Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0066
         (700 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    27   0.15 
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    23   2.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    23   3.2  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   9.7  
AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5 prot...    21   9.7  
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    21   9.7  

>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 27.1 bits (57), Expect = 0.15
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
 Frame = +2

Query: 599 QCHRDQKCPPPRY-----ESCNTHSCEFVWGF*RLGXN 697
           QC+++ KCP  R      E CNT++CEF      LG N
Sbjct: 487 QCNQN-KCPVKRGNGRCDEECNTYACEFDGNDCSLGIN 523


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 12/25 (48%), Positives = 15/25 (60%), Gaps = 2/25 (8%)
 Frame = +1

Query: 226 LPSGQLLEI--RSERASESSDCGNG 294
           LP  +LL+   +S R   SS CGNG
Sbjct: 26  LPEEKLLDALCQSFRKQNSSSCGNG 50


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 22.6 bits (46), Expect = 3.2
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = -3

Query: 311 SLKCYCPFPQSEDSEARSDRISSSCP 234
           S+K  CP P  ++   R  R   +CP
Sbjct: 84  SIKNECPEPTCDEPVHRPGRCCKTCP 109


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 7/24 (29%), Positives = 12/24 (50%)
 Frame = +1

Query: 463 RCGQCGRVSQLQHSNWTHETIGIQ 534
           +C QC  V+  +   W H  + I+
Sbjct: 203 KCKQCDFVAITKLEQWNHSKVHIR 226


>AY675073-1|AAV74190.1|  533|Tribolium castaneum chitinase 5
           protein.
          Length = 533

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = +3

Query: 207 PKNSTSAPFRTTT*NTIRA 263
           P+ STS   RTTT +T  A
Sbjct: 438 PEKSTSTTQRTTTVSTTEA 456


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 21.0 bits (42), Expect = 9.7
 Identities = 6/12 (50%), Positives = 9/12 (75%)
 Frame = +2

Query: 626 PPRYESCNTHSC 661
           PP++E   TH+C
Sbjct: 16  PPKFELPTTHNC 27


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 158,697
Number of Sequences: 336
Number of extensions: 3327
Number of successful extensions: 8
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18426585
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)