Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0064
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical... 123 1e-28
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 122 2e-28
Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical pr... 83 1e-16
AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical ... 77 9e-15
U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical pr... 70 1e-12
Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical pr... 58 6e-09
U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical pr... 52 4e-07
Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical pr... 48 5e-06
Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical pr... 45 6e-05
Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical pr... 43 2e-04
Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical pr... 42 6e-04
U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical pr... 41 7e-04
AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical ... 41 7e-04
Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical pr... 40 0.001
Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical pr... 37 0.012
U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical pr... 37 0.016
AC006607-3|AAK68172.1| 408|Caenorhabditis elegans Prion-like-(q... 28 5.6
U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical pr... 28 7.4
U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical pr... 27 9.8
>AC084153-14|AAK84588.1| 264|Caenorhabditis elegans Hypothetical
protein Y22D7AL.14 protein.
Length = 264
Score = 123 bits (296), Expect = 1e-28
Identities = 63/189 (33%), Positives = 99/189 (52%), Gaps = 2/189 (1%)
Frame = +3
Query: 3 VAAPXAIVDVSYDVQQINNYVDYVNIMTYDYHYYTKYT-PFTGFNSPLFSRPSESLYMGT 179
V+ P I +YDV + Y D V IM YD+H + +Y+ PF GFN+PL +E +G
Sbjct: 63 VSGPPTISRKAYDVDALKMYADMVQIMNYDFHVFNRYSNPFVGFNAPLHPMRAEISVLGE 122
Query: 180 LNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPASGYGSLGSLGFVNYP 359
+N ++ + + GL R+ GIPTY +F L+ SPA N P
Sbjct: 123 MNAEASMKTWYDLGLPRNISFFGIPTYARAFQLLTHYLHKPYSPA----IRARPEITNLP 178
Query: 360 DVCLFVANSNVRVIFDDHAKVPYLYKQKE-WTSFDSAHSVMEKAKYIKDNRLRGAMVYSL 536
DVC+F + +++ HA+ PYLY W S+++ S++ K + + ++ G MV+S+
Sbjct: 179 DVCIFAQSGYYTTVWNHHAQAPYLYGDDGIWVSYENQQSILAKMAFARKLQVGGVMVFSI 238
Query: 537 NADDYEGKC 563
+DD GKC
Sbjct: 239 GSDDVTGKC 247
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 122 bits (295), Expect = 2e-28
Identities = 70/210 (33%), Positives = 110/210 (52%), Gaps = 3/210 (1%)
Frame = +3
Query: 3 VAAPXAIVDVSYDVQQINNYVDYVNIMTYDYHYYTKYTPFTGFNSPLFSRPSESLYMGTL 182
VAA A +D YD+ + D++ +M+YD+ + + GFNSPL++
Sbjct: 219 VAAGPATIDAGYDIPNLAPNFDFILLMSYDF--FGAWASLVGFNSPLYATTELPAEWNGW 276
Query: 183 NVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNAD--NPNI-GSPASGYGSLGSLGFVN 353
NV+ + + KG+ ++KI+VG+PTYG +TL NA NP GSPA + G
Sbjct: 277 NVDSSARYWNQKGMPKEKIIVGMPTYGRGWTLNNASAINPGTSGSPAKITQYVQEAGVGA 336
Query: 354 YPDVCLFVANSNVRVIFDDHAKVPYLYKQKEWTSFDSAHSVMEKAKYIKDNRLRGAMVYS 533
Y + C +AN R +D ++VPYL + +W S+D S K Y+K GA V++
Sbjct: 337 YFEFCEMLANGATR-YWDSQSQVPYLVQGNQWWSYDDEESFANKMAYVKREGYGGAFVWT 395
Query: 534 LNADDYEGKCTSKTNNTILFPLVQSIRDTL 623
L+ DD+ C++ +N L+PL+ I L
Sbjct: 396 LDFDDFNAGCSN--SNGQLYPLISVIAKEL 423
>Z66524-7|CAA91419.2| 626|Caenorhabditis elegans Hypothetical
protein T13H5.3 protein.
Length = 626
Score = 83.4 bits (197), Expect = 1e-16
Identities = 57/195 (29%), Positives = 103/195 (52%), Gaps = 11/195 (5%)
Frame = +3
Query: 6 AAPXAIVDVSYDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPL-FSRPSESLYMG 176
AA ++ YD+QQ+ Y D+VN+M+YDY + +K+ +TG +PL F+ P + + G
Sbjct: 190 AAGHWVLKPGYDLQQLMKYCDFVNVMSYDYFGAWASKWGAYTGPPAPLQFAMPKK--FSG 247
Query: 177 TLNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVN---ADNPNIGSPASGYGSLGSL-- 341
+NV+ T+ Y + DKI +G+P YG + V ++ A+ S G+
Sbjct: 248 RMNVHATMKDYSCQIKATDKINMGVPFYGRFWKNVGDAVDSTDDMWRTATATNSEGTKFE 307
Query: 342 -GFVNYPDVCLFVANSNVRVIFDDHAKVPYLY--KQKEWTSFDSAHSVMEKAKYIKDNRL 512
G V + D L + F +K P+++ +QK + +++A S+ K YI +N +
Sbjct: 308 GGDVQWRD--LHEKFDTTKTKFHSGSKTPFIWLSEQKTFVGYENAESLKHKVDYIVENNI 365
Query: 513 RGAMVYSLNADDYEG 557
G M+++++ DD +G
Sbjct: 366 GGVMIWAIDFDDDQG 380
>AF016419-9|AAG24054.1| 2025|Caenorhabditis elegans Hypothetical
protein F07G11.9 protein.
Length = 2025
Score = 77.4 bits (182), Expect = 9e-15
Identities = 48/178 (26%), Positives = 90/178 (50%), Gaps = 7/178 (3%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMY 209
YD++ I Y D++N+MTYDY+ + +K+ +TG +PL+ + + G LN ++++ Y
Sbjct: 1669 YDLKGILKYADFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKG-FSGKLNADFSMKFY 1727
Query: 210 LNKGLDRDKIVVGIPTYGHSFTLVNA---DNPNIGSPASGYGSLGSLGFVNYPDVCLFVA 380
K ++ +G+P YG + V + N+ A+ G+V + ++
Sbjct: 1728 ACKTEKPSQLNMGVPFYGRYWKNVLGPIDKSDNMWRTAAPQNGKYEGGYVGWRNLAKEGW 1787
Query: 381 NSNVRVIFDDHAKVPYLYKQ--KEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADD 548
N + + K PY+ K++ F++ S+ EK KY D L G M+++L+ DD
Sbjct: 1788 NKG-SASWHEKTKTPYIMNNGAKKFLGFENERSLKEKMKYATDRNLGGLMIWALDLDD 1844
>U70858-7|AAB09177.1| 1484|Caenorhabditis elegans Hypothetical protein
T01C4.1 protein.
Length = 1484
Score = 70.1 bits (164), Expect = 1e-12
Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 7/178 (3%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMY 209
YD++ I NY D++N+MTYDY+ + +K+ +TG +PL+ + + G LN ++++ Y
Sbjct: 1132 YDLKGILNYADFINVMTYDYYGAWESKWGAYTGTPAPLYFGSLKG-FSGKLNADFSMKFY 1190
Query: 210 LNKGLDRDKIVVGIPTYGHSF--TLVNAD-NPNIGSPASGYGSLGSLGFVNYPDVCLFVA 380
++ +G+P YG + L D + N+ A+ G+V + ++
Sbjct: 1191 ACNTKKPSQLTMGVPFYGRYWKNVLEPIDASDNMWRTAAPQNGKYEGGYVGWRNLEKEGW 1250
Query: 381 NSNVRVIFDDHAKVPYLYKQ--KEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADD 548
N + K PY+ + + F++ S+ EK Y + L G M+++L+ DD
Sbjct: 1251 NKG-SATWHKKTKTPYIMNNGARMFLGFENERSLKEKMDYATNRNLGGLMIWALDLDD 1307
>Z54342-8|CAA91152.1| 459|Caenorhabditis elegans Hypothetical
protein C08H9.13 protein.
Length = 459
Score = 58.0 bits (134), Expect = 6e-09
Identities = 44/188 (23%), Positives = 93/188 (49%), Gaps = 6/188 (3%)
Frame = +3
Query: 3 VAAPXAIVDVSYDVQQ--INNYVDYVNIMTYDYHYYTKYTPFTGFNSPLFSRPSESLYMG 176
+ P + D+ Y ++ + +YVD++N++TY Y Y P++G N F P+ LY G
Sbjct: 251 IIVPSSPSDLEYYLRMDGLLHYVDFLNVLTYGY-----YAPWSGVNGK-FVGPNAPLYGG 304
Query: 177 TL-NVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPN-IGSPASGYGSLGSLGFV 350
NV+ T+ + K K+ + + YG + VN + P+ + A FV
Sbjct: 305 NRENVDETMQYLICKTRTPSKLNMALSFYGRYWENVNDNVPDEMFKEADLINGKAQGMFV 364
Query: 351 NYPDVCLFVANSNVRVIFDDHAKVPYLY--KQKEWTSFDSAHSVMEKAKYIKDNRLRGAM 524
+ ++ + + ++ + ++PY++ +++++ F++ S+ K Y D+ + G
Sbjct: 365 AWKNLAGRGWDKS-EALWHEETQIPYIWNSEERKFFVFENERSLQAKMDYAADHNIGGVY 423
Query: 525 VYSLNADD 548
+++L ADD
Sbjct: 424 IWALGADD 431
>U61950-3|AAC24288.1| 469|Caenorhabditis elegans Hypothetical
protein C45E5.2 protein.
Length = 469
Score = 52.0 bits (119), Expect = 4e-07
Identities = 46/182 (25%), Positives = 82/182 (45%), Gaps = 9/182 (4%)
Frame = +3
Query: 36 YDVQQINNYVDYVNI--MTYDYHYYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMY 209
YD+++I VD+VN+ M Y + ++ TG ++PL+ +V+YT+ Y
Sbjct: 170 YDIEEIIERVDFVNVYSMNYAAPWSNQWGTPTGPSAPLYGGLDA---RRKFSVDYTMKYY 226
Query: 210 LNKGLDRDKIVVGIPTY-GHSFTLVNADNPNI----GSPASGYGSLGSLGFVNYPDVCLF 374
+ +K + IP Y H + NA P I G++G + +
Sbjct: 227 IRYTRKPEKFNLIIPFYVRHWRNVENAIKPGIEVFRNVTLQNNGAIGEVYMSRWTAESDG 286
Query: 375 VANSNVRVIFDDHAKVPYLYK--QKEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADD 548
+ SN +DD K Y++K K + +F++ S+ KA Y+K L G ++ + DD
Sbjct: 287 IELSNPS--WDDTTKTLYIWKPETKTFITFETEKSIEAKANYVKSMNLGGVWIWLMENDD 344
Query: 549 YE 554
+
Sbjct: 345 QD 346
>Z70035-1|CAA93861.1| 432|Caenorhabditis elegans Hypothetical
protein R09D1.1 protein.
Length = 432
Score = 48.4 bits (110), Expect = 5e-06
Identities = 50/199 (25%), Positives = 93/199 (46%), Gaps = 17/199 (8%)
Frame = +3
Query: 3 VAAPXAIVDV---SYDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESL 167
+ P A VD+ YD+ +I +++D++N+ + DY + K+ TG ++P+
Sbjct: 217 ILLPPAGVDIWEMGYDLDEIIDHIDFMNVYSMDYSGPWDNKWGTPTGPSAPMNYNIGPRK 276
Query: 168 YMGTLNVNYTVNMYLNKGLDRDKIVVGIPTY-------GHSFTL---VNADNPNIGSPAS 317
+ V++T+ Y K +K + IP Y G + TL V + I A
Sbjct: 277 H---FTVDWTMKYYACKTRQPNKFNIVIPFYARIWRSVGEAITLKTEVFRNAKLINGKAD 333
Query: 318 GYGSLGSLGFVNYPDVCLFVANSNVRVIFDDHAKVPYLYKQKEWT--SFDSAHSVMEKAK 491
G + L V + LF + +D+ K Y++K KE T +F++ S+ +K +
Sbjct: 334 GDPYISRLS-VKQKGIELFPYS------WDNATKSSYIWKPKEKTFLTFENERSIEKKLQ 386
Query: 492 YIKDNRLRGAMVYSLNADD 548
Y+ + L G ++S++ DD
Sbjct: 387 YVNEMNLGGVWIWSVDMDD 405
>Z70035-9|CAA93870.2| 450|Caenorhabditis elegans Hypothetical
protein R09D1.10 protein.
Length = 450
Score = 44.8 bits (101), Expect = 6e-05
Identities = 43/192 (22%), Positives = 80/192 (41%), Gaps = 9/192 (4%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMY 209
+D++ I D++NI + DY+ + Y TG SP+++ NV+ + Y
Sbjct: 239 FDIENIVAVADFINIYSMDYYGPWKNPYGNPTGPISPIYNGAQGR---EAYNVHSSALTY 295
Query: 210 LNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPASG-----YGSLGSLGFVNYPDVCLF 374
K K + IP + + V + G +GS F++ V
Sbjct: 296 SCKVKQSKKFNIVIPFFARLWKNVEKPIQHPGREVYRNVHLVHGSAVGESFMSRKSVLEK 355
Query: 375 VANSNVRVIFDDHAKVPYLYKQ--KEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADD 548
N +D+ ++ ++Y KE+ +F++ S+ K Y+KD L G ++ ++ DD
Sbjct: 356 GYKLN-SYSYDELSRSAFIYNSTTKEYLTFETEKSIEAKVNYVKDRALAGVWIWFVDLDD 414
Query: 549 YEGKCTSKTNNT 584
E + N T
Sbjct: 415 EENSLINAVNFT 426
>Z70035-2|CAA93862.1| 440|Caenorhabditis elegans Hypothetical
protein R09D1.2 protein.
Length = 440
Score = 43.2 bits (97), Expect = 2e-04
Identities = 44/192 (22%), Positives = 89/192 (46%), Gaps = 9/192 (4%)
Frame = +3
Query: 3 VAAPXAIVD---VSYDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESL 167
+ P A VD + YD+++I +VD++N+ + DY + ++ TG ++PL
Sbjct: 230 IVLPPAGVDTWELGYDLEEIMEHVDFMNVYSMDYSGPWDNQWGTPTGPSAPLAFNIGP-- 287
Query: 168 YMGTLNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLV-NADNPNIGSPASGYGSLGSLG 344
NV++T+ Y K K + IP Y + V A +P +
Sbjct: 288 -RKNFNVDWTMKYYSCKTQQPGKFNMVIPFYARYWNNVQEAVDPRTEVFRNAEIRNNRAD 346
Query: 345 FVNYPDVCLFVANSNVRVI-FDDHAKVPYLYK--QKEWTSFDSAHSVMEKAKYIKDNRLR 515
V Y D ++++ ++ +D+ PY++K ++ + +F++ S+ K +Y D L
Sbjct: 347 GVPYMD----RSSADYKMASWDNLTSTPYIWKPDERRFFTFENQKSIAIKTRYAIDMNLG 402
Query: 516 GAMVYSLNADDY 551
G ++S++ D+
Sbjct: 403 GVWIWSVDMGDH 414
>Z47745-4|CAA87665.2| 445|Caenorhabditis elegans Hypothetical
protein T19H5.1 protein.
Length = 445
Score = 43.2 bits (97), Expect = 2e-04
Identities = 38/180 (21%), Positives = 82/180 (45%), Gaps = 9/180 (5%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYHYYTK--YTPFTGFNSPLFSR-PSESLYMGTLNVNYTVNM 206
+D+ I VD++N+ + DY+ T+ + TG +P+F+ P T NV++T +
Sbjct: 229 FDMNNIVQIVDFINVFSLDYYGPTQNDFGKITGPTAPMFNGVPGRE----TFNVDHTSKV 284
Query: 207 YLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPASGYGSLGSLGFVNYPDVCLFVANS 386
+ + +K + IP Y + V I + G + V + +
Sbjct: 285 LSCETMQSNKFNIAIPFYTTLWENVQGPIDKIEIFRNVNKVHGKI--VGQSHMSRMIVQQ 342
Query: 387 NVRVI----FDDHAKVPYLYKQ--KEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADD 548
V+ FD+ + ++Y K + +F++ S++ K +Y+ ++ L G +++++ DD
Sbjct: 343 KGFVLTPYSFDNATRNAFIYNSSTKIYLTFETDQSIVAKIEYVSEHLLGGICIWTVDKDD 402
>Z70035-5|CAA93865.2| 429|Caenorhabditis elegans Hypothetical
protein R09D1.5 protein.
Length = 429
Score = 41.5 bits (93), Expect = 6e-04
Identities = 42/194 (21%), Positives = 87/194 (44%), Gaps = 12/194 (6%)
Frame = +3
Query: 3 VAAPXAIVDVSYDVQQINN---YVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESL 167
+ AP A +D +D + ++ Y+D+VN+ + DY+ + ++ TG ++PL+
Sbjct: 214 IVAPQAKMDRRHDGYKFDDFMEYIDFVNVFSMDYYGPWPNQWGTPTGPSAPLYGGIGVKK 273
Query: 168 YMGTLNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNP-NIGSPASGYGSLGSLG 344
+ NV+ T+ Y D K + IP Y + N P + G+ L +
Sbjct: 274 H---FNVDSTMKYYTCMTEDPSKFNMVIPFYVRLWK--NVKEPISSGTEVFRRADLKNGA 328
Query: 345 FVNYPDVCLFVANSN----VRVIFDDHAKVPYLYKQK--EWTSFDSAHSVMEKAKYIKDN 506
V + + + ++DD K PY++ Q+ + +F++ S+ K Y ++
Sbjct: 329 AVGNSYMSRWTVDHEGWELTPALWDDVTKTPYVWNQETGNFLTFENKKSIEAKLAYAIEH 388
Query: 507 RLRGAMVYSLNADD 548
L G ++ ++ D+
Sbjct: 389 NLGGVWIHLVDKDN 402
>U61958-2|AAB03182.3| 1067|Caenorhabditis elegans Hypothetical protein
C25A8.4 protein.
Length = 1067
Score = 41.1 bits (92), Expect = 7e-04
Identities = 38/190 (20%), Positives = 85/190 (44%), Gaps = 5/190 (2%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYHYYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMYLN 215
YD + +N I+ + + ++ PFTG SPL R + S+ ++ ++ ++
Sbjct: 532 YDYEHLNKTASL--IVLHSHRLHSDSLPFTGHPSPL--RATSSMTNQKMSWESLLSHWVE 587
Query: 216 KGLDRDKIVVGIPTYGHSFTLVNADNPNIGSP--ASGYGSL--GSLGFV-NYPDVCLFVA 380
K + K+V+ + S + + +P S + S+ G + + ++C +
Sbjct: 588 KRVLPSKLVLSLSASTLSMQSLADVRSSAATPFGQSAFVSMLRSKKGDIHSQQEICESLK 647
Query: 381 NSNVRVIFDDHAKVPYLYKQKEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLNADDYEGK 560
+ + D A+VPYL + + ++++ S KA + + G +++++ DD
Sbjct: 648 SGTGVTHWVDGAEVPYLRRYDQMVAYENTRSAHIKAVWASMEGVGGLALHNMHQDDPSAV 707
Query: 561 CTSKTNNTIL 590
C ++T IL
Sbjct: 708 CDNRTAFPIL 717
>AF098997-6|AAC68716.1| 410|Caenorhabditis elegans Hypothetical
protein T10D4.3 protein.
Length = 410
Score = 41.1 bits (92), Expect = 7e-04
Identities = 45/199 (22%), Positives = 94/199 (47%), Gaps = 17/199 (8%)
Frame = +3
Query: 3 VAAPXAIV---DVSYDVQQINNYVDYVNIMTYDYH--YYTKYTPFTGFNSPLFSRPSESL 167
VA P A V ++ YD++ I+++VD+ N+ + DY+ + ++ TG SPL+ P+
Sbjct: 196 VAVPQAEVSNLELGYDLRTISSHVDFFNVHSMDYYGPWPNEWGKPTGPISPLYG-PTRH- 253
Query: 168 YMGTLNVNYTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPAS-GYGSLGSLG 344
NV++T+ Y K + K+ + IP + + N+ P G +
Sbjct: 254 -----NVDWTLRYYAEKTGEPGKLNMVIPFFVRLW-------KNVPEPVEPGRQVFRDVE 301
Query: 345 FV-NYPDVCLFVANSNVR--------VIFDDHAKVPYLYK--QKEWTSFDSAHSVMEKAK 491
V N P +++ + + +D+ + Y + + + +F++ S+ EK K
Sbjct: 302 LVDNKPQGEAYMSRWSAQHEELDLSPADWDEETRSSYTWNPDTRNFVTFETDKSIQEKMK 361
Query: 492 YIKDNRLRGAMVYSLNADD 548
Y+K+ L G ++ ++A++
Sbjct: 362 YVKEKNLGGVWIWHVDANE 380
>Z83116-5|CAB05568.2| 450|Caenorhabditis elegans Hypothetical
protein M01B2.6 protein.
Length = 450
Score = 40.3 bits (90), Expect = 0.001
Identities = 42/187 (22%), Positives = 81/187 (43%), Gaps = 12/187 (6%)
Frame = +3
Query: 36 YDVQQINNYVDYVNIMTYDYHYYTKYTPF-TGFNSPLFSRPSESLYMGT-----LNVNYT 197
+ + +I VD++NI DY Y P+ +G+ +P + P +Y G+ NV+ T
Sbjct: 246 FKMNEIVENVDFINIFAMDY-----YGPWASGWGNP--TGPISPIYGGSERREQWNVDNT 298
Query: 198 VNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPASGYGSL---GSLGFVNYPDVC 368
+Y + + K + IP + + V G +L ++G V P
Sbjct: 299 AAIYSCETMRSSKFNIVIPFFARLWNNVGKPIDFPGKEVYRNVTLIDGKAVGEVYMPRRS 358
Query: 369 LFVANSNVRVI-FDDHAKVPYLYKQ--KEWTSFDSAHSVMEKAKYIKDNRLRGAMVYSLN 539
N+ +DD ++ ++Y KE+ +F+ S+ K Y+++ L G ++ ++
Sbjct: 359 ALQKGYNLSSYNYDDLSETAFIYNSTTKEYLTFEVKRSIAAKLDYVQNMNLGGVWIWQMD 418
Query: 540 ADDYEGK 560
DD K
Sbjct: 419 MDDESDK 425
>Z70035-4|CAA93864.2| 410|Caenorhabditis elegans Hypothetical
protein R09D1.4 protein.
Length = 410
Score = 37.1 bits (82), Expect = 0.012
Identities = 24/80 (30%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Frame = +3
Query: 27 DVSYDVQQINNYVDYVNIMTYDYHYYTKYTPFTGFNSPLFS-RPSESLYMGTLNVNYTVN 203
+ Y + I YVD+VN+ T D YY TG SPL+S + L + + N +
Sbjct: 250 EAGYSIPDILKYVDFVNVFTMD--YYGPSDGSTGPLSPLYSGHLDKKLNVADADENSEES 307
Query: 204 MYLN-KGLDRDKIVVGIPTY 260
Y++ K + ++KI + +P++
Sbjct: 308 AYMSRKTVAKEKIRLTLPSW 327
>U61950-2|AAC24286.1| 266|Caenorhabditis elegans Hypothetical
protein C45E5.3 protein.
Length = 266
Score = 36.7 bits (81), Expect = 0.016
Identities = 25/89 (28%), Positives = 45/89 (50%), Gaps = 5/89 (5%)
Frame = +3
Query: 3 VAAPXAIVDV---SYDVQQINNYVDYVNIMTYDY--HYYTKYTPFTGFNSPLFSRPSESL 167
V AP A ++ YD+++I +VD+VN+ + DY + ++ TG ++PL+
Sbjct: 92 VGAPPAGIENLEDGYDIEEIIRHVDFVNVYSMDYAGPWDNQWGTPTGPSAPLYGGLDA-- 149
Query: 168 YMGTLNVNYTVNMYLNKGLDRDKIVVGIP 254
NV+YT+ Y+ +K + IP
Sbjct: 150 -RRNFNVDYTIKSYIRNIRRPEKFNLAIP 177
>AC006607-3|AAK68172.1| 408|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 10
protein.
Length = 408
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/59 (25%), Positives = 30/59 (50%)
Frame = +3
Query: 87 YDYHYYTKYTPFTGFNSPLFSRPSESLYMGTLNVNYTVNMYLNKGLDRDKIVVGIPTYG 263
Y Y Y + Y+ ++G+N P+ S + MG++ T+ + G++ + G T+G
Sbjct: 29 YPYDYSSMYSGYSGYN-PMMSMSNTMGSMGSMGSLGTLGSMGSMGMNTMGMNTGFGTFG 86
>U41545-7|AAK39136.1| 687|Caenorhabditis elegans Hypothetical
protein C02F12.8 protein.
Length = 687
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/40 (37%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 126 GFNSPLFSRPSESLYMG-TLNVNYTVNMYLNKGLDRDKIV 242
GF+SP+F PS S Y G N + +Y N G+ ++V
Sbjct: 223 GFSSPIFPSPSYSQYSGPPANEGFPDIIYDNNGVAYCRVV 262
>U58761-6|AAB00716.1| 312|Caenorhabditis elegans Hypothetical
protein C01F1.2 protein.
Length = 312
Score = 27.5 bits (58), Expect = 9.8
Identities = 31/113 (27%), Positives = 43/113 (38%), Gaps = 4/113 (3%)
Frame = +3
Query: 192 YTVNMYLNKGLDRDKIVVGIPTYGHSFTLVNADNPNIGSPA-SGYGSLGSLGFVNYPDVC 368
Y + L++ K G G + L+N D GS G L GF N PD+C
Sbjct: 115 YIKKIRLDEREKHRKQTAGKARIGGEWELMNTDGKMEGSQELRGNWLLMYFGFTNCPDIC 174
Query: 369 LFVANSNVRVIFDDHAKVPYLYKQKEWTSFD-SAHSVMEKAKYIKD--NRLRG 518
V+V+ AK + S D SV +Y + N+LRG
Sbjct: 175 PDEIEKMVKVVEIIEAKKDATPIVPVFISVDPERDSVARVKEYCSEFSNKLRG 227
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,801,213
Number of Sequences: 27780
Number of extensions: 333162
Number of successful extensions: 804
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 768
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 795
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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