Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0077
(519 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g63100.1 68416.m07087 glycine-rich protein 31 0.47
At3g20410.1 68416.m02585 calmodulin-domain protein kinase isofor... 29 1.9
At1g50700.1 68414.m05701 calcium-dependent protein kinase, putat... 29 1.9
At4g09630.1 68417.m01583 expressed protein contains Pfam profile... 29 2.5
At5g52330.1 68418.m06494 meprin and TRAF homology domain-contain... 28 3.3
At4g36080.1 68417.m05136 FAT domain-containing protein / phospha... 28 3.3
At5g37040.1 68418.m04442 F-box family protein contains Pfam prof... 27 5.7
At5g53550.1 68418.m06654 transporter, putative similar to iron-p... 27 7.6
At2g46180.1 68415.m05742 intracellular protein transport protein... 27 7.6
At1g57570.1 68414.m06533 jacalin lectin family protein similar t... 27 7.6
At1g14520.1 68414.m01721 oxygenase-related similar to myo-inosit... 27 7.6
>At3g63100.1 68416.m07087 glycine-rich protein
Length = 199
Score = 31.1 bits (67), Expect = 0.47
Identities = 14/39 (35%), Positives = 16/39 (41%)
Frame = +1
Query: 316 HQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQH 432
H GH GHD G H G GH +R D +H
Sbjct: 77 HGYGHGHREHGHDRGHGHGRGHGHGHGHGHRRHGRDHRH 115
Score = 30.7 bits (66), Expect = 0.61
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = +1
Query: 307 HVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQH 432
H EH DRGH GH G H G GH R D H
Sbjct: 83 HREHGHDRGH---GHGRGHGHGHGHGHRRHGRDHRHGRDRGH 121
>At3g20410.1 68416.m02585 calmodulin-domain protein kinase isoform 9
(CPK9) identical to calmodulin-domain protein kinase
CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 541
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 215 GYPFDRPIDMASFFTSNMKFADVMIYRKDLGMSNTSKTVDTSEMVMMKDDLTYLDSDMLV 394
G D+PID A S MK M K L + ++ +DT E+ +K +D+D
Sbjct: 353 GEASDKPIDSAVL--SRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSG 410
Query: 395 KRTYKDV 415
TY+++
Sbjct: 411 TITYEEL 417
>At1g50700.1 68414.m05701 calcium-dependent protein kinase, putative
/ CDPK, putative similar to calmodulin-domain protein
kinase CDPK isoform 9 [Arabidopsis thaliana]
gi|1399265|gb|AAB03242
Length = 521
Score = 29.1 bits (62), Expect = 1.9
Identities = 20/67 (29%), Positives = 32/67 (47%)
Frame = +2
Query: 215 GYPFDRPIDMASFFTSNMKFADVMIYRKDLGMSNTSKTVDTSEMVMMKDDLTYLDSDMLV 394
G D+PID A S MK M K L + ++ +DT E+ +K +D+D
Sbjct: 335 GEASDKPIDSAVL--SRMKQFRAMNKLKKLALKVIAENIDTEEIQGLKAMFANIDTDNSG 392
Query: 395 KRTYKDV 415
TY+++
Sbjct: 393 TITYEEL 399
>At4g09630.1 68417.m01583 expressed protein contains Pfam profile:
PF04765 protein of unknown function (DUF616)
Length = 711
Score = 28.7 bits (61), Expect = 2.5
Identities = 15/52 (28%), Positives = 23/52 (44%)
Frame = +1
Query: 283 NDLQKRPRHVEHQQDRGHLGDGHDEGRSHLPGLGHAGQEDLQRRHDDEQHDE 438
ND +P E +D D HD +GH G E+ + D+ +H+E
Sbjct: 220 NDGHHQPFDTESNEDDSI--DSHDTQGDEYVDMGHDGDENEESHKDNHKHNE 269
>At5g52330.1 68418.m06494 meprin and TRAF homology domain-containing
protein / MATH domain-containing protein weak similarity
to ubiquitin-specific protease 12 [Arabidopsis thaliana]
GI:11993471; contains Pfam profile PF00917: MATH domain
Length = 397
Score = 28.3 bits (60), Expect = 3.3
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = -3
Query: 319 GVRHAEVFSVDHYVSELHVASEEARHVNRSVKWISE 212
G R E+F +DH S++ VA +EA + R + I E
Sbjct: 341 GRRTVEIFVLDHIFSKIEVAYKEAIALKRQEELIRE 376
>At4g36080.1 68417.m05136 FAT domain-containing protein /
phosphatidylinositol 3- and 4-kinase family protein
contains Pfam profiles PF00454: Phosphatidylinositol 3-
and 4-kinase, PF02259: FAT domain, PF02260: FATC domain
Length = 3839
Score = 28.3 bits (60), Expect = 3.3
Identities = 19/59 (32%), Positives = 29/59 (49%)
Frame = -3
Query: 250 ARHVNRSVKWISERHGGDT*APATSTTVLHHGHVQCGQEHTGADRRHDDVHLHLQTSNR 74
A+ + ++V +S HGG S T +H G + +GA HD +LH+Q S R
Sbjct: 3209 AQRMQQNVPGVSAGHGGGN---LPSETQIHQG-----SQTSGAVGTHDGGNLHVQESER 3259
>At5g37040.1 68418.m04442 F-box family protein contains Pfam
profile: PF00646 F-box domain
Length = 242
Score = 27.5 bits (58), Expect = 5.7
Identities = 11/23 (47%), Positives = 12/23 (52%)
Frame = -3
Query: 349 DHLRGVHGLAGVRHAEVFSVDHY 281
DHLRG H L G F DH+
Sbjct: 85 DHLRGQHSLYGTCDGNFFLYDHF 107
>At5g53550.1 68418.m06654 transporter, putative similar to
iron-phytosiderophore transporter protein yellow stripe
1 [Zea mays] GI:10770865; contains Pfam profile PF03169:
OPT oligopeptide transporter protein
Length = 669
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/52 (25%), Positives = 26/52 (50%)
Frame = -1
Query: 270 FMLLVKKLAMSIGLSNGYPRGMVEIHELQRQAQRSFIMVMSNVGKSIPVRTG 115
F+++ LA S+G SN Y G+ +++ + + ++ + GK V G
Sbjct: 411 FIVVAYMLAPSLGFSNAYGAGLTDMNMAYNYGKVALFILAAMAGKQNGVVAG 462
>At2g46180.1 68415.m05742 intracellular protein transport protein
USO1-related similar to Intracellular protein transport
protein USO1 (Swiss-Prot:P25386) [Saccharomyces
cerevisiae]
Length = 725
Score = 27.1 bits (57), Expect = 7.6
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -3
Query: 319 GVRHAEVFSVDHYVSELHVASEEARHVNRSVKWISER 209
G +AE+ + +H+ EL VA E+A ++ +K + E+
Sbjct: 474 GQYYAEIEAKEHFERELAVAKEDAMKLSARLKDVDEQ 510
>At1g57570.1 68414.m06533 jacalin lectin family protein similar to
myrosinase-binding protein homolog [Arabidopsis
thaliana] GI:2997767; contains Pfam profile PF01419
jacalin-like lectin domain
Length = 614
Score = 27.1 bits (57), Expect = 7.6
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = -3
Query: 346 HLRG-VHGLAGVRHAEVFSVDHYVSELHVASEEARHVNRS 230
H+ G +HGL+G + F +DH +E H+ E + + S
Sbjct: 221 HINGSIHGLSGSGFTQTFEIDHLNNE-HLVCVEGYYDDES 259
>At1g14520.1 68414.m01721 oxygenase-related similar to myo-inositol
oxygenase [Sus scrofa] gi|17432544|gb|AAL39076
Length = 311
Score = 27.1 bits (57), Expect = 7.6
Identities = 18/65 (27%), Positives = 25/65 (38%)
Frame = +2
Query: 182 RWSSCISTMPLGYPFDRPIDMASFFTSNMKFADVMIYRKDLGMSNTSKTVDTSEMVMMKD 361
+W+ T P+G FD I +F N + D Y G+ +D M D
Sbjct: 163 QWAVVGDTFPVGCAFDESIVHHKYFKENPDY-DNPSYNSKYGIYTEGCGLDNVLMSWGHD 221
Query: 362 DLTYL 376
D YL
Sbjct: 222 DYMYL 226
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,975,299
Number of Sequences: 28952
Number of extensions: 200486
Number of successful extensions: 688
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 670
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 685
length of database: 12,070,560
effective HSP length: 76
effective length of database: 9,870,208
effective search space used: 947539968
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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