Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0081
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock p...    44   5e-06
AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione S-tran...    23   7.6  

>AF283275-1|AAG15376.1|  133|Anopheles gambiae small heat shock
           protein protein.
          Length = 133

 Score = 44.0 bits (99), Expect = 5e-06
 Identities = 18/46 (39%), Positives = 30/46 (65%)
 Frame = +2

Query: 239 KLEXNMNVKRFXPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFV 376
           K + N++V++F P+EI V   +  + VEGKH+E  D   +++ HFV
Sbjct: 14  KFQINLDVQQFSPEEISVKYVDNCVLVEGKHEEKQDDHGYVSRHFV 59



 Score = 29.5 bits (63), Expect = 0.12
 Identities = 12/43 (27%), Positives = 22/43 (51%)
 Frame = +3

Query: 381 RFVXPPGSKQEEXRAIYKENGILTVXVPKHELXXXXXXRLVPI 509
           R++ P G  + +  +    +GILT+  P+ E+      R +PI
Sbjct: 61  RYMLPKGHNEADIVSSLSSDGILTITCPRKEIEQKNEERSIPI 103


>AF316638-1|AAG45166.1|  211|Anopheles gambiae glutathione
           S-transferase D12 protein.
          Length = 211

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/35 (31%), Positives = 18/35 (51%)
 Frame = -3

Query: 373 EMIRQELLYVAGFLMLSFDRDVFVFHCYFDLIRXE 269
           EM   +  YVAG  +   D  +FV  C  D+++ +
Sbjct: 136 EMYLTDSPYVAGQKLTIADFSIFVSFCSLDMMKYD 170


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 568,475
Number of Sequences: 2352
Number of extensions: 8969
Number of successful extensions: 11
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)