Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0076
(585 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ168450-1|ABA56163.1| 394|Homo sapiens signal peptide peptidas... 31 4.0
BC062595-1|AAH62595.1| 377|Homo sapiens histocompatibility (min... 31 4.0
BC008959-1|AAH08959.1| 377|Homo sapiens histocompatibility (min... 31 4.0
BC008938-1|AAH08938.1| 377|Homo sapiens histocompatibility (min... 31 4.0
AY169312-1|AAO12537.1| 426|Homo sapiens intramembrane protease ... 31 4.0
AY169311-1|AAO12536.1| 377|Homo sapiens intramembrane protease ... 31 4.0
AY169310-1|AAO12535.1| 394|Homo sapiens intramembrane protease ... 31 4.0
AL121751-8|CAI19154.2| 426|Homo sapiens histocompatibility (min... 31 4.0
AL121751-7|CAI19153.1| 377|Homo sapiens histocompatibility (min... 31 4.0
AL121751-6|CAI19152.1| 272|Homo sapiens histocompatibility (min... 31 4.0
AL110115-6|CAI20175.2| 426|Homo sapiens histocompatibility (min... 31 4.0
AL110115-5|CAI20174.1| 377|Homo sapiens histocompatibility (min... 31 4.0
AL110115-4|CAI20173.1| 272|Homo sapiens histocompatibility (min... 31 4.0
AK075283-1|BAC11519.1| 377|Homo sapiens protein ( Homo sapiens ... 31 4.0
AJ420895-1|CAD13132.1| 377|Homo sapiens signal peptide peptidas... 31 4.0
AJ345029-1|CAC87790.1| 377|Homo sapiens presenilin-like protein... 31 4.0
AF515663-1|AAN77099.1| 377|Homo sapiens putative presenilin-lik... 31 4.0
AF483215-1|AAM22076.1| 377|Homo sapiens minor histocompatibilit... 31 4.0
>DQ168450-1|ABA56163.1| 394|Homo sapiens signal peptide peptidase
beta protein.
Length = 394
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>BC062595-1|AAH62595.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>BC008959-1|AAH08959.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>BC008938-1|AAH08938.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AY169312-1|AAO12537.1| 426|Homo sapiens intramembrane protease
isoform 3 protein.
Length = 426
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AY169311-1|AAO12536.1| 377|Homo sapiens intramembrane protease
isoform 1 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AY169310-1|AAO12535.1| 394|Homo sapiens intramembrane protease
isoform 2 protein.
Length = 394
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL121751-8|CAI19154.2| 426|Homo sapiens histocompatibility (minor)
13 protein.
Length = 426
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL121751-7|CAI19153.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL121751-6|CAI19152.1| 272|Homo sapiens histocompatibility (minor)
13 protein.
Length = 272
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL110115-6|CAI20175.2| 426|Homo sapiens histocompatibility (minor)
13 protein.
Length = 426
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL110115-5|CAI20174.1| 377|Homo sapiens histocompatibility (minor)
13 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AL110115-4|CAI20173.1| 272|Homo sapiens histocompatibility (minor)
13 protein.
Length = 272
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AK075283-1|BAC11519.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ90802 fis, clone Y79AA1000226, highly similar to
Minor histocompatibility antigen H13 (EC3.4.99.-). ).
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AJ420895-1|CAD13132.1| 377|Homo sapiens signal peptide peptidase
protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AJ345029-1|CAC87790.1| 377|Homo sapiens presenilin-like protein 3
protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AF515663-1|AAN77099.1| 377|Homo sapiens putative presenilin-like
aspartyl protease protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
>AF483215-1|AAM22076.1| 377|Homo sapiens minor histocompatibility
antigen H13 isoform 1 protein.
Length = 377
Score = 30.7 bits (66), Expect = 4.0
Identities = 19/49 (38%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Frame = +3
Query: 342 DKCAFQILNSC*VLMNITAYK-FNRTYLILVLK*YFIELGINIFSETFS 485
D F I+ SC +L +K F++ Y+ L+L YF LGI S T S
Sbjct: 74 DAARFPIIASCTLLGLYLFFKIFSQEYINLLLSMYFFVLGILALSHTIS 122
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,445,461
Number of Sequences: 237096
Number of extensions: 1353941
Number of successful extensions: 2467
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 2385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2456
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 6098631048
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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