Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0081
(750 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock prot... 44 1e-04
U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock prot... 44 1e-04
Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical pr... 38 0.010
M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein ( C.ele... 37 0.013
K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock prot... 37 0.013
AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock pr... 37 0.013
U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock prot... 36 0.023
U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock prot... 36 0.031
U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock prot... 36 0.031
K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock prot... 36 0.031
Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical pr... 32 0.38
Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical pr... 32 0.50
AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical ... 30 1.5
K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock prot... 29 2.7
M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein ( C.ele... 29 4.7
X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal frag... 28 6.2
U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock prot... 28 6.2
U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock prot... 28 6.2
K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock prot... 28 6.2
>U41109-5|AAB37035.1| 149|Caenorhabditis elegans Heat shock protein
protein 17,isoform a protein.
Length = 149
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +2
Query: 221 IIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVHEIRXTAR 400
++ ND + +++V +F P+E+KV + + + +EGKH E D + HFV +
Sbjct: 50 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 109
Query: 401 XQTGRXASDL 430
+ + S+L
Sbjct: 110 VRPEQIKSEL 119
>U41109-4|AAQ62453.1| 148|Caenorhabditis elegans Heat shock protein
protein 17,isoform b protein.
Length = 148
Score = 44.0 bits (99), Expect = 1e-04
Identities = 19/70 (27%), Positives = 37/70 (52%)
Frame = +2
Query: 221 IIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVHEIRXTAR 400
++ ND + +++V +F P+E+KV + + + +EGKH E D + HFV +
Sbjct: 49 VVNNDQEYNVSVDVSQFEPEELKVNIVDNQLIIEGKHNEKTDKYGQVERHFVRKYNLPTG 108
Query: 401 XQTGRXASDL 430
+ + S+L
Sbjct: 109 VRPEQIKSEL 118
>Z77657-3|CAB01147.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.4 protein.
Length = 147
Score = 37.5 bits (83), Expect = 0.010
Identities = 12/38 (31%), Positives = 27/38 (71%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKH 331
+I+ ++ K N+NV F P+E+KV ++ + ++++G+H
Sbjct: 44 EIMNSNDKFAVNLNVSNFKPEELKVNLEGRQLSIQGEH 81
>M14334-2|AAA28071.1| 145|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 145
Score = 37.1 bits (82), Expect = 0.013
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
+I+ ND K N+NV +F P+++K+ + + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQE 80
>K03273-1|AAA28066.1| 146|Caenorhabditis elegans heat shock protein
16-1 protein.
Length = 146
Score = 37.1 bits (82), Expect = 0.013
Identities = 12/39 (30%), Positives = 26/39 (66%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
QI+ ND K N+NV +F P+++K+ + ++++G+ +
Sbjct: 43 QIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 81
>AC006774-1|AAF60615.1| 145|Caenorhabditis elegans Heat shock
protein protein 16.2 protein.
Length = 145
Score = 37.1 bits (82), Expect = 0.013
Identities = 11/39 (28%), Positives = 27/39 (69%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
+I+ ND K N+NV +F P+++K+ + + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGRTLSIQGEQE 80
>U39645-6|AAA80366.1| 368|Caenorhabditis elegans Heat shock protein
protein 43 protein.
Length = 368
Score = 36.3 bits (80), Expect = 0.023
Identities = 14/54 (25%), Positives = 31/54 (57%)
Frame = +2
Query: 221 IIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHKEAGDIKKFLTNHFVHE 382
++ +D + +M+ +F P+EI+V + + +EG+H++ D F +FV +
Sbjct: 107 VVNDDRRFAVDMDCYQFRPEEIQVKTLDDTLMIEGRHEDIRDKDNFTKMYFVRK 160
>U64837-8|AAB04842.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.11 protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.031
Identities = 11/39 (28%), Positives = 26/39 (66%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
+I+ ND K N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>U64837-5|AAB04839.1| 145|Caenorhabditis elegans Heat shock protein
protein 16.1 protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.031
Identities = 11/39 (28%), Positives = 26/39 (66%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
+I+ ND K N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>K03273-4|AAA28068.1| 145|Caenorhabditis elegans heat shock protein
16-1a protein.
Length = 145
Score = 35.9 bits (79), Expect = 0.031
Identities = 11/39 (28%), Positives = 26/39 (66%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHK 334
+I+ ND K N+NV +F P+++K+ + ++++G+ +
Sbjct: 42 EIVNNDQKFAINLNVSQFKPEDLKINLDGHTLSIQGEQE 80
>Z77657-2|CAB01146.1| 147|Caenorhabditis elegans Hypothetical
protein F08H9.3 protein.
Length = 147
Score = 32.3 bits (70), Expect = 0.38
Identities = 10/40 (25%), Positives = 25/40 (62%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEGKHKE 337
+I+ K N+NV P+E+K+ ++ + ++++ +H+E
Sbjct: 43 EIVDTHEKFSVNLNVPDVKPEELKINLEGRKLSIKAEHQE 82
>Z35640-2|CAA84703.1| 159|Caenorhabditis elegans Hypothetical
protein F43D9.4 protein.
Length = 159
Score = 31.9 bits (69), Expect = 0.50
Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 3/43 (6%)
Frame = +2
Query: 254 MNVKRFXPDEIKVTVKNKYITVEGKHK---EAGDIKKFLTNHF 373
++V F P+E+KV ++ +T+EG H+ E G K+ T F
Sbjct: 57 LDVAAFKPEELKVNLEGHVLTIEGHHEVKTEHGFSKRSFTRQF 99
>AC024830-3|AAF59604.3| 180|Caenorhabditis elegans Hypothetical
protein Y55F3BR.6 protein.
Length = 180
Score = 30.3 bits (65), Expect = 1.5
Identities = 13/31 (41%), Positives = 19/31 (61%)
Frame = +2
Query: 254 MNVKRFXPDEIKVTVKNKYITVEGKHKEAGD 346
++V ++ D +KVTV + I VEG H E D
Sbjct: 85 LDVSKYDADSLKVTVVDNNIIVEGSHGEKED 115
>K03273-3|AAA28067.1| 144|Caenorhabditis elegans heat shock protein
16-48a protein.
Length = 144
Score = 29.5 bits (63), Expect = 2.7
Identities = 9/36 (25%), Positives = 22/36 (61%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
QI+ ++ K ++V F P+++K+ + + + +EG
Sbjct: 47 QIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 82
>M14334-1|AAA28070.1| 144|Caenorhabditis elegans protein (
C.elegans heat shockprotein genes 16-41 and 16-2,
complete cds, flanked byCeRep16 repetitive elements. ).
Length = 144
Score = 28.7 bits (61), Expect = 4.7
Identities = 9/36 (25%), Positives = 21/36 (58%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
QI+ ++ K ++V F P+ +K+ + + + +EG
Sbjct: 47 QIVNDESKFSVQLDVSHFKPENLKIKLDGRELKIEG 82
>X01576-1|CAA25731.1| 135|Caenorhabditis elegans C-terminal
fragment of hsp 16-48 protein.
Length = 135
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/36 (22%), Positives = 22/36 (61%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
+I+ ++ K ++V F P+++K+ + + + +EG
Sbjct: 38 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 73
>U64837-7|AAB04841.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.49 protein.
Length = 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/36 (22%), Positives = 22/36 (61%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
+I+ ++ K ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>U64837-6|AAB04840.1| 143|Caenorhabditis elegans Heat shock protein
protein 16.48 protein.
Length = 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/36 (22%), Positives = 22/36 (61%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
+I+ ++ K ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
>K03273-2|AAA28069.1| 143|Caenorhabditis elegans heat shock protein
16-48 protein.
Length = 143
Score = 28.3 bits (60), Expect = 6.2
Identities = 8/36 (22%), Positives = 22/36 (61%)
Frame = +2
Query: 218 QIIANDXKLEXNMNVKRFXPDEIKVTVKNKYITVEG 325
+I+ ++ K ++V F P+++K+ + + + +EG
Sbjct: 46 EIVNDESKFSVQLDVSHFKPEDLKIELDGRELKIEG 81
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,385,482
Number of Sequences: 27780
Number of extensions: 198654
Number of successful extensions: 359
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 348
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 359
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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