Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0059
         (613 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific tran...    25   1.9  
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    24   4.4  
AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 prote...    23   7.8  
AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 prote...    23   7.8  

>AY785360-1|AAV52864.1|  759|Anopheles gambiae male-specific
           transcription factor FRU-MB protein.
          Length = 759

 Score = 25.0 bits (52), Expect = 1.9
 Identities = 14/34 (41%), Positives = 17/34 (50%)
 Frame = +3

Query: 84  QLSSEALEAGRICCNKYLVKNCGKDQFHIRMRLH 185
           +L+ E L  G   CN +  K CGK   HIR   H
Sbjct: 487 RLTFERLSGG---CNLHRCKLCGKVVTHIRNHYH 517


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.8 bits (49), Expect = 4.4
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +1

Query: 310 PSCPCALVTGGRHRSSRLCAVPSSSSPDVKRSTYQRSGVSQSMNVMSLRSCVKXAASLMT 489
           P+ P + +  G    + L  V    +P+ K S   +S + +S+NV+S+      AA  M 
Sbjct: 685 PASPASSIKSGYGEGAPLAIV----APE-KNSV--KSAIVKSINVVSI------AAKTMR 731

Query: 490 AALCSTARNMDLSTLGG 540
              CS+    D S +GG
Sbjct: 732 EGRCSSVSGGDWSPMGG 748


>AY045760-2|AAK84943.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 410 YVDLLTSGELELGT 369
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


>AJ133854-1|CAB39729.1|  169|Anopheles gambiae D7-related 3 protein
           protein.
          Length = 169

 Score = 23.0 bits (47), Expect = 7.8
 Identities = 8/14 (57%), Positives = 13/14 (92%)
 Frame = -3

Query: 410 YVDLLTSGELELGT 369
           YV+LL +G+L++GT
Sbjct: 136 YVELLRAGKLDMGT 149


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 672,874
Number of Sequences: 2352
Number of extensions: 13792
Number of successful extensions: 27
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 59711994
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)