Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0077
         (519 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxida...    37   9e-05
AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less prot...    23   1.6  
AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.            22   2.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   2.8  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    22   3.7  
AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esteras...    21   5.0  
AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esteras...    21   6.5  
X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.          21   8.7  
AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.           21   8.7  

>AY884063-1|AAX84204.1|  682|Tribolium castaneum pro-phenol oxidase
           subunit 1 protein.
          Length = 682

 Score = 37.1 bits (82), Expect = 9e-05
 Identities = 26/90 (28%), Positives = 40/90 (44%), Gaps = 7/90 (7%)
 Frame = +2

Query: 41  GFPQRLMLPLGTIGGLEMQMYVIVSPVRTGMLLPTLDMTMMKDRCACRWSSCI--STMPL 214
           G+PQ ++LP GT  G    ++V++S      +      T       C     +      +
Sbjct: 580 GWPQHMLLPKGTEAGYPCHLFVMISNYADDRVEQDTSGTCSDGDTFCGIKDKLYPDRRSM 639

Query: 215 GYPFDR-PID----MASFFTSNMKFADVMI 289
           GYPFDR P D    +  F T NM+  +V+I
Sbjct: 640 GYPFDRMPRDGVDTLQQFLTPNMRVQEVVI 669


>AF317551-1|AAG39634.1|  312|Tribolium castaneum distal-less
           protein.
          Length = 312

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 9/23 (39%), Positives = 11/23 (47%)
 Frame = -3

Query: 175 TTVLHHGHVQCGQEHTGADRRHD 107
           T+  HH +   G  HTG    HD
Sbjct: 39  TSYQHHFNSPAGNAHTGPTGTHD 61


>AF321227-6|AAK16426.1|  150|Tribolium castaneum Pb protein.
          Length = 150

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 200 STMPLGYPFDRPIDMAS 250
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 22.2 bits (45), Expect = 2.8
 Identities = 9/17 (52%), Positives = 10/17 (58%)
 Frame = +2

Query: 200 STMPLGYPFDRPIDMAS 250
           +T P GYP D P  M S
Sbjct: 91  NTPPAGYPMDVPHGMGS 107


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 9/25 (36%), Positives = 13/25 (52%)
 Frame = -2

Query: 188 SSDKHNGPSSWSCPMWARAYRCGPA 114
           S  ++ G ++  CP    A R GPA
Sbjct: 281 SQRRYTGRATCDCPNCQEAERLGPA 305


>AJ850292-1|CAH64512.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.4 bits (43), Expect = 5.0
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 332 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXXHDIV 457
           D  + V  K    YL    L K+T++D+          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKKTFRDLVAMFSDRIFINDIV 402


>AJ850293-1|CAH64513.1|  539|Tribolium castaneum putative esterase
           protein.
          Length = 539

 Score = 21.0 bits (42), Expect = 6.5
 Identities = 12/42 (28%), Positives = 18/42 (42%)
 Frame = +2

Query: 332 DTSEMVMMKDDLTYLDSDMLVKRTYKDVXXXXXXXXXXHDIV 457
           D  + V  K    YL    L KRT++++          +DIV
Sbjct: 361 DLQDEVSQKIRKYYLGEKKLSKRTFRELVAMFSDRIFINDIV 402


>X97819-1|CAA66399.1|  251|Tribolium castaneum ZEN Tc protein.
          Length = 251

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 167 PSSWSCPMW 141
           PS W+CP +
Sbjct: 49  PSDWNCPQY 57


>AF321227-4|AAK16424.1|  246|Tribolium castaneum Zen protein.
          Length = 246

 Score = 20.6 bits (41), Expect = 8.7
 Identities = 5/9 (55%), Positives = 7/9 (77%)
 Frame = -2

Query: 167 PSSWSCPMW 141
           PS W+CP +
Sbjct: 40  PSDWNCPQY 48


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 104,789
Number of Sequences: 336
Number of extensions: 2200
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12468463
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)