BLASTX 2.2.12 [Aug-07-2005] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= brP-0059 (613 letters) Database: rice 37,544 sequences; 14,793,348 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value 11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496,624... 248 2e-66 03_02_0897 - 12239375-12239458,12240035-12240116,12240213-122407... 246 8e-66 05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522,408... 237 7e-63 10_08_0141 + 15159160-15159306,15159708-15159815,15159958-151600... 31 0.72 05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613,287... 31 0.95 07_03_1509 - 27246721-27247350 29 2.2 09_03_0039 + 11799277-11799486,11799565-11799710,11800758-118008... 29 2.9 09_06_0320 - 22297579-22297760,22298433-22299358,22299422-222997... 28 5.1 10_08_0840 + 20945899-20946085,20946369-20946478,20946857-20947369 28 6.7 12_02_0957 + 24807261-24807311,24807436-24807773,24808727-248089... 27 8.9 10_08_1058 + 22608852-22609172,22609257-22610651 27 8.9 09_06_0319 - 22293869-22293906,22294539-22295808 27 8.9 08_02_0567 + 18769742-18769790,18769928-18771351 27 8.9 06_02_0084 - 11547820-11548773 27 8.9 >11_01_0740 + 6243517-6243526,6244822-6245323,6245415-6245496, 6245741-6245821 Length = 224 Score = 248 bits (608), Expect = 2e-66 Identities = 116/175 (66%), Positives = 136/175 (77%) Frame = +3 Query: 3 RIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRL 182 RI+D+G K+ VD+FP CVHLVS E E +SSEALEA RI CNKY+ KN GKD FH+R+R+ Sbjct: 32 RIYDVGMKKKGVDEFPYCVHLVSWEKENVSSEALEAARIACNKYMTKNAGKDAFHLRVRV 91 Query: 183 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEA 362 HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR + EA Sbjct: 92 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKESNAKHAEEA 151 Query: 363 LRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREXGRLANDGCIVQYRPEHGPL 527 LRRAKFKFPGRQKI S+KWGFTK+ R+E+ KL+ GR+ +DG Q HG L Sbjct: 152 LRRAKFKFPGRQKIIHSRKWGFTKFTREEYVKLKAEGRIMSDGVNAQLLGSHGRL 206 >03_02_0897 - 12239375-12239458,12240035-12240116,12240213-12240714, 12241150-12241303,12241458-12241629,12242237-12242443, 12242926-12243323 Length = 532 Score = 246 bits (603), Expect = 8e-66 Identities = 113/173 (65%), Positives = 135/173 (78%) Frame = +3 Query: 3 RIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRL 182 RIFD+G+K+ + DDFPLCVHLVS E E +SSEALEA RI CNKY+ K+ GKD FH+R+ Sbjct: 339 RIFDVGQKKRSADDFPLCVHLVSWEKENVSSEALEAARIACNKYMAKHAGKDAFHLRVCA 398 Query: 183 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEA 362 HP+HV+RINKMLSCAGADRLQTGMRGAFGKP GT ARVRIGQ ++SVR D A EA Sbjct: 399 HPYHVLRINKMLSCAGADRLQTGMRGAFGKPTGTCARVRIGQVLLSVRCRDANAAHAQEA 458 Query: 363 LRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREXGRLANDGCIVQYRPEHG 521 LRRAKFKFPGRQ++ S KWGFT+++RDE+ KL+ GR+ DG + HG Sbjct: 459 LRRAKFKFPGRQRVIFSAKWGFTRFKRDEYLKLKSEGRIVPDGVNAKLLTRHG 511 >05_01_0490 + 4083768-4083775,4083845-4084336,4084441-4084522, 4086671-4087357,4087555-4087813,4088435-4088558, 4089474-4089564 Length = 580 Score = 237 bits (579), Expect = 7e-63 Identities = 109/163 (66%), Positives = 129/163 (79%) Frame = +3 Query: 3 RIFDLGKKRATVDDFPLCVHLVSDEYEQLSSEALEAGRICCNKYLVKNCGKDQFHIRMRL 182 RI+D+G K+ VD+F CVHLVS E E ++SEALEA RI CNKY+ K+ GKD FH+R+R+ Sbjct: 28 RIYDVGMKKKGVDEFSHCVHLVSWEKENVTSEALEAARIACNKYMTKSAGKDAFHLRVRV 87 Query: 183 HPFHVIRINKMLSCAGADRLQTGMRGAFGKPQGTVARVRIGQPIMSVRSSDRWKAQVIEA 362 HPFHV+RINKMLSCAGADRLQTGMRGAFGKPQGT ARV IGQ ++SVR EA Sbjct: 88 HPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGTCARVDIGQVLLSVRCKPNNAVHASEA 147 Query: 363 LRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREXGRLANDG 491 LRRAKFKFPGRQKI S+KWGFTK+ RDE+ +L+ GR+ DG Sbjct: 148 LRRAKFKFPGRQKIIESRKWGFTKFSRDEYVRLKSEGRIMPDG 190 >10_08_0141 + 15159160-15159306,15159708-15159815,15159958-15160006, 15160067-15160182,15160358-15160399,15161026-15161442, 15162356-15162509,15162911-15162975,15163793-15163870, 15163951-15164061,15164227-15164271,15164677-15164850, 15165383-15166335,15166471-15166681,15167037-15167196, 15168786-15169174 Length = 1072 Score = 31.1 bits (67), Expect = 0.72 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 1/41 (2%) Frame = +3 Query: 33 TVDDFPLC-VHLVSDEYEQLSSEALEAGRICCNKYLVKNCG 152 T D P C +HL SD Y S E ++AG+ C L K G Sbjct: 587 TTDWNPRCDIHLKSDGYTNYSLETVQAGKQQCKAALQKELG 627 >05_01_0367 - 2874429-2874483,2876274-2876345,2876453-2879613, 2879715-2879973,2880060-2880346,2880423-2880758, 2880862-2881003,2881077-2881297,2881379-2881540, 2881617-2881775,2881860-2882159,2882834-2883097, 2883133-2883243,2883902-2883988 Length = 1871 Score = 30.7 bits (66), Expect = 0.95 Identities = 10/31 (32%), Positives = 21/31 (67%) Frame = -1 Query: 313 MGCPMRTRATVP*GLPNAPRIPVWSLSAPAH 221 + CP+ + + VP LP++P P++S ++P + Sbjct: 1625 LSCPLTSPSYVPTSLPHSPTSPIYSATSPIY 1655 >07_03_1509 - 27246721-27247350 Length = 209 Score = 29.5 bits (63), Expect = 2.2 Identities = 18/48 (37%), Positives = 25/48 (52%), Gaps = 5/48 (10%) Frame = +1 Query: 301 LDSPSCPCALVTGGRHRSSRL---CAVP--SSSSPDVKRSTYQRSGVS 429 L P PC RH RL +P +SSSP+++R+T R+G S Sbjct: 132 LQPPLSPCLSAGRRRHHLPRLHDAALIPGITSSSPELRRNTVARAGFS 179 >09_03_0039 + 11799277-11799486,11799565-11799710,11800758-11800860, 11800996-11801182,11801299-11801392,11801530-11801683, 11801963-11802067,11802151-11802267,11802688-11802801, 11803171-11803260,11803875-11804057,11809196-11809550, 11809574-11809643,11809993-11810167,11810251-11810351, 11810390-11810516,11810639-11810716,11811926-11812270 Length = 917 Score = 29.1 bits (62), Expect = 2.9 Identities = 12/42 (28%), Positives = 25/42 (59%) Frame = -3 Query: 572 QIIHEDLSLNLPPSVERSMFRAVLHNAAVISEAAXFTQLLKL 447 QI +D + +LPP ++ + +V+HN + + + + LLK+ Sbjct: 685 QIFFDDRNTSLPPDTRKAAYLSVMHNVSSTNRSG-YDALLKI 725 >09_06_0320 - 22297579-22297760,22298433-22299358,22299422-22299747, 22300591-22300660,22301632-22301726,22301917-22302048, 22302154-22302222,22302953-22303051,22303169-22303253, 22303353-22303453,22303660-22303728,22303861-22303901, 22304085-22304303,22304444-22304470,22304562-22304660, 22304898-22305106,22305382-22305485,22305753-22305894, 22305991-22306289,22306508-22306903 Length = 1229 Score = 28.3 bits (60), Expect = 5.1 Identities = 10/23 (43%), Positives = 17/23 (73%) Frame = +3 Query: 267 GKPQGTVARVRIGQPIMSVRSSD 335 G PQ T+ R+ +G P +S++S+D Sbjct: 1089 GTPQQTLERLHVGHPTLSLQSND 1111 >10_08_0840 + 20945899-20946085,20946369-20946478,20946857-20947369 Length = 269 Score = 27.9 bits (59), Expect = 6.7 Identities = 20/70 (28%), Positives = 33/70 (47%), Gaps = 1/70 (1%) Frame = +3 Query: 342 KAQVIEA-LRRAKFKFPGRQKIYVSKKWGFTKYERDEFEKLREXGRLANDGCIVQYRPEH 518 KA +I+ RR + K+PG QK+ + G K +A+DG ++Q + Sbjct: 151 KAGIIDMQFRRVRCKYPGGQKVTFHVEKGSNPNYLAVLVKF-----VADDGDVIQMDLQE 205 Query: 519 GPLDAWRKVQ 548 L AWR ++ Sbjct: 206 AGLPAWRPMK 215 >12_02_0957 + 24807261-24807311,24807436-24807773,24808727-24808927, 24809024-24809069,24809284-24809600,24809949-24810072, 24810465-24810537,24810968-24811173,24811384-24811651, 24811780-24811877,24812116-24812379 Length = 661 Score = 27.5 bits (58), Expect = 8.9 Identities = 11/34 (32%), Positives = 18/34 (52%) Frame = -1 Query: 139 TRYLLQQIRPASKASELSCSYSSDTKCTHSGKSS 38 +R+ ++ P+ ELSC ++T C H G S Sbjct: 85 SRFKVRIFNPSGCEKELSCVMMNNTPCGHEGSMS 118 >10_08_1058 + 22608852-22609172,22609257-22610651 Length = 571 Score = 27.5 bits (58), Expect = 8.9 Identities = 15/40 (37%), Positives = 20/40 (50%), Gaps = 2/40 (5%) Frame = +1 Query: 457 SCVKXAASL--MTAALCSTARNMDLSTLGGRFRLRSSCII 570 +CV AASL MT MD GGRFR+ + ++ Sbjct: 343 TCVLYAASLGQMTTTFIQQGMAMDTRVFGGRFRVPVASLV 382 >09_06_0319 - 22293869-22293906,22294539-22295808 Length = 435 Score = 27.5 bits (58), Expect = 8.9 Identities = 10/23 (43%), Positives = 15/23 (65%) Frame = +3 Query: 267 GKPQGTVARVRIGQPIMSVRSSD 335 G PQ T+ R+ +G P +S+ S D Sbjct: 343 GTPQPTLERLHVGHPTLSLHSDD 365 >08_02_0567 + 18769742-18769790,18769928-18771351 Length = 490 Score = 27.5 bits (58), Expect = 8.9 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%) Frame = +3 Query: 252 MRGAFGKPQG--TVARVRIGQPIMSVRSSDRW-KAQVIEALRRAKFKFPGRQKI 404 MR G+ G A +RI + I + ++++ +AQV+EA RR F+ PGR ++ Sbjct: 24 MRTNGGEQMGGSEAAHIRIDEIIRRLDAAEKEAQAQVVEA-RREIFRVPGRHRL 76 >06_02_0084 - 11547820-11548773 Length = 317 Score = 27.5 bits (58), Expect = 8.9 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%) Frame = +3 Query: 216 LSCAGADRLQTGMRGAFGK--PQGTVARVRIGQPIMSVRSSDRWK 344 L G DR Q GMRGA P RVR +P R +W+ Sbjct: 133 LGAGGGDRGQLGMRGAADGWWPDWRERRVRWRRPAWRERRGRQWR 177 Database: rice Posted date: Oct 4, 2007 10:57 AM Number of letters in database: 14,793,348 Number of sequences in database: 37,544 Lambda K H 0.318 0.134 0.401 Gapped Lambda K H 0.279 0.0580 0.190 Matrix: BLOSUM62 Gap Penalties: Existence: 9, Extension: 2 Number of Hits to DB: 18,135,441 Number of Sequences: 37544 Number of extensions: 404871 Number of successful extensions: 1187 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 1152 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 1185 length of database: 14,793,348 effective HSP length: 79 effective length of database: 11,827,372 effective search space used: 1466594128 frameshift window, decay const: 40, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 37 (14.9 bits) X3: 62 (25.0 bits) S1: 41 (21.7 bits)
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