTIVTGAGDETLRFWNVFPSPKSQ 458
>At3g53390.1 68416.m05892 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 558
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/87 (27%), Positives = 39/87 (44%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSST 346
INSI FS +G L + D + I+D TQ + K Y L+ + + + +
Sbjct: 306 INSIAFSNDGAHLATVGRDGYLRIFDFL--TQKLVCGGKSYYGALLCCSWSMDGKYILTG 363
Query: 347 KVDDTIRYLSLHDNKYIRYFPGHTKKV 427
DD ++ S+ D K + + GH V
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWV 390
>At2g37160.1 68415.m04559 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to Dystrophia myotonica-containing WD repeat
motif protein DMR-N9 protein (DMWD) (DM9) (SP:Q08274)
[Mus musculus]; simlar to DMR protein GI:18028289 [Homo
sapiens];
Length = 544
Score = 33.5 bits (73), Expect = 0.15
Identities = 24/87 (27%), Positives = 38/87 (43%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSST 346
INSI FS +G L + D + I+D TQ + K Y L+ + + +
Sbjct: 306 INSIAFSNDGAYLATVGRDGYLRIFDF--STQKLVCGVKSYYGALLCCAWSMDGKYLLTG 363
Query: 347 KVDDTIRYLSLHDNKYIRYFPGHTKKV 427
DD ++ S+ D K + + GH V
Sbjct: 364 GEDDLVQVWSMEDRKVVAWGEGHNSWV 390
>At5g54520.1 68418.m06788 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to pre-mRNA splicing
factor PRP17 (SP:O60508) [Homo sapiens]
Length = 457
Score = 33.1 bits (72), Expect = 0.20
Identities = 19/92 (20%), Positives = 41/92 (44%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHF 310
K + F + + + +S G +L+SC D ++D E+G + + + V ++ F
Sbjct: 196 KKVRAFLHHNAPVKDVKWSKQGLSLLSCGYDCTSRLFDVERGVETQSFKEDEV-VGVVKF 254
Query: 311 THAKNTAIHSSTKVDDTIRYLSLHDNKYIRYF 406
H N + S ++R + NK++ +
Sbjct: 255 -HPDNCNVFLSGGSKGSLRLWDIRANKFVHEY 285
Score = 30.7 bits (66), Expect = 1.1
Identities = 15/30 (50%), Positives = 20/30 (66%)
Frame = +2
Query: 179 DFSPNGETLISCSEDDQIVIYDCEKGTQMI 268
+FSP+GETL S S D + +YD K T +I
Sbjct: 393 NFSPDGETLASGSSDGSVYMYD-YKSTALI 421
>At5g27945.1 68418.m03364 transducin family protein / WD-40 repeat
family protein fizzy-related (FZR); contains 6 WD-40
repeats (PF00400); WD-repeat protein,
carrot,(gi:2253631) PIR:T14352
Length = 428
Score = 33.1 bits (72), Expect = 0.20
Identities = 15/32 (46%), Positives = 21/32 (65%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
GHT +V+ M SP T S + D+TLRLW++
Sbjct: 370 GHTSRVLFMAQSPDGCTVASAAGDETLRLWNV 401
Score = 30.7 bits (66), Expect = 1.1
Identities = 28/127 (22%), Positives = 54/127 (42%), Gaps = 3/127 (2%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV---NSKKYGVDL 301
K+ + EN + SI+++ +G L ++ ++ ++DC + T+ + + G L
Sbjct: 144 KLVTIDDEN-GPVTSINWTQDGLDLAVGLDNSEVQVWDCVSNRHVRTLRGGHESRVG-SL 201
Query: 302 IHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLD 481
H T V++ +R S Y+ GHT++V + S SG D
Sbjct: 202 AWNNHILTTGGMDGKIVNNDVRIRSSIIGTYV----GHTEEVCGLKWSESGKKLASGGND 257
Query: 482 KTLRLWD 502
+ +WD
Sbjct: 258 NVVHIWD 264
>At5g27080.1 68418.m03231 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis};
Length = 466
Score = 33.1 bits (72), Expect = 0.20
Identities = 30/125 (24%), Positives = 57/125 (45%), Gaps = 5/125 (4%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSE---DDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
F E+T + ++ + P TL++ D +I ++ G + +V + L+
Sbjct: 294 FEEHTAAVRALAWCPFQATLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLLWSQR 353
Query: 317 AKNT-AIHSSTKVDDTI-RYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTL 490
+ + H T+ T+ +Y S+ + GHT +V+ M SP T S + D+ L
Sbjct: 354 ERELLSSHGFTQNQLTLWKYPSMSKMAELN---GHTSRVLFMAQSPNGCTVASAAGDENL 410
Query: 491 RLWDL 505
RLW++
Sbjct: 411 RLWNV 415
>At3g42660.1 68416.m04436 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400); AND-1
protein - Homo sapiens, EMBL:AJ006266
Length = 951
Score = 33.1 bits (72), Expect = 0.20
Identities = 22/130 (16%), Positives = 48/130 (36%), Gaps = 6/130 (4%)
Frame = +2
Query: 134 VAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVN----SKKYGVDL 301
+ +V + + + +DF PNGE L S ++ ++ + G T+ + +
Sbjct: 138 IVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWELQNGVVSFTLKGVAPDTGFNTSI 197
Query: 302 IHFTH--AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGS 475
++ + +D + Y K H + + + +P +
Sbjct: 198 VNIPRWSPDGRTLAVPGLRNDVVMYDRFTGEKLFALRGDHLEAICYLTWAPNGKYIATSG 257
Query: 476 LDKTLRLWDL 505
LDK + LWD+
Sbjct: 258 LDKQVLLWDV 267
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/123 (18%), Positives = 50/123 (40%)
Frame = +2
Query: 143 VFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAK 322
+ R + D + S+ S + L S S D + +Y G + + ++ F +
Sbjct: 57 ILRHHQDGVTSLALSNDSTLLASGSIDHCVKLYKFPSGEFQTNITRFTLPIRVLAFNGSG 116
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
+ + ++ D+ I+ ++ D +R GH V + P + S T+ W+
Sbjct: 117 S--LLAAAGDDEGIKLINTFDGSIVRVLKGHKGPVTGLDFHPNGELLASIDTTGTVLCWE 174
Query: 503 LRS 511
L++
Sbjct: 175 LQN 177
>At3g18060.1 68416.m02297 transducin family protein / WD-40 repeat
family protein similar to 66 kDa stress protein
(SP:P90587) [Physarum polycephalum (Slime mold)];
similar to WDR1 protein GB:AAD05042 [Gallus gallus]
(Genomics 56 (1), 59-69 (1999)); contains 11 WD-40
repeats (PF00400)
Length = 609
Score = 33.1 bits (72), Expect = 0.20
Identities = 14/39 (35%), Positives = 24/39 (61%)
Frame = +2
Query: 128 FKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYD 244
FK RE+++ +N + F+P+G I+ S D + +IYD
Sbjct: 177 FKFKLSSREHSNFVNCVRFAPDGSKFITVSSDKKGIIYD 215
Score = 32.3 bits (70), Expect = 0.35
Identities = 37/140 (26%), Positives = 59/140 (42%), Gaps = 8/140 (5%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCE---KGTQMITVN--SKKYGV-DLIHFTHAKNT 328
I ++ +SP+G+ +++ S D I+D G+ T+N GV D++ +N
Sbjct: 235 IYAVSWSPDGKQVLTVSADKSAKIWDISDNGSGSLNTTLNCPGSSGGVDDMLVGCLWQND 294
Query: 329 AIHSSTKVDDTIRYLSLHD-NKYIRYFPGHTKKVVTMC-LSPVEDTFLSGSLDKTLRLWD 502
I + + TI S D +K F GH K V ++ L D LSGS D + W
Sbjct: 295 HI-VTVSLGGTISIFSASDLDKSPFQFSGHMKNVSSLAVLKGNADYILSGSYDGLICKWM 353
Query: 503 LRSPNCQGLMHLSGRPVAAY 562
L C L + +
Sbjct: 354 LGRGFCGKLQRTQNSQIKCF 373
Score = 28.7 bits (61), Expect = 4.4
Identities = 15/62 (24%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Frame = +2
Query: 110 DQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEK-GTQMITVNSKK 286
D+V R K+ + + +IN + +SPN + + S D +++Y+ +K + +T+
Sbjct: 519 DRVSREMKLKNMLYHSA-RINCLAWSPNSTMVATGSLDTCVIVYEVDKPASSRMTIKGAH 577
Query: 287 YG 292
G
Sbjct: 578 LG 579
>At3g15610.1 68416.m01980 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to serine/threonine kinase receptor associated
protein GB:NP_035629 (SP:Q9Z1Z2) [Mus musculus];
UNR-interacting protein GB:NP_009109 [Homo sapiens]
Length = 341
Score = 33.1 bits (72), Expect = 0.20
Identities = 16/49 (32%), Positives = 24/49 (48%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
D +R H K I GH V + +P +++ SGS D T+R+W
Sbjct: 249 DMWVRLFDFHTGKEIGCNKGHHGPVHCVRFAPTGESYASGSEDGTIRIW 297
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/86 (24%), Positives = 32/86 (37%), Gaps = 1/86 (1%)
Frame = +2
Query: 392 YIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD-LRSPNCQGLMHLSGRPVAAYDP 568
+I F GH V + CL S S D + +LWD L H A+
Sbjct: 53 WIGTFEGHKGAVWSSCLDNNALRAASASADFSAKLWDALTGDVLHSFEHKHIVRACAFSQ 112
Query: 569 EGLIFAAGVNSESIKLYDLRSFDKGP 646
+ G + ++++DL D P
Sbjct: 113 DTKYLITGGFEKILRVFDLNRLDAPP 138
>At4g00090.1 68417.m00009 transducin family protein / WD-40 repeat
family protein similar to Transducin beta-like 2 protein
(WS beta-transducin repeats protein) (WS-betaTRP)
(Williams-Beuren syndrome chromosome region 13 protein)
(SP:Q9Y4P3) {Homo sapiens}
Length = 430
Score = 32.7 bits (71), Expect = 0.27
Identities = 23/107 (21%), Positives = 47/107 (43%), Gaps = 6/107 (5%)
Frame = +2
Query: 203 LISCSEDDQIVIYDCEKGTQM--ITVNSKKYGVDLI--HFTHAKNTAIHSSTKVDDTIRY 370
+ SCSE IV++ + G + + N K + + + A + KV + +
Sbjct: 212 IASCSEGTDIVLWHGKTGRNLGHVDTNQLKNHMAAVSPNGRFLAAAAFTADVKVWEIVYQ 271
Query: 371 L--SLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
S+ + + GH V +C SP + ++ S D ++R+W++
Sbjct: 272 KDGSVKEVSRVMQLKGHKSAVTWLCFSPNSEQIITASKDGSIRVWNI 318
>At2g45540.1 68415.m05663 WD-40 repeat family protein / beige-related
contains Pfam PF02138: Beige/BEACH domain; contains Pfam
PF00400: WD domain, G-beta repeat (3 copies)
Length = 2946
Score = 32.7 bits (71), Expect = 0.27
Identities = 16/49 (32%), Positives = 26/49 (53%)
Frame = +2
Query: 353 DDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
D++I+ +S K + GH V + LSP + ++GS D T+ LW
Sbjct: 2647 DNSIKLVSSDGAKTLETAFGHCAPVTCLALSPDNNFLVTGSRDSTVLLW 2695
>At5g63010.1 68418.m07905 WD-40 repeat family protein contains 4
WD-40 repeats (PF00400);low similarity to
photomorphogenesis repressor (COP1) GI:2702280
[Arabidopsis thaliana] and COP1 GI:11127996 [Ipomoea
nil]
Length = 343
Score = 32.3 bits (70), Expect = 0.35
Identities = 16/44 (36%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 383 DNKYIRYFPGHTKKVVTMCLSPVED-TFLSGSLDKTLRLWDLRS 511
DN+ + HT V + +P + + +GS D+TLR+WD RS
Sbjct: 199 DNRVFQNSKVHTMGVCCISSNPSDPYSIFTGSYDETLRVWDTRS 242
>At5g26900.1 68418.m03208 WD-40 repeat family protein contains 5
WD-40 repeats (PF00400); similar to fizzy1 (GI:3298595)
{Xenopus laevis}; WD-repeat protein, carrot, PIR:T14352
Length = 444
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/120 (22%), Positives = 53/120 (44%), Gaps = 3/120 (2%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV---NSKKYGVDLIHFTHAK 322
E+ + SI+++ +G L ++ ++ ++DC Q+ T+ + + G L H
Sbjct: 166 EDKGPVTSINWTQDGLDLAVGLDNSEVQLWDCVSNRQVRTLRGGHESRVG-SLAWDNHIL 224
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
T V++ +R S Y+ GHT++V + S + SG D + +WD
Sbjct: 225 TTGGMDGKIVNNDVRIRSSIVETYL----GHTEEVCGLKWSESGNKQASGGNDNVVHIWD 280
Score = 31.9 bits (69), Expect = 0.47
Identities = 25/123 (20%), Positives = 54/123 (43%), Gaps = 3/123 (2%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSE---DDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
F E+T + ++ + P +L++ D +I ++ G + +V + L+ ++
Sbjct: 296 FEEHTAAVRALAWCPFQASLLATGGGVGDGKIKFWNTHTGACLNSVETGSQVCSLL-WSQ 354
Query: 317 AKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRL 496
++ + S + + + GHT +V+ M SP T S + D+ LRL
Sbjct: 355 SERELLSSHGFTQNQLTLWKYPSMSKMAELNGHTSRVLFMAQSPNGCTVASAAGDENLRL 414
Query: 497 WDL 505
W++
Sbjct: 415 WNV 417
>At3g13340.1 68416.m01679 WD-40 repeat family protein contains Pfam
profile: PF00400 WD domain, G-beta repeat (3 copies, 1
significant); similar to Trp-Asp repeat protein
(PIR:T40094) [Schizosaccharomyces]
Length = 447
Score = 32.3 bits (70), Expect = 0.35
Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVA---- 556
K + GH P TF +G+ DKT R+WD+R+ + Q + L G A
Sbjct: 310 KTLETLSGHLDFSFASAWHPDGVTFSTGNQDKTCRVWDIRNLS-QSVTVLKGNLGAIRSI 368
Query: 557 AYDPEGLIFAAGVNSESIKLYDL 625
Y +G A ++ + +YD+
Sbjct: 369 RYTSDGKYMAMAEPADFVHVYDV 391
>At1g48870.1 68414.m05474 WD-40 repeat family protein contains Pfam
PF00400: WD domain, G-beta repeat; similar to WD-repeat
protein 5 (WD repeat protein BIG-3) (SP: Q9UGP9) [Homo
sapiens]; similar to rab11 binding protein GI:4512103
from [Bos taurus]
Length = 593
Score = 32.3 bits (70), Expect = 0.35
Identities = 27/116 (23%), Positives = 50/116 (43%), Gaps = 2/116 (1%)
Frame = +2
Query: 296 DLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV-EDTFLSG 472
D++ + + + S++K D T+R ++ + F H V + +PV ++ F SG
Sbjct: 274 DVLDLAWSDSNLLLSASK-DKTVRLWRTGCDQCLHVFH-HNNYVTCVEFNPVNKNNFASG 331
Query: 473 SLDKTLRLWDLRSPNCQGLMHLSGRPVA-AYDPEGLIFAAGVNSESIKLYDLRSFD 637
S+D R+W L + A +Y P G F G + + + Y + D
Sbjct: 332 SIDGKARIWGLSEERVVAWTDVRDSISAISYQPNGNGFVVGCITGNCRFYQILDND 387
Score = 31.1 bits (67), Expect = 0.82
Identities = 31/124 (25%), Positives = 52/124 (41%)
Frame = +2
Query: 164 KINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIHSS 343
KI ++ FSP+G+ L + ED + I+ IT++ L F + +
Sbjct: 200 KIWTLKFSPDGKYLATGGEDGVVKIW-------RITLSDSL----LASFLRQQEPINQQA 248
Query: 344 TKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQ 523
V + + + + + GHT V+ + S + LS S DKT+RLW C
Sbjct: 249 ALVLFPQKAFHIEETPFQELY-GHTGDVLDLAWSD-SNLLLSASKDKTVRLWRTGCDQCL 306
Query: 524 GLMH 535
+ H
Sbjct: 307 HVFH 310
>At5g43920.1 68418.m05372 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to will die slowly protein (WDS) (SP:Q9V3J8)
[Drosophila melanogaster]
Length = 523
Score = 31.9 bits (69), Expect = 0.47
Identities = 28/162 (17%), Positives = 67/162 (41%), Gaps = 2/162 (1%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV--NSKKYGVDLIHFTHAKNTAIHS 340
++ + +SP+ L++C + + ++D + G T N+ + V + +
Sbjct: 272 VSFVSWSPDDTKLLTCGNAEVLKLWDVDTGVLRHTFGNNNTGFTVSSCAWFPDSTRLVCG 331
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
S+ + I N+ + KVV + ++P ++ ++ DK +R+ +L +
Sbjct: 332 SSDPERGIVMWDTDGNEIKAWRGTRIPKVVDLAVTPDGESMITVFSDKEIRILNLETKVE 391
Query: 521 QGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDKGP 646
+ + + +G F ++ + I L+DL K P
Sbjct: 392 RVISEEQPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQP 433
Score = 30.3 bits (65), Expect = 1.4
Identities = 30/132 (22%), Positives = 56/132 (42%), Gaps = 3/132 (2%)
Frame = +2
Query: 131 KVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCE-KGTQMITVNSKKYGVDLIH 307
KV +V E I S+ S +G+ I +I ++D + Q + + + +I
Sbjct: 389 KVERVISEE-QPITSLSISGDGKFFIVNLSCQEIHLWDLAGEWKQPLKFSGHRQSKYVIR 447
Query: 308 FTHAK-NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLD 481
+++ +S D + +L + K + GH+ V + +P L S S D
Sbjct: 448 SCFGGLDSSFIASGSEDSQVYIWNLKNTKPLEVLSGHSMTVNCVSWNPKNPRMLASASDD 507
Query: 482 KTLRLWDLRSPN 517
+T+R+W PN
Sbjct: 508 QTIRIWGPGKPN 519
>At3g19590.1 68416.m02484 WD-40 repeat family protein / mitotic
checkpoint protein, putative contains 5 WD-40 repeats
(PF00400) (1 weak); similar to testis mitotic checkpoint
protein BUB3 (GB:AAC28439,SP|O43684)[Homo sapiens]
Length = 340
Score = 31.9 bits (69), Expect = 0.47
Identities = 39/170 (22%), Positives = 68/170 (40%), Gaps = 9/170 (5%)
Frame = +2
Query: 158 TDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKNTAIH 337
+D I+++ FS N + L+ S D ++ +YD ++ NS K + +H + H
Sbjct: 17 SDGISNLRFSNNSDHLLVSSWDKRVRLYD-------VSTNSLKG--EFLHGGAVLDCCFH 67
Query: 338 S-----STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
S D +R + + K H K V + S ++GS DKT++ WD
Sbjct: 68 DDFSGFSVGADYKVRRIVFNVGKE-DILGTHDKAVRCVEYSYAAGQVITGSWDKTVKCWD 126
Query: 503 LRSPN----CQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
R + Q +L V + G + +YDLR+ +
Sbjct: 127 PRGASGPERTQVGTYLQPERVYSMSLVGHRLVVATAGRHVNIYDLRNMSQ 176
>At2g26060.1 68415.m03129 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to WD40-repeat containing protein Ciao 1
(SP:O76071) [Homo sapiens]
Length = 352
Score = 31.9 bits (69), Expect = 0.47
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 6/132 (4%)
Frame = +2
Query: 122 RSFKVAKVFRE-NTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQ---MITVNSKKY 289
RS+ V E +T + S +SP+G+ L + S D I+ G++ + T+ +
Sbjct: 61 RSWTCKTVLEETHTRTVRSCAWSPSGQLLATASFDGTTGIWK-NYGSEFECISTLEGHEN 119
Query: 290 GVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKY--IRYFPGHTKKVVTMCLSPVEDTF 463
V + + +A + + + ++ + L N+Y GHT+ V + P D
Sbjct: 120 EVKSVSW-NASGSCLATCSRDKSVWIWEVLEGNEYDCAAVLTGHTQDVKMVQWHPTMDVL 178
Query: 464 LSGSLDKTLRLW 499
S S D T+++W
Sbjct: 179 FSCSYDNTIKVW 190
>At5g58230.1 68418.m07290 WD-40 repeat protein (MSI1) contains 6
WD-40 repeats (PF0400); identical to WD-40 repeat
protein (SP:O22467) [Arabidopsis thaliana]
Length = 424
Score = 31.5 bits (68), Expect = 0.62
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 8/80 (10%)
Frame = +2
Query: 461 FLSGSL--DKTLRLWDLRSPNCQG-----LMHLSGRPVAAYDP-EGLIFAAGVNSESIKL 616
+L GS+ D+ L +WDLRSP+ + H A++P + A G +++KL
Sbjct: 241 YLFGSVGDDQYLLIWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKL 300
Query: 617 YDLRSFDKGPFVTFKLNQEK 676
+DLR TF ++E+
Sbjct: 301 FDLRKLSTA-LHTFDSHKEE 319
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/82 (23%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVA-KVFRENTDKINSIDFSPNGETLI-SCSEDDQIVIYDCEKGTQM 265
K +KL D +R A F + +++ + ++P ET++ SC +++++D + +
Sbjct: 296 KTVKLFD--LRKLSTALHTFDSHKEEVFQVGWNPKNETILASCCLGRRLMVWDLSRIDEE 353
Query: 266 ITVNSKKYGVDLIHFTHAKNTA 331
TV + G + F H +T+
Sbjct: 354 QTVEDAEDGPPELLFIHGGHTS 375
Score = 28.7 bits (61), Expect = 4.4
Identities = 26/111 (23%), Positives = 54/111 (48%), Gaps = 9/111 (8%)
Frame = +2
Query: 203 LISCSEDDQIVIYDCEKGTQMITVNSKKY-----GVDLIHFTHAKNTAIHSSTKVDDTIR 367
L+S S+D QI ++D + ++++++ GV H ++ + S D +
Sbjct: 194 LLSGSDDAQICLWDINATPKNKSLDAQQIFKAHEGVVEDVAWHLRHEYLFGSVGDDQYLL 253
Query: 368 YLSLHD---NKYIRYFPGHTKKVVTMCLSPVEDTFLS-GSLDKTLRLWDLR 508
L +K ++ H+ +V + +P + ++ GS DKT++L+DLR
Sbjct: 254 IWDLRSPSASKPVQSVVAHSMEVNCLAFNPFNEWVVATGSTDKTVKLFDLR 304
>At4g33270.1 68417.m04734 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota,PID:g2253631
Length = 457
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
GHT +V+ M SP T S + D+TLR W++
Sbjct: 400 GHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 431
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV---NSKKYGVDLIHFTHAK 322
E + SI+++P+G + + ++ ++D Q+ T+ + + G L H
Sbjct: 180 EEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVG-SLAWNNHIL 238
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
T +++ +R S + + GHT++V + S SG D + +WD
Sbjct: 239 TTGGMDGLIINNDVRIRS----PIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 294
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 464 LSGSLDKTLRLWDLRSPNCQGLMHLSGR--PVAAYD--PEGLIFAAGVNSESIKLYDLRS 631
L+ +LD T+ LWD + + L+ + PV + + P+G A G+N+ ++L+D S
Sbjct: 154 LAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS 213
>At4g33260.1 68417.m04733 WD-40 repeat family protein contains 6
WD-40 repeats (PF00400); WD-repeat protein -Daucus
carota, PID:g2253631
Length = 447
Score = 31.5 bits (68), Expect = 0.62
Identities = 14/32 (43%), Positives = 20/32 (62%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
GHT +V+ M SP T S + D+TLR W++
Sbjct: 390 GHTSRVLYMAQSPDGCTVASAAGDETLRFWNV 421
Score = 30.7 bits (66), Expect = 1.1
Identities = 24/120 (20%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +2
Query: 152 ENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITV---NSKKYGVDLIHFTHAK 322
E + SI+++P+G + + ++ ++D Q+ T+ + + G L H
Sbjct: 170 EEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSASNRQLRTLKGGHQSRVG-SLAWNNHIL 228
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
T +++ +R S + + GHT++V + S SG D + +WD
Sbjct: 229 TTGGMDGLIINNDVRIRS----PIVETYRGHTQEVCGLKWSGSGQQLASGGNDNVVHIWD 284
Score = 29.9 bits (64), Expect = 1.9
Identities = 18/60 (30%), Positives = 33/60 (55%), Gaps = 4/60 (6%)
Frame = +2
Query: 464 LSGSLDKTLRLWDLRSPNCQGLMHLSGR--PVAAYD--PEGLIFAAGVNSESIKLYDLRS 631
L+ +LD T+ LWD + + L+ + PV + + P+G A G+N+ ++L+D S
Sbjct: 144 LAIALDHTVYLWDASTGSTSELVTIDEEKGPVTSINWAPDGRHVAVGLNNSEVQLWDSAS 203
>At4g18905.1 68417.m02787 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 494
Score = 31.5 bits (68), Expect = 0.62
Identities = 23/81 (28%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
Frame = +2
Query: 413 HTKKVVTMCLSP-VEDTFLSGSLDKTLRLWDLRSPNCQGLMH--LSGRPVAAYDPE-GLI 580
HTK+V + + + LSGS D+T+ + D R P+ G +S A+DP
Sbjct: 307 HTKEVQAVAWNHYAPEVLLSGSFDQTVVMKDGRQPSHSGFKWSVMSDVESLAWDPHCEHS 366
Query: 581 FAAGVNSESIKLYDLRSFDKG 643
F + ++K +D+R+ G
Sbjct: 367 FVVSLEDGTVKGFDIRAAQSG 387
>At3g43890.1 68416.m04698 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 661
Score = 31.1 bits (67), Expect = 0.82
Identities = 12/39 (30%), Positives = 20/39 (51%)
Frame = +2
Query: 200 TLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTH 316
T +C +D Y C++ VN +KY ++ HF+H
Sbjct: 150 TCAACGKDGDGYSYKCQECNLTFHVNCEKYPAEVTHFSH 188
>At3g06880.1 68416.m00817 transducin family protein / WD-40 repeat
family protein similar to PAK/PLC-interacting protein 1
(GI:4211689) {Homo sapiens}
Length = 1115
Score = 31.1 bits (67), Expect = 0.82
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 413 HTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
H V LS + LSGS DKT+R+W +
Sbjct: 894 HKSTVTCFSLSETGECVLSGSADKTIRVWQI 924
>At2g20330.1 68415.m02374 transducin family protein / WD-40 repeat
family protein similar to Transcriptional repressor
rco-1 (SP:P78706) [Neurospora crassa]; similar to
TUP1(GB:AF079369); contains 6 WD-40 repeats (PF00400)
Length = 648
Score = 31.1 bits (67), Expect = 0.82
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPN 517
GHTK V ++ + LSGS D T+R++D + N
Sbjct: 175 GHTKIVSSLAVDSAGARVLSGSYDYTVRMYDFQGMN 210
Score = 28.7 bits (61), Expect = 4.4
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 5/69 (7%)
Frame = +2
Query: 413 HTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPN-----CQGLMHLSGRPVAAYDPEGL 577
HT + ++ S LS S D +L++WDLR +GL + + A+ P+
Sbjct: 372 HTDDITSVKFSSDGRILLSRSFDGSLKVWDLRQMKEALKVFEGLPNYYPQTNVAFSPDEQ 431
Query: 578 IFAAGVNSE 604
I G + E
Sbjct: 432 IILTGTSVE 440
>At2g19430.1 68415.m02267 transducin family protein / WD-40 repeat
family protein similar to WD-repeat protein 5
(SP:Q9UGP9) [Homo sapiens]; contains 7 Trp-Asp WD-40
repeats
Length = 367
Score = 31.1 bits (67), Expect = 0.82
Identities = 17/60 (28%), Positives = 26/60 (43%), Gaps = 1/60 (1%)
Frame = +2
Query: 344 TKVDDTIRYL-SLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
T D+ Y + K F GH+ + T+ L+GS D T R+WD ++ C
Sbjct: 176 TAAGDSCAYCWDVESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKC 235
Score = 29.5 bits (63), Expect = 2.5
Identities = 13/55 (23%), Positives = 30/55 (54%)
Frame = +2
Query: 119 VRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSK 283
V S K+ F+ ++D ++++ + +++ SED I+DC+ G + + S+
Sbjct: 188 VESGKIKMTFKGHSDYLHTVVSRSSASQILTGSEDGTARIWDCKTGKCVKVIGSQ 242
>At2g16780.1 68415.m01924 WD-40 repeat protein (MSI2) contains 5
WD-40 repeats (PF0400); identical to WD-40 repeat
protein MSI2 (SP:O22468) [Arabidopsis thaliana] WD-40
repeats (PF0400);
Length = 415
Score = 31.1 bits (67), Expect = 0.82
Identities = 22/79 (27%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Frame = +2
Query: 272 VNSKKYGVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPV 451
V +K G ++ F +AK+ A +++ D +R + GH K+ + SP
Sbjct: 132 VGAKTSGCEVFLFDYAKHAAKSQTSECDPDLRLV------------GHDKEGYGLSWSPF 179
Query: 452 EDTFL-SGSLDKTLRLWDL 505
++ +L SGS D+ + LWD+
Sbjct: 180 KEGYLLSGSQDQKICLWDV 198
>At5g11240.1 68418.m01313 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to uncharacterized protein KIAA0007 (GI:1663708)
{Homo sapiens} 1.2e-11
Length = 615
Score = 30.7 bits (66), Expect = 1.1
Identities = 22/74 (29%), Positives = 35/74 (47%), Gaps = 1/74 (1%)
Frame = +2
Query: 290 GVDLIHFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLS 469
GV+ + + AK + I+S D + + H IR F TK V ++C+SP ++
Sbjct: 118 GVNAVS-SSAKASCIYSGG-ADGMVCQIDPHSGNLIRKFKASTKTVSSLCVSPDGKILVT 175
Query: 470 GSLD-KTLRLWDLR 508
S KT DL+
Sbjct: 176 ASTQLKTFNCSDLK 189
>At4g18900.1 68417.m02786 transducin family protein / WD-40 repeat
family protein contains 5 (4 significant) WD-40 repeats;
similar to periodic tryptophan protein 1 homolog
(Keratinocyte protein IEF SSP 9502) (PWP1)(SP:Q13610)
(PIR2:I39360) [Homo sapiens]
Length = 461
Score = 30.7 bits (66), Expect = 1.1
Identities = 44/194 (22%), Positives = 84/194 (43%), Gaps = 14/194 (7%)
Frame = +2
Query: 92 KMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMI 268
K +K+ D + K+ +T ++ ++ ++ E L+S S D +V+ D + +
Sbjct: 256 KKVKVWDVATGTCKIT--MEHHTKEVQAVAWNHYAPEVLLSGSFDQTVVLKDGRQPSHSG 313
Query: 269 TVNSKKYGVDLI----HFTHAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFP--GHTKKVV 430
S V+ + H H+ ++ T +R S+ ++ F GH +
Sbjct: 314 FKWSVMSDVESLAWDPHSEHSFVVSLEDGTVKGFDVRQASISASESNPSFTINGHDEAAT 373
Query: 431 TMCLSPVEDTFLS-GSLDKTLRLWDL--RSPNCQGL--MHLSGRPVAAYDPEG--LIFAA 589
++ + L+ GS D+T++LWDL P+C + G A+ P+ L+
Sbjct: 374 SVSYNISAPNLLATGSKDRTVKLWDLSNNEPSCIATHNPNAGGLFFIAFSPDNPFLLAMG 433
Query: 590 GVNSESIKLYDLRS 631
GV E +KL+D S
Sbjct: 434 GVMGE-LKLWDTLS 446
>At3g49180.1 68416.m05375 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
GTP-binding protein beta chain homolog, Nicotiana
tabacum, PIR:T16970
Length = 438
Score = 30.7 bits (66), Expect = 1.1
Identities = 19/76 (25%), Positives = 33/76 (43%), Gaps = 1/76 (1%)
Frame = +2
Query: 281 KKYGVDLIHFTHAKNTAIHS-STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVED 457
K Y V+ I A N + + I + K ++ + GH + V + S +
Sbjct: 74 KSYPVEPIKALAANNEGTYLVGGGISGDIYLWEVATGKLLKKWHGHYRSVTCLVFSGDDS 133
Query: 458 TFLSGSLDKTLRLWDL 505
+SGS D ++R+W L
Sbjct: 134 LLVSGSQDGSIRVWSL 149
>At2g40360.1 68415.m04977 transducin family protein / WD-40 repeat
family protein contains 4 WD-40 repeats (PF00400);
similar to block of proliferation protein Bop1
(GI:1679772) [Mus musculus]
Length = 753
Score = 30.7 bits (66), Expect = 1.1
Identities = 13/43 (30%), Positives = 23/43 (53%)
Frame = +2
Query: 392 YIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
Y+ Y GHT V ++ + SGS D ++R+W++ + C
Sbjct: 416 YLEY-KGHTGAVTSISTDSSGEWIASGSTDGSVRMWEVETGRC 457
>At2g26490.1 68415.m03178 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
related to En/Spm transposon family of maize
Length = 465
Score = 30.7 bits (66), Expect = 1.1
Identities = 17/53 (32%), Positives = 26/53 (49%)
Frame = +2
Query: 341 STKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
S D TI+ + D+K + P H V ++ +S E SGS D T++ W
Sbjct: 223 SASWDRTIKVWRIADSKCLESIPAHDDAVNSV-VSTTEAIVFSGSADGTVKAW 274
>At5g56190.2 68418.m07011 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 447
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAA----YDPEGL 577
GH P TF +G+ DKT R+WD R + + + L G A + +G
Sbjct: 317 GHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLS-ESVAVLKGNLGAVRSIRFTSDGR 375
Query: 578 IFAAGVNSESIKLYDLRS 631
A ++ + +YD +S
Sbjct: 376 YVAMAEPADFVHIYDTKS 393
>At5g56190.1 68418.m07010 WD-40 repeat family protein contains 3 (2
significant) WD-40 repeats (PF0400); similar to beta
transducin-like protein HET-E2C*40 (GI:17225208)
[Podospora anserina]
Length = 441
Score = 30.3 bits (65), Expect = 1.4
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVAA----YDPEGL 577
GH P TF +G+ DKT R+WD R + + + L G A + +G
Sbjct: 311 GHLDYSFASAWHPNGVTFATGNQDKTCRIWDTRKLS-ESVAVLKGNLGAVRSIRFTSDGR 369
Query: 578 IFAAGVNSESIKLYDLRS 631
A ++ + +YD +S
Sbjct: 370 YVAMAEPADFVHIYDTKS 387
>At1g20540.1 68414.m02559 transducin family protein / WD-40 repeat
family protein contains 6 WD-40 repeats (PF00400);
similar to Rbap46 polypeptide (GI:9454362) [Gallus
gallus]
Length = 351
Score = 30.3 bits (65), Expect = 1.4
Identities = 19/64 (29%), Positives = 32/64 (50%), Gaps = 1/64 (1%)
Frame = +2
Query: 452 EDTFLSGSLDKTLRLWDLRSPNCQGLMH-LSGRPVAAYDPEGLIFAAGVNSESIKLYDLR 628
E SLD + + ++ S + G++H LSG A+DP + A S++ +DLR
Sbjct: 142 EQNIFLWSLDCSKKSAEVLSKDSAGMLHSLSG---GAWDPHDVNAVAATGESSVQFWDLR 198
Query: 629 SFDK 640
+ K
Sbjct: 199 TMKK 202
>At5g64630.3 68418.m08123 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 428
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGT 259
+S+KV K + + + +SP+ LIS S D+ +I+D KG+
Sbjct: 41 QSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGS 86
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 413 HTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFA 586
H K V+ + SP + +SGS+D + +WD+ + ++ H A+DP A
Sbjct: 52 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVA 111
Query: 587 AGVNSESIKLY 619
+ + + ++Y
Sbjct: 112 SLSSDRTCRIY 122
>At5g64630.2 68418.m08122 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 487
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGT 259
+S+KV K + + + +SP+ LIS S D+ +I+D KG+
Sbjct: 100 QSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGS 145
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 413 HTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFA 586
H K V+ + SP + +SGS+D + +WD+ + ++ H A+DP A
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVA 170
Query: 587 AGVNSESIKLY 619
+ + + ++Y
Sbjct: 171 SLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDC--EKGTQMITVNSKK--YGVDLIHFTHAKNTAI 334
+N+I FSP+GE L S ++ ++ I+ + Q V+ + D++ + + A
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 335 HSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
S VD++ ++ + H V + P+ S S D+T R++
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g64630.1 68418.m08121 transducin family protein / WD-40 repeat
family protein Similar to (SP:Q13112) Chromatin assembly
factor 1 subunit B (CAF-1 subunit B) (CAF-Ip60) [Homo
sapiens]
Length = 397
Score = 29.9 bits (64), Expect = 1.9
Identities = 15/46 (32%), Positives = 26/46 (56%)
Frame = +2
Query: 122 RSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGT 259
+S+KV K + + + +SP+ LIS S D+ +I+D KG+
Sbjct: 100 QSWKVHKSLSFHRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGS 145
Score = 29.9 bits (64), Expect = 1.9
Identities = 17/71 (23%), Positives = 34/71 (47%), Gaps = 2/71 (2%)
Frame = +2
Query: 413 HTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLM--HLSGRPVAAYDPEGLIFA 586
H K V+ + SP + +SGS+D + +WD+ + ++ H A+DP A
Sbjct: 111 HRKDVLDLQWSPDDAYLISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVA 170
Query: 587 AGVNSESIKLY 619
+ + + ++Y
Sbjct: 171 SLSSDRTCRIY 181
Score = 28.3 bits (60), Expect = 5.8
Identities = 25/115 (21%), Positives = 50/115 (43%), Gaps = 4/115 (3%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDC--EKGTQMITVNSKK--YGVDLIHFTHAKNTAI 334
+N+I FSP+GE L S ++ ++ I+ + Q V+ + D++ + + A
Sbjct: 67 VNTIRFSPSGELLASGADGGELFIWKLHPSETNQSWKVHKSLSFHRKDVLDLQWSPDDAY 126
Query: 335 HSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
S VD++ ++ + H V + P+ S S D+T R++
Sbjct: 127 LISGSVDNSCIIWDVNKGSVHQILDAHCHYVQGVAWDPLAKYVASLSSDRTCRIY 181
>At5g19920.1 68418.m02370 transducin family protein / WD-40 repeat
family protein contains 5 WD-40 repeats (PF00400);
related to TipD protein (SP:O15736, PIR:T08602)
[Dictyostelium discoideum]; related to WD-repeat protein
RBAP1 (GI:9716495) [Zea mays]
Length = 656
Score = 29.9 bits (64), Expect = 1.9
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 9/92 (9%)
Frame = +2
Query: 476 LDKTLRLWDLRSPNCQ----GLMHLSGRPVAA-----YDPEGLIFAAGVNSESIKLYDLR 628
LD+ LRL+D+R P + G S +A + P+GL ++G I ++D+R
Sbjct: 553 LDRQLRLYDVRLPQTELFSFGWKQESSESQSALINQSWSPDGLHISSGSADPVIHIFDIR 612
Query: 629 SFDKGPFVTFKLNQEKGM*LDRF*NFPVMAKL 724
P ++ K ++++ + ++P++ +
Sbjct: 613 YNAPSPSLSMKAHKKRVFKAEWHSSYPLLVSI 644
>At4g32990.1 68417.m04692 transducin family protein / WD-40 repeat
family protein HIRA protein, Drosophila melanogaster,
PID:e1250847
Length = 318
Score = 29.9 bits (64), Expect = 1.9
Identities = 13/40 (32%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +2
Query: 395 IRYFPGHTKKVVTMCLSPVEDTFLSG-SLDKTLRLWDLRS 511
++ GHT +V + +P D ++ S DKT+R+W+ S
Sbjct: 13 VQKLEGHTDRVWNVAWNPAADGVIASCSADKTVRIWEQSS 52
>At1g55680.1 68414.m06374 WD-40 repeat family protein contains 2 (1
significant) WD-40 repeats (PF0400); similar to Trp-Asp
repeat protein (PIR:T40094) [Schizosaccharomyces]
Length = 445
Score = 29.9 bits (64), Expect = 1.9
Identities = 22/83 (26%), Positives = 37/83 (44%), Gaps = 4/83 (4%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVA---- 556
K + GH P TF +G+ DKT R+WD+R+ + + + L G A
Sbjct: 308 KTLATLSGHLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLS-KSVAVLRGNLGAIRSI 366
Query: 557 AYDPEGLIFAAGVNSESIKLYDL 625
Y +G A ++ + +YD+
Sbjct: 367 RYTSDGKYMAMAEPADFVHVYDV 389
Score = 27.9 bits (59), Expect = 7.6
Identities = 10/36 (27%), Positives = 21/36 (58%)
Frame = +2
Query: 533 HLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
HL +A+ P+G F+ G ++ +++D+R+ K
Sbjct: 316 HLDFSFASAWHPDGFTFSTGNQDKTCRVWDIRNLSK 351
>At1g49450.1 68414.m05543 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 471
Score = 29.9 bits (64), Expect = 1.9
Identities = 16/30 (53%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 437 CLSPVEDTFL--SGSLDKTLRLWDLRSPNC 520
CLS ED L SGS DKTL++W L C
Sbjct: 250 CLSLNEDLGLLYSGSWDKTLKVWRLSDSKC 279
>At1g30370.1 68414.m03713 lipase class 3 family protein similar to
DEFECTIVE IN ANTHER DEHISCENCE1 [Arabidopsis thaliana]
GI:16215706; contains Pfam profile: PF01764: Lipase
Length = 529
Score = 29.9 bits (64), Expect = 1.9
Identities = 20/70 (28%), Positives = 37/70 (52%)
Frame = +3
Query: 114 KLSEALKLPKYSVKIQTKLTV*IFLLMGRH*FHVAKMIKSLYTIVKKEHK*LRSTVKNTG 293
+L + LKL S+KI+ K + FL +H FH+ K K + + + + + +T
Sbjct: 23 RLKQKLKLAWKSIKIRVKSHLPGFLSTKKHLFHI-KSRKEEQDLSQVAQRICKISNDSTK 81
Query: 294 SI*YILHMPK 323
S+ ++L +PK
Sbjct: 82 SLAFLLQLPK 91
>At4g11110.1 68417.m01803 WD-40 repeat family protein / phytochrome
A-related contains 7 WD-40 repeats (PF00400); similar to
phytochrome A supressor spa1 (GI:4809171) [Arabidopsis
thaliana]; contains non-consensus (GC) donor splice sites
at introns 4 and 6
Length = 1017
Score = 29.5 bits (63), Expect = 2.5
Identities = 31/129 (24%), Positives = 55/129 (42%), Gaps = 1/129 (0%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGET-LISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAK 322
F E+ + S+DFS T L S S+D + +++ + + T+ + V + F+
Sbjct: 792 FIEHEKRAWSVDFSEACPTKLASGSDDCSVKLWNINERNCLGTIRNIA-NVCCVQFSPQS 850
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
+ + + T Y + GH K V+ +T ++ S D TL+LWD
Sbjct: 851 SHLLAFGSSDFRTYCYDLRNLRTPWCILSGHNK-AVSYAKFLDNETLVTASTDNTLKLWD 909
Query: 503 LRSPNCQGL 529
L+ GL
Sbjct: 910 LKKTTHGGL 918
>At3g10530.1 68416.m01264 transducin family protein / WD-40 repeat
family protein contains 2 WD-40 repeats (PF00400); BING4
(gi:3811380) {Mus musculus]; similar to hypothetical
protein GB:P40055 [Saccharomyces cerevisiae]
Length = 536
Score = 29.5 bits (63), Expect = 2.5
Identities = 23/109 (21%), Positives = 40/109 (36%), Gaps = 2/109 (1%)
Frame = +2
Query: 320 KNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLW 499
KN + +S + + Y + + + M ++P G T+ +W
Sbjct: 207 KNHFLLASVNMSGQLHYQDVTHGGMVASIRTGKGRTDVMEVNPYNSVVGLGHSGGTVTMW 266
Query: 500 DLRS--PNCQGLMHLSGRPVAAYDPEGLIFAAGVNSESIKLYDLRSFDK 640
S P Q H A+ P G + A IK++DLR F++
Sbjct: 267 KPTSQAPLVQMQCHPGPVSSVAFHPNGHLMATSGKERKIKIWDLRKFEE 315
Score = 29.1 bits (62), Expect = 3.3
Identities = 11/38 (28%), Positives = 24/38 (63%)
Frame = +2
Query: 167 INSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNS 280
++S+ F PNG + + ++ +I I+D K ++ T++S
Sbjct: 284 VSSVAFHPNGHLMATSGKERKIKIWDLRKFEEVQTIHS 321
>At4g23260.1 68417.m03353 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 579
Score = 29.1 bits (62), Expect = 3.3
Identities = 19/77 (24%), Positives = 34/77 (44%), Gaps = 4/77 (5%)
Frame = +2
Query: 407 PGHTKKVVTMCLSPVEDTFLSGSLDKT-LRLWDLRSPNCQGLMHLSGRP---VAAYDPEG 574
PG + V ++C+ ++ L LD+ W C L+ + RP + DP G
Sbjct: 4 PGSERDVCSLCIRSTSESLLQSCLDQADAFFWSGEETLC--LVRYANRPFSGLLVMDPLG 61
Query: 575 LIFAAGVNSESIKLYDL 625
IF G + + ++D+
Sbjct: 62 AIFNTGELNTNQTVFDI 78
>At4g29860.1 68417.m04250 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400); WDVCF
variant 1 (gi:12006981) [Mus musculus]
Length = 386
Score = 28.7 bits (61), Expect = 4.4
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLWD 502
GH V+ + P + +GS D LR+WD
Sbjct: 15 GHRHSVMDVSFHPSKSLLFTGSADGELRIWD 45
Score = 27.9 bits (59), Expect = 7.6
Identities = 27/124 (21%), Positives = 53/124 (42%), Gaps = 3/124 (2%)
Frame = +2
Query: 155 NTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDL--IHFTHAK-N 325
+++ + S+ + + + IS DD+IV+Y+ T T+ K+ ++ + T + +
Sbjct: 261 HSEPVLSLSVASSCDGGISGGADDKIVMYNLNHSTGSCTIR-KEITLERPGVSGTSIRVD 319
Query: 326 TAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDL 505
I ++ D IR + + H + SP + S S D T+ LW L
Sbjct: 320 GKIAATAGWDHRIRVYNYRKGNALAILKYHRATCNAVSYSPDCELMASASEDATVALWKL 379
Query: 506 RSPN 517
P+
Sbjct: 380 YPPH 383
>At2g19920.1 68415.m06036 RNA-dependent RNA polymerase family
protein contains Pfam domain, PF05183: RNA dependent RNA
polymerase
Length = 927
Score = 28.7 bits (61), Expect = 4.4
Identities = 12/48 (25%), Positives = 26/48 (54%)
Frame = +2
Query: 110 DQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEK 253
++ +S + + + D N+ D +P+G + + C ED+ + +D EK
Sbjct: 818 NKTFKSTSILGLIFDTVDFHNAEDTTPSGISKLQCFEDEPVSEFDMEK 865
>At1g78070.2 68414.m09098 WD-40 repeat family protein contains Pfam
profile PF00400: WD domain, G-beta repeat
Length = 447
Score = 28.7 bits (61), Expect = 4.4
Identities = 22/82 (26%), Positives = 34/82 (41%), Gaps = 4/82 (4%)
Frame = +2
Query: 389 KYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMHLSGRPVA---- 556
K I GH + P +G+ D T RLWD+R+ + Q L L G A
Sbjct: 310 KVIHGLEGHLDYSFSSAWHPNGQILATGNQDTTCRLWDVRNLS-QSLKVLKGNMGAIRAL 368
Query: 557 AYDPEGLIFAAGVNSESIKLYD 622
+ +G A ++ + L+D
Sbjct: 369 RFTSDGRFLAMAEPADFVHLFD 390
>At5g63570.1 68418.m07979 glutamate-1-semialdehyde 2,1-aminomutase 1
(GSA 1) / glutamate-1-semialdehyde aminotransferase 1
(GSA-AT 1) identical to GSA 1 [SP|P42799]
Length = 474
Score = 28.3 bits (60), Expect = 5.8
Identities = 19/68 (27%), Positives = 29/68 (42%)
Frame = +2
Query: 86 CIKMMKLVDQVVRSFKVAKVFRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQM 265
CIKM VD+ +SF + K N + N S Q V+ D KG++M
Sbjct: 34 CIKMSVSVDEKKKSFSLQKSEEAFNAAKNLMPGGVNSPVRAFKSVGGQPVLIDSVKGSKM 93
Query: 266 ITVNSKKY 289
++ +Y
Sbjct: 94 WDIDGNEY 101
>At3g51930.1 68416.m05696 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
myosin heavy chain kinase B (SP:P90648)(GI:1903458)
[Dictyostelium discoideum]
Length = 415
Score = 28.3 bits (60), Expect = 5.8
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Frame = +2
Query: 410 GHTKKVVTMCLSPVEDTFLSGSLDKTLRLW--DLRSPNCQ-GLMHLSGRPV 553
GH V+ MC+ V + SGS DK++ LW ++ C+ G++H PV
Sbjct: 316 GHNMAVLCMCV--VGEMVCSGSADKSIGLWRREVTGMLCKFGVIHGHEGPV 364
>At3g18950.1 68416.m02405 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400);
similar to En/Spm-like transposon protein GI:2739374
from [Arabidopsis thaliana]; no characterized homologs
Length = 473
Score = 28.3 bits (60), Expect = 5.8
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)
Frame = +2
Query: 437 CLSPVEDTFL--SGSLDKTLRLWDLRSPNC 520
CLS E+ L SGS DKTL++W L C
Sbjct: 254 CLSLNEELGLLYSGSWDKTLKVWRLSDSKC 283
>At2g02650.1 68415.m00204 reverse transcriptase-related similar to
reverse transcriptase [Arabidopsis thaliana] GI:976278
Length = 365
Score = 28.3 bits (60), Expect = 5.8
Identities = 16/47 (34%), Positives = 27/47 (57%)
Frame = +2
Query: 380 HDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNC 520
H +Y+ +F +K +VT+ ++ ED L G+L +R W L+ P C
Sbjct: 274 HGLRYV-WFESDSKSLVTL-INNGEDHSLLGTLIYDIRHWMLKLPYC 318
>At1g80710.1 68414.m09470 transducin family protein / WD-40 repeat
family protein contains 3 WD-40 repeats (PF00400);
similar to damage-specific DNA-binding protein 2 (DDB2)
[Mus musculus]
Length = 516
Score = 28.3 bits (60), Expect = 5.8
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 11/159 (6%)
Frame = +2
Query: 143 VFRENTDKINSIDFSPNG-ETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHA 319
+F ++ ++SI F N +IS S D I + D EK +V Y D F+ +
Sbjct: 258 LFTPHSAPVSSIVFQQNSLSRVISSSYDGLIRLMDVEK-----SVFDLVYSTDEAIFSLS 312
Query: 320 KNTAIHSSTKVDDTIRYLSLHD---NKYIRYFPGHTKKVVTMCLSPVEDTFLS-GSLDKT 487
+ S ++ D K + ++ H +++ ++ +P ++ S D T
Sbjct: 313 QRPNDEQSLYFGQDYGVFNVWDLRAGKSVFHWELHERRINSIDFNPQNPHVMATSSTDGT 372
Query: 488 LRLWDLRSPNCQGLMHLS----GRPV--AAYDPEGLIFA 586
LWDLRS + LS R V A + P GL A
Sbjct: 373 ACLWDLRSMGAKKPKTLSTVNHSRAVHSAYFSPSGLSLA 411
>At1g65180.1 68414.m07390 DC1 domain-containing protein contains
Pfam profile PF03107: DC1 domain
Length = 653
Score = 28.3 bits (60), Expect = 5.8
Identities = 14/61 (22%), Positives = 28/61 (45%)
Frame = +2
Query: 146 FRENTDKINSIDFSPNGETLISCSEDDQIVIYDCEKGTQMITVNSKKYGVDLIHFTHAKN 325
F +N D ++ + T +C + Y C + V+ +KYG ++ H +H+ +
Sbjct: 120 FPQNHDHKLKLEMVRSSFTCFTCGKGGSGYPYKCHECDLAFHVDCEKYGAEVNHPSHSLH 179
Query: 326 T 328
T
Sbjct: 180 T 180
>At1g27840.1 68414.m03412 transducin family protein / WD-40 repeat
family protein contains similarity to cockayne syndrome
complementation group A protein GB:U28413 GI:975301 from
[Homo sapiens]; confirmed by cDNA gi:1598289
Length = 450
Score = 28.3 bits (60), Expect = 5.8
Identities = 17/67 (25%), Positives = 30/67 (44%), Gaps = 1/67 (1%)
Frame = +2
Query: 323 NTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFL-SGSLDKTLRLW 499
+T I + T+ D +R + + GH V+++ S + L +G D +R W
Sbjct: 160 HTLIAAGTE-DVQVRLCDIASGAFSHTLSGHRDGVMSVEWSTSSEWVLYTGGCDGAIRFW 218
Query: 500 DLRSPNC 520
D+R C
Sbjct: 219 DIRRAGC 225
>At4g07410.1 68417.m01136 transducin family protein / WD-40 repeat
family protein contains 7 WD-40 repeats (PF00400) (2
weak); similar to Vegetatible incompatibility protein
HET-E-1 (SP:Q00808) {Podospora anserina}
Length = 815
Score = 27.9 bits (59), Expect = 7.6
Identities = 15/49 (30%), Positives = 22/49 (44%)
Frame = +2
Query: 365 RYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRS 511
R +L Y R P + + +++ SP SGS D +R WD S
Sbjct: 181 RISNLEKLTYYRSLPRVSGRALSVTWSPDAKRIFSGSSDGLIRCWDATS 229
>At3g54250.1 68416.m05996 mevalonate diphosphate decarboxylase,
putative similar to mevalonate diphosphate decarboxylase
[Arabidopsis thaliana] gi|2288887|emb|CAA74700
Length = 419
Score = 27.9 bits (59), Expect = 7.6
Identities = 21/72 (29%), Positives = 30/72 (41%)
Frame = +2
Query: 356 DTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLRLWDLRSPNCQGLMH 535
D +R L ++D+ + P H V T+ +SP D K + L R NC L
Sbjct: 28 DEVRILPVNDSISVTLDPDHLCTVTTVAVSPAFDRDRMWLNGKEISLSGSRYQNC--LRE 85
Query: 536 LSGRPVAAYDPE 571
+ GR D E
Sbjct: 86 IRGRAGDVEDME 97
>At1g80490.2 68414.m09430 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
H ++ I + D TI+ ++ ++ GH+K++ + S V + +S D L
Sbjct: 874 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 933
Query: 494 LWD 502
+W+
Sbjct: 934 VWN 936
>At1g80490.1 68414.m09429 WD-40 repeat family protein contains 9 WD-40
repeats domain (PF00400) (6 weak)
Length = 1120
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
H ++ I + D TI+ ++ ++ GH+K++ + S V + +S D L
Sbjct: 874 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 933
Query: 494 LWD 502
+W+
Sbjct: 934 VWN 936
>At1g15750.2 68414.m01890 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
H ++ I + D TI+ ++ ++ GH+K++ + S V + +S D L
Sbjct: 885 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 944
Query: 494 LWD 502
+W+
Sbjct: 945 VWN 947
>At1g15750.1 68414.m01889 WD-40 repeat family protein contains 10
WD-40 repeats (PF00400) (1 weak)
Length = 1131
Score = 27.9 bits (59), Expect = 7.6
Identities = 14/63 (22%), Positives = 30/63 (47%)
Frame = +2
Query: 314 HAKNTAIHSSTKVDDTIRYLSLHDNKYIRYFPGHTKKVVTMCLSPVEDTFLSGSLDKTLR 493
H ++ I + D TI+ ++ ++ GH+K++ + S V + +S D L
Sbjct: 885 HPQDNNIIAIGMDDSTIQIYNVRVDEVKSKLKGHSKRITGLAFSNVLNVLVSSGADAQLC 944
Query: 494 LWD 502
+W+
Sbjct: 945 VWN 947
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,692,717
Number of Sequences: 28952
Number of extensions: 363152
Number of successful extensions: 1535
Number of sequences better than 10.0: 177
Number of HSP's better than 10.0 without gapping: 1055
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1418
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1663169840
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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