Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0066
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical pr... 46 3e-05
U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical pr... 46 3e-05
Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical pr... 42 3e-04
Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical pr... 42 3e-04
AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein. 42 3e-04
Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical pr... 37 0.016
Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical pr... 36 0.021
AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular... 36 0.021
U29378-11|AAP40540.1| 125|Caenorhabditis elegans Adamts family ... 36 0.037
U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family p... 36 0.037
AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like p... 36 0.037
Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical pr... 35 0.049
Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical p... 35 0.049
U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family ... 34 0.11
Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical pr... 32 0.34
U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astaci... 32 0.34
U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical pr... 31 1.0
DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein. 31 1.0
DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein. 31 1.0
DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein. 31 1.0
AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical ... 30 1.8
AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical ... 30 1.8
Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical pr... 29 2.4
Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical pr... 29 3.2
AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine... 29 3.2
U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical pr... 28 5.6
>U64857-3|AAM29666.1| 1487|Caenorhabditis elegans Hypothetical
protein C37C3.6c protein.
Length = 1487
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +2
Query: 470 VSVDVSVNYSTPTGRTRPLEYRWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCN 649
VSV V + TG P W + CS SCGGGV+L QC D RY SCN
Sbjct: 64 VSVTVDKSGQKETGNWGP----W-VPENECSRSCGGGVQLEKRQCSGDCTGASVRYISCN 118
Query: 650 THSCE 664
++CE
Sbjct: 119 LNACE 123
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 15/82 (18%)
Frame = +2
Query: 473 SVDVSVNYSTPTGRTRPLEYRWSIERG-PCSASCGGGVRLITAQC--------HRDQKC- 622
S D ++ Y ++Y + + PCS SCG GV+ C D C
Sbjct: 324 SRDTAIKYEFSIPLEEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
Query: 623 ----PPPRYE-SCNTHSCEFVW 673
P +E SC T CE W
Sbjct: 384 ENNATKPEFEKSCETVDCEAEW 405
>U64857-2|AAC25867.1| 1558|Caenorhabditis elegans Hypothetical
protein C37C3.6a protein.
Length = 1558
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +2
Query: 470 VSVDVSVNYSTPTGRTRPLEYRWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCN 649
VSV V + TG P W + CS SCGGGV+L QC D RY SCN
Sbjct: 64 VSVTVDKSGQKETGNWGP----W-VPENECSRSCGGGVQLEKRQCSGDCTGASVRYISCN 118
Query: 650 THSCE 664
++CE
Sbjct: 119 LNACE 123
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 15/82 (18%)
Frame = +2
Query: 473 SVDVSVNYSTPTGRTRPLEYRWSIERG-PCSASCGGGVRLITAQC--------HRDQKC- 622
S D ++ Y ++Y + + PCS SCG GV+ C D C
Sbjct: 324 SRDTAIKYEFSIPLEEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
Query: 623 ----PPPRYE-SCNTHSCEFVW 673
P +E SC T CE W
Sbjct: 384 ENNATKPEFEKSCETVDCEAEW 405
>U64857-1|AAC25868.1| 2167|Caenorhabditis elegans Hypothetical
protein C37C3.6b protein.
Length = 2167
Score = 45.6 bits (103), Expect = 3e-05
Identities = 27/65 (41%), Positives = 32/65 (49%)
Frame = +2
Query: 470 VSVDVSVNYSTPTGRTRPLEYRWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYESCN 649
VSV V + TG P W + CS SCGGGV+L QC D RY SCN
Sbjct: 64 VSVTVDKSGQKETGNWGP----W-VPENECSRSCGGGVQLEKRQCSGDCTGASVRYISCN 118
Query: 650 THSCE 664
++CE
Sbjct: 119 LNACE 123
Score = 29.5 bits (63), Expect = 2.4
Identities = 23/82 (28%), Positives = 31/82 (37%), Gaps = 15/82 (18%)
Frame = +2
Query: 473 SVDVSVNYSTPTGRTRPLEYRWSIERG-PCSASCGGGVRLITAQC--------HRDQKC- 622
S D ++ Y ++Y + + PCS SCG GV+ C D C
Sbjct: 324 SRDTAIKYEFSIPLEEEVDYMYKFDNWTPCSVSCGKGVQTRNLYCIDGKNKGRVEDDLCE 383
Query: 623 ----PPPRYE-SCNTHSCEFVW 673
P +E SC T CE W
Sbjct: 384 ENNATKPEFEKSCETVDCEAEW 405
>Z50006-7|CAA90302.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC--EFVW 673
+WS E GPCS +CG G R+ T C ++ CP + E CN +SC F+W
Sbjct: 1040 KWS-EWGPCSVTCGSGRRVRTRGC-QEASCPEQHIQTEECNLNSCLELFIW 1088
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 545 ERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC-EFVWG 676
E CS SCGGG R +C D KC ESCNT C WG
Sbjct: 812 EWSSCSQSCGGGRRYRIRKC-LDDKCDGDDLEKESCNTQKCISQSWG 857
>Z50004-4|CAA90293.2| 1461|Caenorhabditis elegans Hypothetical protein
C02B4.1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC--EFVW 673
+WS E GPCS +CG G R+ T C ++ CP + E CN +SC F+W
Sbjct: 1040 KWS-EWGPCSVTCGSGRRVRTRGC-QEASCPEQHIQTEECNLNSCLELFIW 1088
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 545 ERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC-EFVWG 676
E CS SCGGG R +C D KC ESCNT C WG
Sbjct: 812 EWSSCSQSCGGGRRYRIRKC-LDDKCDGDDLEKESCNTQKCISQSWG 857
>AB066246-1|BAC05514.1| 1461|Caenorhabditis elegans ADT-1 protein.
Length = 1461
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/51 (43%), Positives = 30/51 (58%), Gaps = 4/51 (7%)
Frame = +2
Query: 533 RWSIERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC--EFVW 673
+WS E GPCS +CG G R+ T C ++ CP + E CN +SC F+W
Sbjct: 1040 KWS-EWGPCSVTCGSGRRVRTRGC-QEASCPEQHIQTEECNLNSCLELFIW 1088
Score = 35.1 bits (77), Expect = 0.049
Identities = 21/47 (44%), Positives = 22/47 (46%), Gaps = 3/47 (6%)
Frame = +2
Query: 545 ERGPCSASCGGGVRLITAQCHRDQKCPPP--RYESCNTHSC-EFVWG 676
E CS SCGGG R +C D KC ESCNT C WG
Sbjct: 812 EWSSCSQSCGGGRRYRIRKC-LDDKCDGDDLEKESCNTQKCISQSWG 857
>Z78415-8|CAB01675.2| 765|Caenorhabditis elegans Hypothetical
protein C17G1.6a protein.
Length = 765
Score = 36.7 bits (81), Expect = 0.016
Identities = 29/106 (27%), Positives = 43/106 (40%), Gaps = 12/106 (11%)
Frame = +2
Query: 380 DTDIYITSESRLQTDLMIMAIPVNPTLEDAVSVDVS------VNYSTPTGRTRPLEYRWS 541
D +++ S + +++ +P A D+S + TPT P WS
Sbjct: 521 DPSTFLSPSSSSASPALLLPSDASPQRPSAQEHDLSQLSQNALTRPTPTTTVAPDTASWS 580
Query: 542 I--ERGPCSASCGG-GVRLITAQCHR-DQKCPPPRY--ESCNTHSC 661
E CS CGG G + C+ +Q CP ESCN H+C
Sbjct: 581 AWGEWSACSQPCGGCGTKTRVRACYGGNQVCPGSNLDRESCNAHAC 626
>Z78415-9|CAI58633.1| 685|Caenorhabditis elegans Hypothetical
protein C17G1.6b protein.
Length = 685
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Frame = +2
Query: 500 TPTGRTRPLEYRWSI--ERGPCSASCGG-GVRLITAQCHR-DQKCPPPRY--ESCNTHSC 661
TPT P WS E CS CGG G + C+ +Q CP ESCN H+C
Sbjct: 487 TPTTTVAPDTASWSAWGEWSACSQPCGGCGTKTRVRACYGGNQVCPGSNLDRESCNAHAC 546
>AY912076-1|AAX81408.1| 685|Caenorhabditis elegans extracellular
matrix metalloproteaseprotein.
Length = 685
Score = 36.3 bits (80), Expect = 0.021
Identities = 23/60 (38%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Frame = +2
Query: 500 TPTGRTRPLEYRWSI--ERGPCSASCGG-GVRLITAQCHR-DQKCPPPRY--ESCNTHSC 661
TPT P WS E CS CGG G + C+ +Q CP ESCN H+C
Sbjct: 487 TPTTTVAPDTASWSAWGEWSACSQPCGGCGTKTRVRACYGGNQVCPGSNLDRESCNAHAC 546
>U29378-11|AAP40540.1| 125|Caenorhabditis elegans Adamts family
protein 2, isoform b protein.
Length = 125
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCEF 667
CS +CG GVR +C+ C +YE CN C+F
Sbjct: 83 CSETCGDGVRKRVRKCYGSGNCDGQQYEKQYCNLRVCDF 121
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCE 664
CS SCG GV+ T C R CP ES CN CE
Sbjct: 32 CSVSCGAGVKRRTRTC-RTGNCPGNYKESAICNDRDCE 68
>U29378-9|AAA68721.4| 1020|Caenorhabditis elegans Adamts family
protein 2, isoform a protein.
Length = 1020
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCEF 667
CS +CG GVR +C+ C +YE CN C+F
Sbjct: 978 CSETCGDGVRKRVRKCYGSGNCDGQQYEKQYCNLRVCDF 1016
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCE 664
CS SCG GV+ T C R CP ES CN CE
Sbjct: 927 CSVSCGAGVKRRTRTC-RTGNCPGNYKESAICNDRDCE 963
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCP--PPRYESCNTHSCEFV 670
WS+ C+A+CGGG R C +C E C++ SC V
Sbjct: 708 WSLWTS-CTATCGGGYRKRNRACSITGQCEGNEDETEVCSSESCPSV 753
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYE--SCNTHSCE 664
CS SCG G + C+R + C +E SCN +C+
Sbjct: 825 CSTSCGPGTLVRQRTCNR-EPCDGSAHERRSCNVATCQ 861
>AB072347-1|BAC41253.1| 1020|Caenorhabditis elegans ADAMTS-like
protease protein.
Length = 1020
Score = 35.5 bits (78), Expect = 0.037
Identities = 15/39 (38%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCEF 667
CS +CG GVR +C+ C +YE CN C+F
Sbjct: 978 CSETCGDGVRKRVRKCYGSGNCDGQQYEKQYCNLRVCDF 1016
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCE 664
CS SCG GV+ T C R CP ES CN CE
Sbjct: 927 CSVSCGAGVKRRTRTC-RTGNCPGNYKESAICNDRDCE 963
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCP--PPRYESCNTHSCEFV 670
WS+ C+A+CGGG R C +C E C++ SC V
Sbjct: 708 WSLWTS-CTATCGGGYRKRNRACSITGQCEGNEDETEVCSSESCPSV 753
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYE--SCNTHSCE 664
CS SCG G + C+R + C +E SCN +C+
Sbjct: 825 CSTSCGPGTLVRQRTCNR-EPCDGSAHERRSCNVATCQ 861
>Z69361-2|CAA93288.1| 2165|Caenorhabditis elegans Hypothetical protein
F25H8.3 protein.
Length = 2165
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +2
Query: 557 CSASCGGGVRLITAQC--------HRDQKCPPPRYESCNTHSCEFVWGF 679
CS SC GGV++ AQC H + P E CN H+C + W F
Sbjct: 1087 CSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW-WQF 1134
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHR---DQKCPPPRYESCNTHSC 661
CSASCGGG R + C D+ P ++ CN C
Sbjct: 1501 CSASCGGGWRRRSVSCTSSSCDETRKPKMFDKCNEELC 1538
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Frame = +2
Query: 551 GPCSASCGGGVRLITAQC------HRDQKC--PPPRYESCNTHSC 661
G CS +CGGGV+ C + + C RY SCNT C
Sbjct: 613 GECSRTCGGGVQKGLRDCDSPKPRNGGKYCVGQRERYRSCNTQEC 657
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 533 RWSIER-GPCSASCGGGVRLITAQCHRDQK 619
RW CS +CG G+R QC+R +K
Sbjct: 1696 RWKTTTWSSCSVTCGRGIRRREVQCYRGRK 1725
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 527 EYRWSIER-GPCSASCGGGVRLITAQC 604
E++WS G CS +CG G+R +C
Sbjct: 1883 EFKWSFGPWGECSKNCGQGIRRRRVKC 1909
>Z69360-10|CAA93287.1| 2165|Caenorhabditis elegans Hypothetical
protein F25H8.3 protein.
Length = 2165
Score = 35.1 bits (77), Expect = 0.049
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 8/49 (16%)
Frame = +2
Query: 557 CSASCGGGVRLITAQC--------HRDQKCPPPRYESCNTHSCEFVWGF 679
CS SC GGV++ AQC H + P E CN H+C + W F
Sbjct: 1087 CSRSCDGGVKMRHAQCLDAADRETHTSRCGPAQTQEHCNEHACTW-WQF 1134
Score = 32.7 bits (71), Expect = 0.26
Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 3/38 (7%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHR---DQKCPPPRYESCNTHSC 661
CSASCGGG R + C D+ P ++ CN C
Sbjct: 1501 CSASCGGGWRRRSVSCTSSSCDETRKPKMFDKCNEELC 1538
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 8/45 (17%)
Frame = +2
Query: 551 GPCSASCGGGVRLITAQC------HRDQKC--PPPRYESCNTHSC 661
G CS +CGGGV+ C + + C RY SCNT C
Sbjct: 613 GECSRTCGGGVQKGLRDCDSPKPRNGGKYCVGQRERYRSCNTQEC 657
Score = 29.1 bits (62), Expect = 3.2
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
Frame = +2
Query: 533 RWSIER-GPCSASCGGGVRLITAQCHRDQK 619
RW CS +CG G+R QC+R +K
Sbjct: 1696 RWKTTTWSSCSVTCGRGIRRREVQCYRGRK 1725
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/27 (40%), Positives = 16/27 (59%), Gaps = 1/27 (3%)
Frame = +2
Query: 527 EYRWSIER-GPCSASCGGGVRLITAQC 604
E++WS G CS +CG G+R +C
Sbjct: 1883 EFKWSFGPWGECSKNCGQGIRRRRVKC 1909
>U29378-10|AAP40541.1| 975|Caenorhabditis elegans Adamts family
protein 2, isoform c protein.
Length = 975
Score = 33.9 bits (74), Expect = 0.11
Identities = 18/38 (47%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCE 664
CS SCG GV+ T C R CP ES CN CE
Sbjct: 927 CSVSCGAGVKRRTRTC-RTGNCPGNYKESAICNDRDCE 963
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/47 (34%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +2
Query: 536 WSIERGPCSASCGGGVRLITAQCHRDQKCP--PPRYESCNTHSCEFV 670
WS+ C+A+CGGG R C +C E C++ SC V
Sbjct: 708 WSLWTS-CTATCGGGYRKRNRACSITGQCEGNEDETEVCSSESCPSV 753
Score = 28.7 bits (61), Expect = 4.2
Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)
Frame = +2
Query: 557 CSASCGGGVRLITAQCHRDQKCPPPRYE--SCNTHSCE 664
CS SCG G + C+R + C +E SCN +C+
Sbjct: 825 CSTSCGPGTLVRQRTCNR-EPCDGSAHERRSCNVATCQ 861
>Z68011-3|CAA92014.2| 821|Caenorhabditis elegans Hypothetical
protein T21B6.3 protein.
Length = 821
Score = 32.3 bits (70), Expect = 0.34
Identities = 23/62 (37%), Positives = 27/62 (43%), Gaps = 5/62 (8%)
Frame = +2
Query: 491 NYSTPTGRTRPLEYRWS--IERGPCSASCGGGVRLITAQCH-RDQKCPPPRYES--CNTH 655
+Y T P + WS E CSASCG G R T CH +C YES C+
Sbjct: 491 DYETEPCNLGPCQ-TWSEWCEWSTCSASCGSGQRERTRFCHLGTNRCEGKDYESEQCSAG 549
Query: 656 SC 661
C
Sbjct: 550 PC 551
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/33 (39%), Positives = 15/33 (45%)
Frame = +2
Query: 545 ERGPCSASCGGGVRLITAQCHRDQKCPPPRYES 643
E CSASCG G++ C C P ES
Sbjct: 611 EWSTCSASCGSGMKRRQRVCQFGTDCQGPNEES 643
>U41554-3|AAA83298.2| 745|Caenorhabditis elegans Nematode astacin
protease protein38 protein.
Length = 745
Score = 32.3 bits (70), Expect = 0.34
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Frame = +2
Query: 536 WSIERGPCSASCGG-GVRLITAQCHRDQKCPPPRYESCNTHSC 661
WS +G CS CGG G RL +C + + C CN +C
Sbjct: 634 WSEWQGECSQQCGGCGHRLRKREC-KKEACRKEEKRPCNFSAC 675
>U28742-3|AAA68333.3| 837|Caenorhabditis elegans Hypothetical
protein T20B5.3 protein.
Length = 837
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 173 RDKPILELSKHSKKFDISSLQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITA 352
R KP++ + H+ +D+ + P + ++++I E S +L + RYE +
Sbjct: 229 RRKPLIWDNLHANDYDLKKIF-----MGPMMHRSVKIKEFTSGLLS-NPNGRYEANFVPF 282
Query: 353 GTLLRWNQTDTDI 391
TL WN D D+
Sbjct: 283 HTLSDWNAADRDL 295
>DQ407523-1|ABD85015.1| 856|Caenorhabditis elegans OGA-1c protein.
Length = 856
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 173 RDKPILELSKHSKKFDISSLQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITA 352
R KP++ + H+ +D+ + P + ++++I E S +L + RYE +
Sbjct: 229 RRKPLIWDNLHANDYDLKKIF-----MGPMMHRSVKIKEFTSGLLS-NPNGRYEANFVPF 282
Query: 353 GTLLRWNQTDTDI 391
TL WN D D+
Sbjct: 283 HTLSDWNAADRDL 295
>DQ407522-1|ABD85014.1| 854|Caenorhabditis elegans OGA-1b protein.
Length = 854
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 173 RDKPILELSKHSKKFDISSLQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITA 352
R KP++ + H+ +D+ + P + ++++I E S +L + RYE +
Sbjct: 229 RRKPLIWDNLHANDYDLKKIF-----MGPMMHRSVKIKEFTSGLLS-NPNGRYEANFVPF 282
Query: 353 GTLLRWNQTDTDI 391
TL WN D D+
Sbjct: 283 HTLSDWNAADRDL 295
>DQ407521-1|ABD85013.1| 870|Caenorhabditis elegans OGA-1d protein.
Length = 870
Score = 30.7 bits (66), Expect = 1.0
Identities = 19/73 (26%), Positives = 35/73 (47%)
Frame = +2
Query: 173 RDKPILELSKHSKKFDISSLQDNYLKYDPSVPQNLQIVEMDSNILDLKESFRYEGEAITA 352
R KP++ + H+ +D+ + P + ++++I E S +L + RYE +
Sbjct: 229 RRKPLIWDNLHANDYDLKKIF-----MGPMMHRSVKIKEFTSGLLS-NPNGRYEANFVPF 282
Query: 353 GTLLRWNQTDTDI 391
TL WN D D+
Sbjct: 283 HTLSDWNAADRDL 295
>AC006615-3|AAK68232.1| 1148|Caenorhabditis elegans Hypothetical
protein C36B7.5b protein.
Length = 1148
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 512 RTRPLEYRWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCEFVWG 676
R P W E CS +CG G + +C +C P E C SC + WG
Sbjct: 543 RDCPKWEEWG-EWADCSTTCGQGTQKRLRKCDSGNECSGPGEEMRFCQIASCPY-WG 597
>AC006615-2|AAK68231.1| 1121|Caenorhabditis elegans Hypothetical
protein C36B7.5a protein.
Length = 1121
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/57 (31%), Positives = 23/57 (40%), Gaps = 2/57 (3%)
Frame = +2
Query: 512 RTRPLEYRWSIERGPCSASCGGGVRLITAQCHRDQKCPPPRYES--CNTHSCEFVWG 676
R P W E CS +CG G + +C +C P E C SC + WG
Sbjct: 543 RDCPKWEEWG-EWADCSTTCGQGTQKRLRKCDSGNECSGPGEEMRFCQIASCPY-WG 597
>Z81492-9|CAB04026.2| 805|Caenorhabditis elegans Hypothetical
protein E03H4.4 protein.
Length = 805
Score = 29.5 bits (63), Expect = 2.4
Identities = 27/108 (25%), Positives = 44/108 (40%), Gaps = 11/108 (10%)
Frame = +2
Query: 95 VPHEARQLSIHIATPIPLHIALRERKRDKPILELSKHSK---------KFDISSLQDNYL 247
+P +AR+LS I P + R P+ KH+ K + +++Q +
Sbjct: 176 LPQDARELSQRIFNPYRFYGMDGMWPRGFPLEHFEKHTNGNSSQVLCYKMERAAVQQGLV 235
Query: 248 KYDPSVPQNLQIVEMDSNILDLKESFRYEGEAIT--AGTLLRWNQTDT 385
++DP V +++ D N L F IT GT WN +T
Sbjct: 236 QHDPDVDAIYRLLNADKN-SGLNVEFNKFAPPITLSVGTYSPWNSQNT 282
>Z70682-5|CAA94586.1| 345|Caenorhabditis elegans Hypothetical
protein F08G5.6 protein.
Length = 345
Score = 29.5 bits (63), Expect = 2.4
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = +2
Query: 404 ESRLQTDLMIMAIPVNPTLEDAVSVDVSVNYSTPTGRTRP 523
E D ++ AI PT E V +D SV PT TRP
Sbjct: 288 EKTSNPDCVLKAITSPPTSESKVLLDFSVETQFPTNITRP 327
>Z93778-6|CAB07843.2| 554|Caenorhabditis elegans Hypothetical
protein C31H5.3 protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 254 DPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWNQTDTDIYITSESRLQTDLMI 433
D Q ++E++ +IL + L +D +S S +T I
Sbjct: 363 DNKKKQRQYLIEVERHILTRPNGNGHSAVDKAVHLDLSTGNPHSDAKKSSPSPKRTSASI 422
Query: 434 MAIPVNPTLEDAVSVDVSVNYSTPTGRTRPLE 529
M + PT + ++D S+N T T TRPLE
Sbjct: 423 MGMTGLPTTQMNGALDSSINKYTCTKVTRPLE 454
>AY523514-1|AAR98636.1| 554|Caenorhabditis elegans acetylcholine
receptor (63.2 kD)(acr-19) protein.
Length = 554
Score = 29.1 bits (62), Expect = 3.2
Identities = 24/92 (26%), Positives = 38/92 (41%)
Frame = +2
Query: 254 DPSVPQNLQIVEMDSNILDLKESFRYEGEAITAGTLLRWNQTDTDIYITSESRLQTDLMI 433
D Q ++E++ +IL + L +D +S S +T I
Sbjct: 363 DNKKKQRQYLIEVERHILTRPNGNGHSAVDKAVHLDLSTGNPHSDAKKSSPSPKRTSASI 422
Query: 434 MAIPVNPTLEDAVSVDVSVNYSTPTGRTRPLE 529
M + PT + ++D S+N T T TRPLE
Sbjct: 423 MGMTGLPTTQMNGALDSSINKYTCTKVTRPLE 454
>U23484-9|AAC46771.1| 304|Caenorhabditis elegans Hypothetical
protein EEED8.11 protein.
Length = 304
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 3/43 (6%)
Frame = +3
Query: 135 HRFPSTLHCANGNG---TSRF*NFLSTPKNSTSAPFRTTT*NT 254
HR PS+ H + N T++ STP STS P TTT T
Sbjct: 33 HRPPSSYHGGHHNDDDCTTKPPKSTSTPSTSTSTPTTTTTTTT 75
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,953,564
Number of Sequences: 27780
Number of extensions: 339864
Number of successful extensions: 1106
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 978
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1097
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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