Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0085
         (601 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL589733-1|CAI12327.1|  384|Homo sapiens kinesin family member 2...    30   5.4  
AB012723-1|BAA36418.1|  384|Homo sapiens kinesin-like protein pr...    30   5.4  
AB012722-1|BAA36417.1|  384|Homo sapiens kinesin-like protein pr...    30   5.4  

>AL589733-1|CAI12327.1|  384|Homo sapiens kinesin family member 25
           protein.
          Length = 384

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +1

Query: 265 LLSKALGVDFILIVIICVNVSPKYGXDXLINLGYCLRSLVSTFLQRTPAXRE 420
           LL   LG D  L+VI+C++ S ++    L  LG+ +R   +  +QR PA ++
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPARKK 371


>AB012723-1|BAA36418.1|  384|Homo sapiens kinesin-like protein
           protein.
          Length = 384

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +1

Query: 265 LLSKALGVDFILIVIICVNVSPKYGXDXLINLGYCLRSLVSTFLQRTPAXRE 420
           LL   LG D  L+VI+C++ S ++    L  LG+ +R   +  +QR PA ++
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPARKK 371


>AB012722-1|BAA36417.1|  384|Homo sapiens kinesin-like protein
           protein.
          Length = 384

 Score = 30.3 bits (65), Expect = 5.4
 Identities = 18/52 (34%), Positives = 30/52 (57%)
 Frame = +1

Query: 265 LLSKALGVDFILIVIICVNVSPKYGXDXLINLGYCLRSLVSTFLQRTPAXRE 420
           LL   LG D  L+VI+C++ S ++    L  LG+ +R   +  +QR PA ++
Sbjct: 323 LLQDCLGGDAKLLVILCISPSQRHLAQTLQGLGFGIR---ARQVQRGPARKK 371


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 65,099,009
Number of Sequences: 237096
Number of extensions: 1024946
Number of successful extensions: 1501
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1477
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1501
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)