Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0067
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81513-12|CAE17799.1| 417|Caenorhabditis elegans Hypothetical p... 31 0.71
AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical ... 31 0.71
U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein. 30 1.6
AY753200-1|AAV31408.1| 402|Caenorhabditis elegans UNC-89 protein. 30 1.6
AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated... 30 1.6
AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated... 30 1.6
Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical pr... 29 2.9
AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical ... 29 2.9
Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical pr... 28 5.0
AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B prot... 28 5.0
Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 6.6
Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical pr... 28 6.6
AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical... 28 6.6
AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical ... 28 6.6
AL032650-1|CAE54929.1| 551|Caenorhabditis elegans Hypothetical ... 28 6.6
U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusi... 27 8.7
U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusi... 27 8.7
U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical pr... 27 8.7
>Z81513-12|CAE17799.1| 417|Caenorhabditis elegans Hypothetical
protein F26D2.16 protein.
Length = 417
Score = 31.1 bits (67), Expect = 0.71
Identities = 16/48 (33%), Positives = 25/48 (52%)
Frame = +3
Query: 309 KEMLRLIYSSPAKRICKFTVTNTGSHCSKVWLRNTLKGN*YKPIVVPL 452
+E++ I +PA RI F VT+T W+ T+ G KP+ + L
Sbjct: 212 EEVIDAIVKTPADRIVNFVVTSTTDKGVDQWVNITVTGLTSKPVDITL 259
>AC006689-1|AAF39971.2| 257|Caenorhabditis elegans Hypothetical
protein T22E7.2 protein.
Length = 257
Score = 31.1 bits (67), Expect = 0.71
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +3
Query: 354 CKFTVTNTGSHCSKVWLRNTLKGN*YKPIVV 446
C F + + HC VWL N + G Y+P VV
Sbjct: 56 CNFCIDDFDHHC--VWLNNCIGGKNYRPFVV 84
>U33058-1|AAB00542.1| 6632|Caenorhabditis elegans UNC-89 protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 2012 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 2066
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 6546 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 6586
>AY753200-1|AAV31408.1| 402|Caenorhabditis elegans UNC-89 protein.
Length = 402
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 338 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 392
>AF003131-5|AAV34799.1| 5992|Caenorhabditis elegans Uncoordinated
protein 89, isoform e protein.
Length = 5992
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 1372 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 1426
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 5906 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 5946
>AF003131-4|AAB54132.2| 6632|Caenorhabditis elegans Uncoordinated
protein 89, isoform a protein.
Length = 6632
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 2012 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 2066
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 6546 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 6586
>AF003131-3|AAV34801.1| 7122|Caenorhabditis elegans Uncoordinated
protein 89, isoform g protein.
Length = 7122
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 2012 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 2066
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 6546 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 6586
>AF003131-2|AAV34800.1| 7441|Caenorhabditis elegans Uncoordinated
protein 89, isoform f protein.
Length = 7441
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 1372 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 1426
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 5906 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 5946
>AF003131-1|AAP68958.1| 8081|Caenorhabditis elegans Uncoordinated
protein 89, isoform b protein.
Length = 8081
Score = 29.9 bits (64), Expect = 1.6
Identities = 15/56 (26%), Positives = 26/56 (46%)
Frame = +2
Query: 467 RWYINGHEMEDTRGKATLKKNSSRFDFVGVPPTMTMQCAEFRYGRLLGSKEXSARL 634
+WY NG+ +ED + T+K ++ + +P +GS E SA+L
Sbjct: 2012 KWYQNGNLLEDGKNGVTIKNEENKSSLI-IPNAQDSGKITVEASNEVGSSESSAQL 2066
Score = 29.5 bits (63), Expect = 2.2
Identities = 9/18 (50%), Positives = 14/18 (77%)
Frame = +2
Query: 443 RAAPDSEIRWYINGHEME 496
R P+ E+ W+INGH+M+
Sbjct: 970 RGNPNPEVTWFINGHKMD 987
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 6546 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 6586
>Z48795-2|CAA88726.1| 149|Caenorhabditis elegans Hypothetical
protein R05H5.3 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/37 (32%), Positives = 19/37 (51%)
Frame = -1
Query: 554 HLRNRISNCFFSRSLCPLCLPFHVRLCTNVFRSRERH 444
HL+ ++ +FS S CP C F +L R++H
Sbjct: 23 HLKGKVVGLYFSASWCPPCRQFTPKLTRFFDEIRKKH 59
>AC024806-1|AAF59524.1| 149|Caenorhabditis elegans Hypothetical
protein Y52E8A.3 protein.
Length = 149
Score = 29.1 bits (62), Expect = 2.9
Identities = 12/29 (41%), Positives = 17/29 (58%)
Frame = -1
Query: 563 SEGHLRNRISNCFFSRSLCPLCLPFHVRL 477
+E HL+ +I +FS S CP C F +L
Sbjct: 20 AEEHLKGKIIGLYFSASWCPPCRAFTPKL 48
>Z69664-6|CAA93513.2| 1159|Caenorhabditis elegans Hypothetical
protein K04D7.4 protein.
Length = 1159
Score = 28.3 bits (60), Expect = 5.0
Identities = 21/65 (32%), Positives = 34/65 (52%), Gaps = 1/65 (1%)
Frame = +2
Query: 125 LNWFKGSTEFFRYKPGA-APSTRSFPILGVGRIQLVACGPTACRLKLGGLSEEASGLYRC 301
L+WF+ + Y+ A S+R + + GR QL+ T L++ ++ E SG YRC
Sbjct: 60 LDWFQDDSLVASYQQDILADSSRQWWVSD-GRYQLIRPFYT---LRVSPVTPEDSGTYRC 115
Query: 302 DIERD 316
+E D
Sbjct: 116 RLETD 120
>AY724774-1|AAU21474.1| 750|Caenorhabditis elegans UNC-89-B
protein.
Length = 750
Score = 28.3 bits (60), Expect = 5.0
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 197 PILGVGRIQLVACGPTACRLKLGGLSEEASGLYRCDIERDA 319
PI+ RI+ V GP C L + SG+Y C DA
Sbjct: 625 PIVESSRIKFVQDGPYLCSLIINDPMWRDSGIYSCVAVNDA 665
>Z81037-9|CAB02749.2| 425|Caenorhabditis elegans Hypothetical
protein C17E4.1 protein.
Length = 425
Score = 27.9 bits (59), Expect = 6.6
Identities = 9/21 (42%), Positives = 17/21 (80%)
Frame = +2
Query: 287 GLYRCDIERDAPPHLFESRKA 349
G+ + D++++APP +FE +KA
Sbjct: 165 GVPQADVQKNAPPSVFEKKKA 185
>Z54218-4|CAA90958.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = +1
Query: 31 FQHHVPHGPRGS------VAGTGRSGHRVPLRRQL 117
F+HH+PH P + AG GRSG + + R L
Sbjct: 1258 FRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLL 1292
>Z49910-9|CAA90125.1| 1367|Caenorhabditis elegans Hypothetical protein
F44G4.8 protein.
Length = 1367
Score = 27.9 bits (59), Expect = 6.6
Identities = 14/35 (40%), Positives = 19/35 (54%), Gaps = 6/35 (17%)
Frame = +1
Query: 31 FQHHVPHGPRGS------VAGTGRSGHRVPLRRQL 117
F+HH+PH P + AG GRSG + + R L
Sbjct: 1258 FRHHLPHSPHNAPTIVHCSAGVGRSGTFISIDRLL 1292
>AL110500-22|CAB60434.1| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 555 TPTKSNLELFFFKVALPLVSSISCPF 478
T K+++E+FF V LP++ S +C F
Sbjct: 367 THLKASIEVFFNSVILPMLDSNTCAF 392
>AL032650-3|CAA21704.2| 1628|Caenorhabditis elegans Hypothetical
protein Y6B3A.1a protein.
Length = 1628
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 555 TPTKSNLELFFFKVALPLVSSISCPF 478
T K+++E+FF V LP++ S +C F
Sbjct: 367 THLKASIEVFFNSVILPMLDSNTCAF 392
>AL032650-1|CAE54929.1| 551|Caenorhabditis elegans Hypothetical
protein Y6B3A.1b protein.
Length = 551
Score = 27.9 bits (59), Expect = 6.6
Identities = 11/26 (42%), Positives = 18/26 (69%)
Frame = -3
Query: 555 TPTKSNLELFFFKVALPLVSSISCPF 478
T K+++E+FF V LP++ S +C F
Sbjct: 367 THLKASIEVFFNSVILPMLDSNTCAF 392
>U23529-12|AAL13323.1| 561|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform b protein.
Length = 561
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 353 YTLCGTRINEAEHLFLCH 300
+TLCG RI A H+ +CH
Sbjct: 480 WTLCGQRIIAAAHVNICH 497
>U23529-11|AAK39165.1| 519|Caenorhabditis elegans Cation diffusion
facilitator familyprotein 1, isoform a protein.
Length = 519
Score = 27.5 bits (58), Expect = 8.7
Identities = 10/18 (55%), Positives = 13/18 (72%)
Frame = -1
Query: 353 YTLCGTRINEAEHLFLCH 300
+TLCG RI A H+ +CH
Sbjct: 438 WTLCGQRIIAAAHVNICH 455
>U12965-3|AAZ32811.1| 980|Caenorhabditis elegans Hypothetical
protein F23F12.8 protein.
Length = 980
Score = 27.5 bits (58), Expect = 8.7
Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)
Frame = -3
Query: 294 YNPEASSLRPPSFSLHAV--GPQATSWIRPTPS 202
Y P+ S RPP H + Q+ W P+P+
Sbjct: 632 YRPDISEYRPPDVESHMIRFTTQSPEWATPSPT 664
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,457,675
Number of Sequences: 27780
Number of extensions: 336111
Number of successful extensions: 1146
Number of sequences better than 10.0: 22
Number of HSP's better than 10.0 without gapping: 984
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1146
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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