Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0067
(650 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 25 0.71
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 25 0.71
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 25 0.71
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 25 0.71
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 25 0.71
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 25 0.71
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 25 0.71
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 25 0.71
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad... 22 3.8
AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory recept... 22 5.0
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 24.6 bits (51), Expect = 0.71
Identities = 15/42 (35%), Positives = 20/42 (47%), Gaps = 3/42 (7%)
Frame = -3
Query: 294 YNPEASSLRPPS-FSLHAVGPQATS--WIRPTPSIGNDRVLG 178
YNP A+S PP+ +S V PQ + P P G +G
Sbjct: 30 YNPNANSTYPPACYSPPQVAPQYPQHPYAAPAPGHGLQPTMG 71
>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
adhesion molecule splicevariant 3.12.3.1 protein.
Length = 1639
Score = 22.2 bits (45), Expect = 3.8
Identities = 7/15 (46%), Positives = 10/15 (66%)
Frame = +2
Query: 464 IRWYINGHEMEDTRG 508
I W +NGH ++ T G
Sbjct: 636 ISWTLNGHFIDQTNG 650
Score = 21.0 bits (42), Expect = 8.8
Identities = 8/24 (33%), Positives = 11/24 (45%)
Frame = +1
Query: 166 TGRRAEYTIVSNTRSGTDPTGSLW 237
T RR + ++ G P G LW
Sbjct: 807 TSRRGDPAVLQCEAKGEKPIGILW 830
>AM292340-1|CAL23152.1| 355|Tribolium castaneum gustatory receptor
candidate 19 protein.
Length = 355
Score = 21.8 bits (44), Expect = 5.0
Identities = 5/13 (38%), Positives = 10/13 (76%)
Frame = -2
Query: 511 FAPCVFHFMSVYV 473
F PC+++F S ++
Sbjct: 208 FLPCIYYFYSAFI 220
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 155,710
Number of Sequences: 336
Number of extensions: 3316
Number of successful extensions: 11
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16760905
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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