Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0066
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex det... 25 0.52
DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex det... 25 0.52
DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex det... 25 0.52
DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex det... 24 1.6
DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex det... 23 2.1
DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex det... 23 2.1
DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex det... 23 2.1
DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex det... 23 2.1
DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex det... 23 2.1
DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex det... 23 2.1
DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex det... 23 2.1
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 2.1
DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex det... 23 2.8
DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex det... 23 3.7
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein ... 21 8.5
>DQ325113-1|ABD14127.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYLKY 253
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325112-1|ABD14126.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYLKY 253
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325111-1|ABD14125.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYLKY 253
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325110-1|ABD14124.1| 185|Apis mellifera complementary sex
determiner protein.
Length = 185
Score = 25.4 bits (53), Expect = 0.52
Identities = 17/31 (54%), Positives = 19/31 (61%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYLKY 253
RER RD+ E SK K ISSL +NY KY
Sbjct: 64 RERSRDRKERERSKEPK--IISSLSNNY-KY 91
>DQ325105-1|ABD14119.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.52
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYL 247
+ER RDK E SK K ISSL +NY+
Sbjct: 64 KERSRDKRERERSKERKI--ISSLSNNYI 90
>DQ325104-1|ABD14118.1| 180|Apis mellifera complementary sex
determiner protein.
Length = 180
Score = 25.4 bits (53), Expect = 0.52
Identities = 15/29 (51%), Positives = 18/29 (62%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNYL 247
+ER RDK E SK K ISSL +NY+
Sbjct: 64 KERSRDKRERERSKERKI--ISSLSNNYI 90
>DQ325130-1|ABD14144.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325129-1|ABD14143.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325128-1|ABD14142.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325127-1|ABD14141.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325126-1|ABD14140.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325125-1|ABD14139.1| 174|Apis mellifera complementary sex
determiner protein.
Length = 174
Score = 23.8 bits (49), Expect = 1.6
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRTERERSKEPK--IISSLSNNY 89
>DQ325101-1|ABD14115.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325100-1|ABD14114.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325099-1|ABD14113.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325098-1|ABD14112.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325097-1|ABD14111.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325096-1|ABD14110.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>DQ325095-1|ABD14109.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.4 bits (48), Expect = 2.1
Identities = 14/28 (50%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K ISSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IISSLSNNY 89
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.4 bits (48), Expect = 2.1
Identities = 12/49 (24%), Positives = 20/49 (40%)
Frame = +1
Query: 301 HFXXXXXXXXXXXGDHGWDSSALESNRHRHLYNVRI*TANRFDDNGNTS 447
HF G H W+ + + ++H + R TA +F N T+
Sbjct: 690 HFQVNQSHGIKRSGSHSWEGDSFKVSKHEEV--SRTSTAGQFPTNVATT 736
>DQ325102-1|ABD14116.1| 183|Apis mellifera complementary sex
determiner protein.
Length = 183
Score = 23.0 bits (47), Expect = 2.8
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E SK K +SSL +NY
Sbjct: 64 KERSRDRRERERSKEPK--IVSSLSNNY 89
>DQ325103-1|ABD14117.1| 182|Apis mellifera complementary sex
determiner protein.
Length = 182
Score = 22.6 bits (46), Expect = 3.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +2
Query: 161 RERKRDKPILELSKHSKKFDISSLQDNY 244
+ER RD+ E S+ K ISSL +NY
Sbjct: 64 KERSRDRTERERSREPK--IISSLSNNY 89
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/18 (50%), Positives = 13/18 (72%)
Frame = +2
Query: 188 LELSKHSKKFDISSLQDN 241
LEL K S++ D+S+ Q N
Sbjct: 159 LELEKQSEQGDVSNYQAN 176
>AY338499-1|AAR08420.1| 500|Apis mellifera Kruppel-like protein 1
protein.
Length = 500
Score = 21.4 bits (43), Expect = 8.5
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = +2
Query: 122 IHIATPIPLHIALRERKRDKPILELSKHSKKFDISSLQDN 241
+ +A P+ + L RKR K ILE + + I+S + N
Sbjct: 452 LDLAIPVRETLILPPRKRCKMILESMEIERNGLIASQRQN 491
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 190,247
Number of Sequences: 438
Number of extensions: 3996
Number of successful extensions: 30
Number of sequences better than 10.0: 24
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -