Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0064
(700 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 23 2.8
AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase pro... 23 2.8
EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein. 23 3.7
DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like recept... 23 3.7
DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GP... 22 4.9
AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein... 22 4.9
AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein... 22 4.9
DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein pr... 22 6.4
AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter... 22 6.4
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 21 8.5
AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein. 21 8.5
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 21 8.5
AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein. 21 8.5
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 23.0 bits (47), Expect = 2.8
Identities = 7/13 (53%), Positives = 12/13 (92%)
Frame = +3
Query: 180 LNVNYTVNMYLNK 218
+N++YT+ MYLN+
Sbjct: 78 VNMDYTITMYLNQ 90
>AB253415-1|BAE86926.1| 588|Apis mellifera alpha-glucosidase
protein.
Length = 588
Score = 23.0 bits (47), Expect = 2.8
Identities = 9/29 (31%), Positives = 13/29 (44%)
Frame = +2
Query: 248 NTNIWTFIYSSECRQPKYWQSSFRLRISR 334
NT I+ + CR P W +S S+
Sbjct: 400 NTTIYKYDVRDGCRTPFQWDNSINAGFSK 428
>EF117814-1|ABO38437.1| 570|Apis mellifera cryptochrome 2 protein.
Length = 570
Score = 22.6 bits (46), Expect = 3.7
Identities = 9/21 (42%), Positives = 14/21 (66%)
Frame = -1
Query: 184 LSVPMYKLSEGLENNGELKPV 122
+S +YKL E +E NG+ P+
Sbjct: 146 VSHTLYKLDEIIERNGDKPPL 166
>DQ869051-1|ABJ09598.1| 581|Apis mellifera pyrokinin-like receptor
2 protein.
Length = 581
Score = 22.6 bits (46), Expect = 3.7
Identities = 6/20 (30%), Positives = 14/20 (70%)
Frame = -3
Query: 77 VNIVYIIINLLHIVGNINYC 18
+ ++Y +I + +VGN++ C
Sbjct: 56 ITVIYAVIFVTGLVGNVSTC 75
>DQ201783-1|ABB05503.1| 381|Apis mellifera capa receptor-like GPCR
protein.
Length = 381
Score = 22.2 bits (45), Expect = 4.9
Identities = 9/20 (45%), Positives = 13/20 (65%)
Frame = -3
Query: 77 VNIVYIIINLLHIVGNINYC 18
+ I+Y+II + I GNI C
Sbjct: 43 LTIIYMIIFVTGIFGNITTC 62
>AY273778-1|AAP33487.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 330 EIRSLKLDCQYLGCLHSL 277
++R +K+D LGCL S+
Sbjct: 322 KMREMKMDRTELGCLRSI 339
>AF263459-1|AAF73057.1| 427|Apis mellifera ultraspiracle protein
protein.
Length = 427
Score = 22.2 bits (45), Expect = 4.9
Identities = 8/18 (44%), Positives = 13/18 (72%)
Frame = -2
Query: 330 EIRSLKLDCQYLGCLHSL 277
++R +K+D LGCL S+
Sbjct: 322 KMREMKMDRTELGCLRSI 339
>DQ011228-1|AAY63897.1| 486|Apis mellifera Amt-2-like protein
protein.
Length = 486
Score = 21.8 bits (44), Expect = 6.4
Identities = 8/20 (40%), Positives = 12/20 (60%)
Frame = -1
Query: 580 LFVLLVHFPS*SSAFNEYTI 521
LFV++ HF FN +T+
Sbjct: 290 LFVVIFHFAHPREEFNHWTV 309
>AY395073-1|AAQ96729.1| 203|Apis mellifera GABA neurotransmitter
transporter-1A protein.
Length = 203
Score = 21.8 bits (44), Expect = 6.4
Identities = 6/8 (75%), Positives = 8/8 (100%)
Frame = -2
Query: 384 CWLQISKH 361
CWLQ++KH
Sbjct: 121 CWLQMTKH 128
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 21.4 bits (43), Expect = 8.5
Identities = 7/20 (35%), Positives = 10/20 (50%)
Frame = +1
Query: 475 SWRRQNI*KTIDYEVLWCIH 534
SW N K +D +WC +
Sbjct: 938 SWVSDNAHKVVDASDVWCYY 957
>AY703618-1|AAU12614.1| 136|Apis mellifera wingless protein.
Length = 136
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 501 LLYILPSP*HCELSQMRSILSVY 433
L+Y+ PSP CE + IL +
Sbjct: 77 LVYLEPSPPFCEKNPKLGILGTH 99
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 21.4 bits (43), Expect = 8.5
Identities = 6/9 (66%), Positives = 7/9 (77%)
Frame = +2
Query: 239 SCWNTNIWT 265
+CW T IWT
Sbjct: 55 NCWVTQIWT 63
>AY222546-1|AAP69221.1| 135|Apis mellifera wingless protein.
Length = 135
Score = 21.4 bits (43), Expect = 8.5
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -2
Query: 501 LLYILPSP*HCELSQMRSILSVY 433
L+Y+ PSP CE + IL +
Sbjct: 78 LVYLEPSPPFCEKNPKLGILGTH 100
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 192,383
Number of Sequences: 438
Number of extensions: 4139
Number of successful extensions: 15
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 21439440
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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