Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0057
(715 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein. 124 8e-29
AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin con... 124 8e-29
AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin co... 116 1e-26
Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical pr... 114 7e-26
S56051-1|AAB25489.2| 147|Caenorhabditis elegans ubiquitin-conju... 114 7e-26
AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin co... 106 1e-23
AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin co... 100 1e-21
AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical... 97 1e-20
Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical p... 94 1e-19
U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin conju... 87 2e-17
AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin con... 81 6e-16
U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin conju... 79 4e-15
AF106565-1|AAC97374.1| 166|Caenorhabditis elegans ubiquitin-con... 79 4e-15
U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin conju... 77 1e-14
AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical ... 69 3e-12
U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2 (c... 66 2e-11
AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin con... 60 1e-09
U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin conju... 60 2e-09
Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical pr... 60 2e-09
U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin conju... 58 8e-09
Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical pr... 57 1e-08
AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin con... 56 3e-08
U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin conju... 52 3e-07
Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical pr... 43 3e-04
U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin conju... 36 0.029
AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical... 36 0.038
U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical pr... 29 3.3
U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical pr... 29 3.3
>U08139-1|AAA83388.1| 192|Caenorhabditis elegans ubc-1 protein.
Length = 192
Score = 124 bits (298), Expect = 8e-29
Identities = 58/126 (46%), Positives = 76/126 (60%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EPN SP N A
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 599 SYLWPE 616
+ L+ E
Sbjct: 127 AQLYQE 132
>AF045638-8|AAC02561.2| 192|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein1 protein.
Length = 192
Score = 124 bits (298), Expect = 8e-29
Identities = 58/126 (46%), Positives = 76/126 (60%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+RL ++ +L G+S P +N+ W I GP ET + +KLSLEF YP
Sbjct: 7 RRLMRDFKKLQEDPPAGVSGAPTEDNILTWEAIIFGPQETPFEDGTFKLSLEFTEEYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP VKF++ FHPNV G ICLDIL+++W+ YDV +L SIQSLL EPN SP N A
Sbjct: 67 PPTVKFISKMFHPNVYADGSICLDILQNRWSPTYDVAAILTSIQSLLDEPNPNSPANSLA 126
Query: 599 SYLWPE 616
+ L+ E
Sbjct: 127 AQLYQE 132
>AC024817-43|AAK93865.2| 151|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein13 protein.
Length = 151
Score = 116 bits (280), Expect = 1e-26
Identities = 57/124 (45%), Positives = 75/124 (60%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+R+ KE L+ GISA P+ N + I GP ++ +AG +KL L P YP A
Sbjct: 7 RRIIKETQRLLADPVPGISANPDESNARYFHVMIAGPDDSPFAGGVFKLELFLPEEYPMA 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
P V+FMT +HPN+D G ICLDILKDKW+ +RTVLLSIQ+LL+ PN + PL
Sbjct: 67 APKVRFMTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPEDPLATDV 126
Query: 599 SYLW 610
+ W
Sbjct: 127 AEQW 130
>Z68337-1|CAA92745.1| 147|Caenorhabditis elegans Hypothetical
protein M7.1 protein.
Length = 147
Score = 114 bits (274), Expect = 7e-26
Identities = 54/116 (46%), Positives = 72/116 (62%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPL 586
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +PN PL
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPL 119
>S56051-1|AAB25489.2| 147|Caenorhabditis elegans
ubiquitin-conjugating enzyme protein.
Length = 147
Score = 114 bits (274), Expect = 7e-26
Identities = 54/116 (46%), Positives = 72/116 (62%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KR+QKEL +L R SA P ++LF W TI GP E+ Y G + L++ FP YP+
Sbjct: 4 KRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFK 63
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPL 586
PP V F T +HPN+++ G ICLDIL+ +W+ + VLLSI SLL +PN PL
Sbjct: 64 PPKVAFTTRIYHPNINSNGSICLDILRSQWSPALTISKVLLSICSLLCDPNPDDPL 119
>AF099919-11|AAC68796.1| 199|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein20 protein.
Length = 199
Score = 106 bits (255), Expect = 1e-23
Identities = 55/118 (46%), Positives = 76/118 (64%), Gaps = 4/118 (3%)
Frame = +2
Query: 242 RLQKELMELM---RCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 412
RLQ+E E++ S+ GI +ENL + G I GP +T YAG + L ++ P+ YP
Sbjct: 8 RLQRECKEVVTNSEISETGIMIEILNENLTEIKGHIRGPPDTPYAGGMFDLDIKIPDQYP 67
Query: 413 YAPPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
++PP VKF T +HPNV + G+ICLDILKD+W A +RTVLLSIQ+L+ P + P
Sbjct: 68 FSPPNVKFSTKIWHPNVSSQTGVICLDILKDQWAASLTLRTVLLSIQALMCTPEPKDP 125
>AC025726-12|AAK73914.3| 243|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein3 protein.
Length = 243
Score = 100 bits (239), Expect = 1e-21
Identities = 55/146 (37%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Frame = +2
Query: 212 KLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 391
K + + L EL L +G + +NLF W I GP +T+Y G +K S+
Sbjct: 4 KASTSSGALRALTMELKNLQSQPVEGFTIDVNEDNLFVWTVGIYGPPKTLYQGGYFKASI 63
Query: 392 EFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK-------------DKWTALYDVRT 532
FP++YPY+PP +KF T +HPNV G +C+ IL ++W VRT
Sbjct: 64 RFPSNYPYSPPSMKFTTKVWHPNVYENGDLCISILHSPIDDPQSGELACERWNPTQSVRT 123
Query: 533 VLLSIQSLLAEPNTQSPLNQQASYLW 610
+LLS+ SLL EPNT SP N AS ++
Sbjct: 124 ILLSVISLLNEPNTSSPANVDASVMY 149
>AL110500-10|CAB60431.1| 170|Caenorhabditis elegans Hypothetical
protein Y87G2A.9 protein.
Length = 170
Score = 96.7 bits (230), Expect = 1e-20
Identities = 50/140 (35%), Positives = 74/140 (52%), Gaps = 14/140 (10%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
KRL E EL +GI A P + +N F+W I GP ET +A + + FP YP
Sbjct: 7 KRLMTEYKELTTRPPEGIIAAPIDEDNFFEWECLITGPEETCFANGVFPARITFPQDYPL 66
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSL 556
+PP ++F FHPN+ G +C+ IL ++W+ + + +LLS+ S+
Sbjct: 67 SPPKMRFTCGIFHPNIYADGRVCISILHAPGDDPTGYELSNERWSPVQSIEKILLSVVSM 126
Query: 557 LAEPNTQSPLNQQASYLWPE 616
LAEPN +SP N A+ +W E
Sbjct: 127 LAEPNDESPANVSAAKMWRE 146
>Z22179-13|CAA80166.1| 164|Caenorhabditis elegans Hypothetical
protein F58A4.10 protein.
Length = 164
Score = 93.9 bits (223), Expect = 1e-19
Identities = 48/138 (34%), Positives = 78/138 (56%), Gaps = 14/138 (10%)
Frame = +2
Query: 245 LQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 421
L+K+L ++ R G SA + +++KW + GP +T+Y G +K L+FP YP P
Sbjct: 8 LKKQLADMRRVPVDGFSAGLVDDNDIYKWEVLVIGPPDTLYEGGFFKAILDFPRDYPQKP 67
Query: 422 PVVKFMTPCFHPNVDTCGLICLDILKD-------------KWTALYDVRTVLLSIQSLLA 562
P +KF++ +HPN+D G +C+ IL D +W ++ V T+LLS+ S+L
Sbjct: 68 PKMKFISEIWHPNIDKEGNVCISILHDPGDDKWGYERPEERWLPVHTVETILLSVISMLT 127
Query: 563 EPNTQSPLNQQASYLWPE 616
+PN +SP N A+ + E
Sbjct: 128 DPNFESPANVDAAKMQRE 145
>U39674-5|AAA80415.2| 229|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein21 protein.
Length = 229
Score = 86.6 bits (205), Expect = 2e-17
Identities = 49/127 (38%), Positives = 67/127 (52%), Gaps = 16/127 (12%)
Frame = +2
Query: 251 KELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVV 430
KE+ ++ GI + NL G I GP T YAG +++ ++ P YP+ PP V
Sbjct: 28 KEVANASDITEAGIHVEIKENNLMDIKGFIKGPEGTPYAGGTFEIKVDIPEHYPFEPPKV 87
Query: 431 ---------------KFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLA 562
KF+T +HPN+ + G ICLDILKDKWTA +RTVLLS+Q++L
Sbjct: 88 TEIIFHIRAFEYIQAKFVTRIWHPNISSQTGTICLDILKDKWTASLTLRTVLLSLQAMLC 147
Query: 563 EPNTQSP 583
P P
Sbjct: 148 SPEPSDP 154
>AC024876-5|AAF60891.2| 221|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein8 protein.
Length = 221
Score = 81.4 bits (192), Expect = 6e-16
Identities = 34/98 (34%), Positives = 57/98 (58%), Gaps = 2/98 (2%)
Frame = +2
Query: 323 KWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLICLDILK 499
++I +GP +T Y +++ ++ P+ YP+ P + F+ FHPN+D G +CLD++
Sbjct: 34 EFIVRFHGPKDTAYENGVWRIRVDMPDKYPFKSPSIGFLNKIFHPNIDEASGTVCLDVIN 93
Query: 500 DKWTALYDVRTVL-LSIQSLLAEPNTQSPLNQQASYLW 610
WTALYD+ + + LL PN PLN +A+ L+
Sbjct: 94 QAWTALYDLTNIFDTFLPQLLTYPNAADPLNGEAARLY 131
>U70849-3|AAK67232.1| 166|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein9 protein.
Length = 166
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +2
Query: 314 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 493
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 494 LKDK--WTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
L + W ++ +L+ IQ LL PN + P +A ++
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIY 137
>AF106565-1|AAC97374.1| 166|Caenorhabditis elegans
ubiquitin-conjugating enzyme 9homolog protein.
Length = 166
Score = 78.6 bits (185), Expect = 4e-15
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 2/101 (1%)
Frame = +2
Query: 314 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 493
NLF W I G +T++ G Y++ + F + +P PP KF P FHPNV G +CL +
Sbjct: 37 NLFNWECAIPGRKDTIWEGGLYRIRMLFKDDFPSTPPKCKFEPPLFHPNVYPSGTVCLSL 96
Query: 494 LKDK--WTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
L + W ++ +L+ IQ LL PN + P +A ++
Sbjct: 97 LDENKDWKPSISIKQLLIGIQDLLNHPNIEDPAQAEAYQIY 137
>U00035-7|AAA50648.2| 153|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein18 protein.
Length = 153
Score = 77.0 bits (181), Expect = 1e-14
Identities = 42/121 (34%), Positives = 61/121 (50%), Gaps = 2/121 (1%)
Frame = +2
Query: 230 AVSKRLQKELMELMRCSDKGISAFP-ESENLFKWIGTINGPLETVYAGHKYKLSLEFPNS 406
+ ++RLQKEL +L C K E NL KW + P + Y +K+ + FP
Sbjct: 2 SATRRLQKELGDLKNCGVKAYENVECEETNLLKWTVLLI-PDKEPYNKGAFKVGITFPVD 60
Query: 407 YPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
YP+ PP V F T +HPNVD G CL I+ + W V++++ SL+ EP P
Sbjct: 61 YPFKPPKVAFETKIYHPNVDEEGKFCLPIVTAENWKPATKTEQVMMALLSLINEPEPSHP 120
Query: 584 L 586
+
Sbjct: 121 I 121
>AL032653-6|CAA21716.1| 152|Caenorhabditis elegans Hypothetical
protein Y54E5B.4 protein.
Length = 152
Score = 68.9 bits (161), Expect = 3e-12
Identities = 44/130 (33%), Positives = 66/130 (50%), Gaps = 4/130 (3%)
Frame = +2
Query: 230 AVSKRLQKELMELMRCSDKG--ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 403
A ++RL KEL +L + +G + S +L +W + G T+YAG + L F
Sbjct: 4 AATRRLMKELAQLKSEAPEGLLVDNTSTSNDLKQWKIGVVGAEGTLYAGEVFMLQFTFGP 63
Query: 404 SYPYAPPVVKFM--TPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQ 577
YP+ P V F+ T HP++ + G ICL IL D WT V++V LSI S+L+ +
Sbjct: 64 QYPFNSPEVMFVGETIPAHPHIYSNGHICLSILSDDWTPALSVQSVCLSILSMLSSSKEK 123
Query: 578 SPLNQQASYL 607
A Y+
Sbjct: 124 KHPIDDAIYV 133
>U13644-3|AAB52677.1| 230|Caenorhabditis elegans Ubiquitin e2
(conjugating enzyme)variant protein 2 protein.
Length = 230
Score = 66.5 bits (155), Expect = 2e-11
Identities = 33/92 (35%), Positives = 55/92 (59%), Gaps = 1/92 (1%)
Frame = +2
Query: 326 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL-KD 502
WI T+ GP + + G +Y++S+ F + +P PP+ +F TP HPNVD G I L +L ++
Sbjct: 71 WICTVPGPRGSPWEGGEYEVSVNF-HKWPIIPPICEFKTPLHHPNVDLRGSIYLKMLEQE 129
Query: 503 KWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
W++ ++ +L I +LLA P+ N +A
Sbjct: 130 HWSSETSLKKLLREISNLLATPDLTQAANIEA 161
>AC024748-1|AAF60411.2| 218|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein15 protein.
Length = 218
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/111 (28%), Positives = 55/111 (49%), Gaps = 2/111 (1%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+RLQK+ +LM+ GI A P +N+ +W + G +T + G Y + F ++P++
Sbjct: 22 RRLQKDYAKLMQDPVDGIKALPNEDNILEWHYCLRGSPDTPFYGGYYWGKVIFKENFPWS 81
Query: 419 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAE 565
PP + +TP F N C L D + W + V +L+ + S + E
Sbjct: 82 PPAITMITPNGRFQTNTRLC-LSISDYHPESWNPGWTVSAILIGLHSFMNE 131
>U41026-5|AAA82352.2| 546|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein23 protein.
Length = 546
Score = 60.1 bits (139), Expect = 2e-09
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Frame = +2
Query: 332 GTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTC-GLICL-DILKDK 505
G I G ET Y G ++L ++ SYP+ P VKF+T +HP+V G ICL D+
Sbjct: 383 GIIKGVEETPYEGGIFELDIKIGESYPFKAPTVKFITKIWHPSVSPFDGTICLHDVDNGV 442
Query: 506 WTALYDVRTVLLSIQSLLAEPNTQSPLN 589
W + VL+ IQS ++ N + P++
Sbjct: 443 WPVSMTIYKVLIVIQSWMSNFNEKEPID 470
>Z66520-3|CAA91389.2| 160|Caenorhabditis elegans Hypothetical
protein F49E12.4 protein.
Length = 160
Score = 59.7 bits (138), Expect = 2e-09
Identities = 42/128 (32%), Positives = 66/128 (51%), Gaps = 7/128 (5%)
Frame = +2
Query: 242 RLQKELMELMRCSDKGISAFPESENL-----FKWIGTINGPLETVYAGHKYKLSLEFPNS 406
R++KE+ +L + + I F + E FK IG +G L Y + L+L+
Sbjct: 17 RIRKEIADLAKNKRRFIKDFRKIEKCKDIFQFKIIG--DGVL---YKNMIFTLTLDVNVE 71
Query: 407 YPYAPPVVKFMTPCFHPNVD--TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQS 580
YP+ PP +KF +HPNVD TC L +L++ W + VLL++ LL EP+
Sbjct: 72 YPFKPPYLKFCHNVYHPNVDPVTCELCSPMLLQENWKPETTMEDVLLNLIVLLNEPDLSR 131
Query: 581 PLNQQASY 604
P+N A++
Sbjct: 132 PVNIDAAH 139
>U23517-9|AAB93334.2| 314|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein6 protein.
Length = 314
Score = 57.6 bits (133), Expect = 8e-09
Identities = 38/109 (34%), Positives = 53/109 (48%), Gaps = 2/109 (1%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+RL KE MEL + ++ A P +NLF+W TI G L T + G Y + FP YP
Sbjct: 13 RRLMKEAMELRQPTEM-YHAQPMEDNLFEWHFTIRGTLGTDFEGGIYHGRIIFPADYPMK 71
Query: 419 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL 559
PP + +TP F N C L + W + +RT LL++ L
Sbjct: 72 PPNLILLTPNGRFELNKKVC-LSISGYHPETWLPSWSIRTALLALIGFL 119
>Z81108-2|CAB03238.1| 180|Caenorhabditis elegans Hypothetical
protein R09B3.4 protein.
Length = 180
Score = 57.2 bits (132), Expect = 1e-08
Identities = 31/97 (31%), Positives = 49/97 (50%), Gaps = 7/97 (7%)
Frame = +2
Query: 347 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK------W 508
P E +Y G K++ + P Y PPVVK +T +HPN++ G ICL IL+ W
Sbjct: 67 PQEGIYRGGKFRFKITVPPEYNNVPPVVKCLTKVWHPNINEDGSICLSILRQNSLDQYGW 126
Query: 509 TALYDVRTVLLSIQSLLAE-PNTQSPLNQQASYLWPE 616
++ V+ + SL + + LN QA+ +W +
Sbjct: 127 RPTRNLTDVVHGLVSLFNDLMDFNDALNIQAAQMWSQ 163
>AC024747-1|AAO21404.1| 203|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein26 protein.
Length = 203
Score = 55.6 bits (128), Expect = 3e-08
Identities = 32/109 (29%), Positives = 50/109 (45%), Gaps = 2/109 (1%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
+RL+K+ L++ + A P N+ +W I G +T Y G Y L FP +P+
Sbjct: 11 QRLKKDYQRLLKEPVPFMKAAPLETNILEWRYIIIGAPKTPYEGGIYMGKLLFPKDFPFK 70
Query: 419 PPVVKFMTP--CFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL 559
PP + +TP F N C L D D W + V T++ + S +
Sbjct: 71 PPAILMLTPNGRFQTNTRLC-LSISDYHPDTWNPAWTVSTIITGLMSFM 118
>U40411-1|AAC47063.2| 679|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein17 protein.
Length = 679
Score = 52.4 bits (120), Expect = 3e-07
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 12/86 (13%)
Frame = +2
Query: 338 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP-----CFHPNVDTCGLICLDIL-- 496
I+GP +T YA ++ + FP YP++PP F+T F+PN+ G ICL IL
Sbjct: 449 ISGPDDTPYANGLFEFDIFFPTGYPFSPPKCAFLTTGSGNVRFNPNLYNDGKICLSILGT 508
Query: 497 -----KDKWTALYDVRTVLLSIQSLL 559
++KW + VL+SIQ ++
Sbjct: 509 WEGRPEEKWNPYCSLMQVLVSIQEVI 534
>Z92834-2|CAB07383.1| 139|Caenorhabditis elegans Hypothetical
protein F39B2.2 protein.
Length = 139
Score = 42.7 bits (96), Expect = 3e-04
Identities = 30/98 (30%), Positives = 46/98 (46%), Gaps = 4/98 (4%)
Frame = +2
Query: 317 LFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVD-TCGLI---C 484
L +W +I GP T Y Y L ++ +YP PP V+F T V+ + G+I
Sbjct: 38 LTRWTASIIGPPRTPYESRIYNLQIQCGGNYPREPPTVRFTTKVHMVGVNQSNGVIDKRN 97
Query: 485 LDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
L L++ W+ Y ++TVL I+ + L Q A
Sbjct: 98 LTTLRN-WSNSYMIKTVLEDIRKNMMMAKENLKLQQPA 134
>U39674-4|AAA80414.2| 182|Caenorhabditis elegans Ubiquitin
conjugating enzyme protein22 protein.
Length = 182
Score = 35.9 bits (79), Expect = 0.029
Identities = 15/35 (42%), Positives = 22/35 (62%)
Frame = +2
Query: 338 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 442
I GP +T Y +++ L FP++YP A P +KF T
Sbjct: 35 IAGPADTPYETGVFEVDLTFPDNYPNALPQIKFQT 69
>AF040645-12|AAB94978.2| 78|Caenorhabditis elegans Hypothetical
protein F52C6.12 protein.
Length = 78
Score = 35.5 bits (78), Expect = 0.038
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSL 391
KR+QKEL +L R S ++L+ W TI GP E+ Y G + L++
Sbjct: 4 KRIQKELHDLGRDPPAQCSTGSVGDDLYHWQATIMGPPESPYQGGIFFLTI 54
>U28944-7|AAN63457.1| 295|Caenorhabditis elegans Hypothetical
protein C18A3.5f protein.
Length = 295
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 450 KQGVINLTTGGAYGYEFGNSS 388
K G T GG+YGY +GNSS
Sbjct: 198 KTGDTGKTPGGSYGYGYGNSS 218
>U28944-6|AAN63456.1| 305|Caenorhabditis elegans Hypothetical
protein C18A3.5e protein.
Length = 305
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 450 KQGVINLTTGGAYGYEFGNSS 388
K G T GG+YGY +GNSS
Sbjct: 208 KTGDTGKTPGGSYGYGYGNSS 228
>U28944-5|AAK68191.1| 408|Caenorhabditis elegans Hypothetical
protein C18A3.5a protein.
Length = 408
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 450 KQGVINLTTGGAYGYEFGNSS 388
K G T GG+YGY +GNSS
Sbjct: 311 KTGDTGKTPGGSYGYGYGNSS 331
>U28944-4|AAK68192.1| 376|Caenorhabditis elegans Hypothetical
protein C18A3.5b protein.
Length = 376
Score = 29.1 bits (62), Expect = 3.3
Identities = 12/21 (57%), Positives = 14/21 (66%)
Frame = -2
Query: 450 KQGVINLTTGGAYGYEFGNSS 388
K G T GG+YGY +GNSS
Sbjct: 279 KTGDTGKTPGGSYGYGYGNSS 299
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,391,766
Number of Sequences: 27780
Number of extensions: 323206
Number of successful extensions: 887
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 840
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 874
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1666201324
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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