Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0061
         (600 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory recept...    24   0.85 
AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory recept...    24   0.85 
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    24   0.85 
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.6  
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    21   7.9  
AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    21   7.9  

>AM292383-1|CAL23195.2|  320|Tribolium castaneum gustatory receptor
           candidate 62 protein.
          Length = 320

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 477 YSDLYSYDYFLT*N*KR*FNSLKLPVCLSHTFK*ARPGKTTSRGNQT 337
           ++D++ + + L       F SL++ V L H F  +RP   T   N T
Sbjct: 195 FNDIFGWPFLLLIT----FTSLQIMVYLQHIFVKSRPSPATIISNVT 237


>AM292358-1|CAL23170.2|  331|Tribolium castaneum gustatory receptor
           candidate 37 protein.
          Length = 331

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 477 YSDLYSYDYFLT*N*KR*FNSLKLPVCLSHTFK*ARPGKTTSRGNQT 337
           ++D++ + + L       F SL++ V L H F  +RP   T   N T
Sbjct: 195 FNDIFGWPFLLLIT----FTSLQIMVYLQHIFVKSRPSPATIISNVT 237


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 24.2 bits (50), Expect = 0.85
 Identities = 14/47 (29%), Positives = 23/47 (48%)
 Frame = -1

Query: 477 YSDLYSYDYFLT*N*KR*FNSLKLPVCLSHTFK*ARPGKTTSRGNQT 337
           ++D++ + + L       F SL++ V L H F  +RP   T   N T
Sbjct: 515 FNDIFGWPFLLLIT----FTSLQIMVYLQHIFVKSRPSPATIISNVT 557


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 9/20 (45%), Positives = 14/20 (70%)
 Frame = -3

Query: 202 DIIAYSLTIWQVYLIYNVLI 143
           +I+A SLT + VY+  N+ I
Sbjct: 48  NIVAVSLTAYMVYITTNLRI 67


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 9/27 (33%), Positives = 13/27 (48%)
 Frame = -1

Query: 396 LSHTFK*ARPGKTTSRGNQTDPLILPV 316
           L+H  K   PG+ T +   T   + PV
Sbjct: 768 LNHEIKKVIPGRITQKSCSTKRYVTPV 794


>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 21.0 bits (42), Expect = 7.9
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +3

Query: 21  FFKEKGTYCIN 53
           FFKE   YC N
Sbjct: 69  FFKEASLYCFN 79


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 116,509
Number of Sequences: 336
Number of extensions: 2314
Number of successful extensions: 9
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)