Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0068
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC093746-1|AAH93746.2| 778|Homo sapiens PDZ domain containing R... 38 0.051
BC093744-1|AAH93744.1| 778|Homo sapiens PDZ domain containing R... 38 0.051
AK131554-1|BAD18688.1| 776|Homo sapiens protein ( Homo sapiens ... 38 0.051
AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens ... 32 1.9
BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6... 31 4.4
BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein. 31 4.4
BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein. 31 4.4
BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6... 31 4.4
AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens ... 31 4.4
AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein. 31 4.4
AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor inter... 31 4.4
AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting prote... 31 4.4
AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein. 31 4.4
>BC093746-1|AAH93746.2| 778|Homo sapiens PDZ domain containing RING
finger 4 protein.
Length = 778
Score = 37.5 bits (83), Expect = 0.051
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 170 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 340
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 53 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112
Query: 341 SSHLEHAFISDFDYNNSRPSDQE 409
+EH F D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135
>BC093744-1|AAH93744.1| 778|Homo sapiens PDZ domain containing RING
finger 4 protein.
Length = 778
Score = 37.5 bits (83), Expect = 0.051
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 170 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 340
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 53 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 112
Query: 341 SSHLEHAFISDFDYNNSRPSDQE 409
+EH F D +Y +S P+D +
Sbjct: 113 LHPMEHEFYEDNEYISSLPADAD 135
>AK131554-1|BAD18688.1| 776|Homo sapiens protein ( Homo sapiens
cDNA FLJ16796 fis, clone TBAES2008133, moderately
similar to Mus musculus semaF cytoplasmic domain
associated protein 3. ).
Length = 776
Score = 37.5 bits (83), Expect = 0.051
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 3/83 (3%)
Frame = +2
Query: 170 LVRTFEPEPAYPVETS-KYVERSTQADPADKHLSP-KQLRPPSKLILS-SEYLCTSSKHL 340
L RT PAY + + + + STQ D +H+ +LRPP+ + +L + S H
Sbjct: 51 LRRTPLSRPAYGMASEVQLMNASTQTDITFEHIMALAKLRPPTPPVPDICPFLLSDSCHS 110
Query: 341 SSHLEHAFISDFDYNNSRPSDQE 409
+EH F D +Y +S P+D +
Sbjct: 111 LHPMEHEFYEDNEYISSLPADAD 133
>AK172839-1|BAD18804.1| 473|Homo sapiens protein ( Homo sapiens
cDNA FLJ24000 fis, clone KAIA1329, highly similar to
Homo sapiens cAMP responsive element binding protein
3-like 3 ).
Length = 473
Score = 32.3 bits (70), Expect = 1.9
Identities = 20/64 (31%), Positives = 29/64 (45%)
Frame = -1
Query: 705 LQPARLXLWHFDQGLPE*QQVRXEEWVNGPXKHGSQSCRPSSGRCKLCHQLQCKSTSPFS 526
L A L L + +GL QV +WV +H ++CR G + C Q + P
Sbjct: 376 LDNATLVLRNATEGLG---QVAPLDWVAPGPEHWLRTCRAGGGGRRACEPRQDYAPRPLC 432
Query: 525 PGLP 514
PG+P
Sbjct: 433 PGVP 436
>BT007367-1|AAP36031.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>BC068454-1|AAH68454.1| 873|Homo sapiens PDCD6IP protein protein.
Length = 873
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 839 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 872
>BC025688-1|AAH25688.1| 377|Homo sapiens mucin 7, secreted protein.
Length = 377
Score = 31.1 bits (67), Expect = 4.4
Identities = 18/45 (40%), Positives = 20/45 (44%)
Frame = +3
Query: 195 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 329
PP P T APP P P APP +S P+ T APP
Sbjct: 202 PPSSSAPPETTAAPPTP-------PATTPAPPSSSAPPETTAAPP 239
>BC020066-1|AAH20066.1| 868|Homo sapiens programmed cell death 6
interacting protein protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AK002122-1|BAA92092.1| 617|Homo sapiens protein ( Homo sapiens
cDNA FLJ11260 fis, clone PLACE1009060, weakly similar to
BRO1 PROTEIN. ).
Length = 617
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 583 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 616
>AF349951-1|AAK20398.1| 868|Homo sapiens HP95 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AF250394-1|AAQ14260.1| 868|Homo sapiens dopamine receptor
interacting protein 4 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AF151793-1|AAF08220.1| 868|Homo sapiens ALG-2 interacting protein
1 protein.
Length = 868
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 834 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 867
>AB037796-1|BAA92613.1| 546|Homo sapiens KIAA1375 protein protein.
Length = 546
Score = 31.1 bits (67), Expect = 4.4
Identities = 19/40 (47%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 195 PPIQWKPQNTWNAP-PKPIQPINTYPQNNYAPPQNSYYPQ 311
PP+ Q+ AP P P QP +PQ PPQ SYYPQ
Sbjct: 512 PPVYH--QSPGQAPYPGPQQPSYPFPQ----PPQQSYYPQ 545
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 105,192,688
Number of Sequences: 237096
Number of extensions: 2427447
Number of successful extensions: 7460
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 6864
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7421
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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