Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0057
(715 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)... 188 3e-48
At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)... 187 6e-48
At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E... 123 1e-28
At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E... 123 1e-28
At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E... 123 1e-28
At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E... 121 4e-28
At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)... 120 7e-28
At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative ... 120 7e-28
At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)... 120 1e-27
At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)... 120 1e-27
At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E... 119 2e-27
At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E... 119 2e-27
At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative ... 119 2e-27
At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative ... 119 2e-27
At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative ... 118 4e-27
At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative ... 118 4e-27
At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative ... 118 4e-27
At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa ... 118 5e-27
At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa ... 118 5e-27
At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E... 114 5e-26
At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative ... 113 1e-25
At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative ... 108 3e-24
At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative ... 104 5e-23
At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family pro... 103 2e-22
At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative ... 101 5e-22
At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E... 100 1e-21
At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative ... 99 3e-21
At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10) id... 98 4e-21
At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)... 96 2e-20
At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)... 96 2e-20
At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative ... 94 7e-20
At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative ... 90 2e-18
At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E... 87 8e-18
At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E... 87 1e-17
At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E... 87 1e-17
At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E... 87 1e-17
At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative ... 85 3e-17
At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)... 83 2e-16
At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)... 83 2e-16
At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative stron... 82 4e-16
At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)... 81 5e-16
At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)... 79 4e-15
At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative ... 70 1e-12
At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative ... 61 8e-10
At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative ... 56 2e-08
At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related si... 47 1e-05
At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family pro... 44 8e-05
At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family pro... 44 1e-04
At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family pro... 41 7e-04
At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family pro... 41 7e-04
At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family pro... 40 0.001
At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family pro... 37 0.015
At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family pro... 37 0.015
At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family pro... 30 1.8
At5g57990.1 68418.m07255 ubiquitin-specific protease 23, putativ... 29 2.3
At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-... 29 2.3
At5g12900.1 68418.m01480 expressed protein 29 3.1
At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family pro... 29 3.1
At2g25850.2 68415.m03104 nucleotidyltransferase family protein c... 28 7.1
At2g25850.1 68415.m03103 nucleotidyltransferase family protein c... 28 7.1
At1g21500.1 68414.m02689 expressed protein 28 7.1
At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein si... 27 9.3
At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein si... 27 9.3
At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein si... 27 9.3
At2g06210.2 68415.m00683 phosphoprotein-related low similarity t... 27 9.3
At2g06210.1 68415.m00684 phosphoprotein-related low similarity t... 27 9.3
>At3g20060.1 68416.m02537 ubiquitin-conjugating enzyme 19 (UBC19)
nearly identical to ubiquitin-conjugating enzyme UBC19
[Arabidopsis thaliana] GI:22530865; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 181
Score = 188 bits (458), Expect = 3e-48
Identities = 88/141 (62%), Positives = 104/141 (73%)
Frame = +2
Query: 188 AKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYA 367
+KQS K D+H+V KRLQ ELM LM +D GISAFPE +N+F W GTI G +TV+
Sbjct: 22 SKQSAPPTKTVDSHSVLKRLQSELMGLMMGADPGISAFPEEDNIFCWKGTITGSKDTVFE 81
Query: 368 GHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSI 547
G +Y+LSL F N YP+ P VKF T CFHPNVD G ICLDIL+DKW++ YDVRT+LLSI
Sbjct: 82 GTEYRLSLTFSNDYPFKSPKVKFETCCFHPNVDLYGNICLDILQDKWSSAYDVRTILLSI 141
Query: 548 QSLLAEPNTQSPLNQQASYLW 610
QSLL EPN SPLN QA+ LW
Sbjct: 142 QSLLGEPNISSPLNNQAAQLW 162
>At1g50490.1 68414.m05662 ubiquitin-conjugating enzyme 20 (UBC20)
nearly identical to ubiquitin-conjugating enzyme UBC20
[Arabidopsis thaliana] GI:22530867; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 180
Score = 187 bits (456), Expect = 6e-48
Identities = 90/154 (58%), Positives = 106/154 (68%)
Frame = +2
Query: 149 QNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKW 328
Q P +SN +KQ K D+ +V KRLQ ELM LM GISAFPE +N+F W
Sbjct: 8 QGNTPADPPASNGSKQPAAPTKTVDSQSVLKRLQSELMGLMMGGGPGISAFPEEDNIFCW 67
Query: 329 IGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKW 508
GTI G +TV+ G +Y+LSL F N YP+ PP VKF T CFHPNVD G ICLDIL+DKW
Sbjct: 68 KGTITGSKDTVFEGTEYRLSLSFSNDYPFKPPKVKFETCCFHPNVDVYGNICLDILQDKW 127
Query: 509 TALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
++ YDVRT+LLSIQSLL EPN SPLN QA+ LW
Sbjct: 128 SSAYDVRTILLSIQSLLGEPNISSPLNTQAAQLW 161
>At1g14400.2 68414.m01708 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 123 bits (297), Expect = 1e-28
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KRL ++ L + GIS P+ N+ W I GP +T + G +KLSL+F YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP V+F++ FHPN+ G ICLDIL+++W+ +YDV +L SIQSLL +PN SP N +A
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 599 SYLWPE 616
+ ++ E
Sbjct: 127 ARMYSE 132
>At1g14400.1 68414.m01707 ubiquitin-conjugating enzyme 1 (UBC1) E2;
identical to gi:431259, SP:P25865
Length = 152
Score = 123 bits (297), Expect = 1e-28
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KRL ++ L + GIS P+ N+ W I GP +T + G +KLSL+F YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP V+F++ FHPN+ G ICLDIL+++W+ +YDV +L SIQSLL +PN SP N +A
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 599 SYLWPE 616
+ ++ E
Sbjct: 127 ARMYSE 132
>At2g02760.1 68415.m00219 ubiquitin-conjugating enzyme 2 (UBC2) E2;
identical to gi:2689242, SP:P42745
Length = 152
Score = 123 bits (296), Expect = 1e-28
Identities = 55/126 (43%), Positives = 79/126 (62%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KRL ++ L + GIS P+ N+ W I GP +T + G +KLSL+F YP
Sbjct: 7 KRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP V+F++ FHPN+ G ICLDIL+++W+ +YDV +L SIQSLL +PN SP N +A
Sbjct: 67 PPTVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAILTSIQSLLCDPNPNSPANSEA 126
Query: 599 SYLWPE 616
+ ++ E
Sbjct: 127 ARMFSE 132
>At5g62540.1 68418.m07849 ubiquitin-conjugating enzyme 3 (UBC3) E2;
identical to gi:431261, SP:P42746
Length = 150
Score = 121 bits (292), Expect = 4e-28
Identities = 56/126 (44%), Positives = 78/126 (61%)
Frame = +2
Query: 239 KRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
KRL + L + GIS P+ N+ W I GP +T + G +KL+L F YP
Sbjct: 7 KRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTEDYPNK 66
Query: 419 PPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQA 598
PP+V+F++ FHPN+ G ICLDIL+++W+ +YDV VL SIQSLL +PN SP N +A
Sbjct: 67 PPIVRFVSRMFHPNIYADGSICLDILQNQWSPIYDVAAVLTSIQSLLCDPNPDSPANAEA 126
Query: 599 SYLWPE 616
+ L+ E
Sbjct: 127 ARLFSE 132
>At3g08690.1 68416.m01010 ubiquitin-conjugating enzyme 11 (UBC11)
E2; identical to gi:12643427, SP:P35134
Length = 148
Score = 120 bits (290), Expect = 7e-28
Identities = 55/125 (44%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ YAG + +S+ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVFLVSIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T +HPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVSFKTKVYHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At1g16890.2 68414.m02044 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 120 bits (290), Expect = 7e-28
Identities = 58/129 (44%), Positives = 78/129 (60%)
Frame = +2
Query: 224 NHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 403
N + +R+ KE L+ GISA P EN+ + I GP ++ Y G +KL L P
Sbjct: 3 NSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 404 SYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
YP A P V+F+T +HPN+D G ICLDILKDKW+ +RTVLLSIQ+LL+ PN P
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 584 LNQQASYLW 610
L++ + W
Sbjct: 123 LSENIAKHW 131
>At5g53300.2 68418.m06625 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 120 bits (289), Expect = 1e-27
Identities = 55/125 (44%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ YAG + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At5g53300.1 68418.m06624 ubiquitin-conjugating enzyme 10 (UBC10)
E2; identical to gi:297877, SP:P35133
Length = 148
Score = 120 bits (289), Expect = 1e-27
Identities = 55/125 (44%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ YAG + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At5g41700.2 68418.m05070 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 119 bits (287), Expect = 2e-27
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ Y+G + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At5g41700.1 68418.m05069 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 148
Score = 119 bits (287), Expect = 2e-27
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ Y+G + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At1g78870.2 68414.m09194 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 153
Score = 119 bits (287), Expect = 2e-27
Identities = 57/129 (44%), Positives = 78/129 (60%)
Frame = +2
Query: 224 NHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 403
N + +R+ KE L+ GISA P +N+ + I GP ++ Y G +KL L P
Sbjct: 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 404 SYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
YP A P V+F+T +HPN+D G ICLDILKDKW+ +RTVLLSIQ+LL+ PN P
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP 122
Query: 584 LNQQASYLW 610
L++ + W
Sbjct: 123 LSENIAKHW 131
>At2g16740.1 68415.m01920 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P35133 Ubiquitin-conjugating
enzyme E2-17 kDa 10 (EC 6.3.2.19) (Ubiquitin- protein
ligase 10) (Ubiquitin carrier protein 10) {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 119 bits (286), Expect = 2e-27
Identities = 55/125 (44%), Positives = 79/125 (63%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
++R+ KEL EL R SA P E++F W TI GP E+ Y+G + +++ FP YP+
Sbjct: 3 TRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGPNESPYSGGVFLVNIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILKD+W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVVFRTKVFHPNINSNGNICLDILKDQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHIY 127
>At5g56150.2 68418.m07005 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 118 bits (284), Expect = 4e-27
Identities = 53/125 (42%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L R SA P +++F+W TI GP ++ +AG + +++ FP YP+
Sbjct: 3 SKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T +HPN+++ G ICLDILK++W+ V VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHIY 127
>At5g56150.1 68418.m07004 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin-conjugating enzyme UBC2
[Mesembryanthemum crystallinum] GI:5762457, UBC4 [Pisum
sativum] GI:456568; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 118 bits (284), Expect = 4e-27
Identities = 53/125 (42%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L R SA P +++F+W TI GP ++ +AG + +++ FP YP+
Sbjct: 3 SKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGPADSPFAGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T +HPN+++ G ICLDILK++W+ V VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVYHPNINSNGSICLDILKEQWSPALTVSKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHIY 127
>At1g64230.1 68414.m07276 ubiquitin-conjugating enzyme, putative
identical or nearly so to Ubiquitin-conjugating enzymes
SP|P35132, SP|P35131, SP|P35133 from {Arabidopsis
thaliana}; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 148
Score = 118 bits (284), Expect = 4e-27
Identities = 54/125 (43%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP ++ Y+G + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPNV++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNVNSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At4g27960.2 68417.m04012 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 178
Score = 118 bits (283), Expect = 5e-27
Identities = 53/125 (42%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP ++ Y+G + +++ FP YP+
Sbjct: 33 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 92
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 93 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 152
Query: 596 ASYLW 610
++++
Sbjct: 153 IAHMY 157
>At4g27960.1 68417.m04011 ubiquitin-conjugating enzyme E2-17 kDa 9
(UBC9) E2; identical to gi:297883, SP:P35132; identical
to cDNA UBC9 for ubiquitin conjugating enzyme homolog
GI:297883
Length = 148
Score = 118 bits (283), Expect = 5e-27
Identities = 53/125 (42%), Positives = 80/125 (64%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP ++ Y+G + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQ 595
PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL +
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVPE 122
Query: 596 ASYLW 610
++++
Sbjct: 123 IAHMY 127
>At5g41700.4 68418.m05071 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 149
Score = 114 bits (275), Expect = 5e-26
Identities = 54/126 (42%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKG-ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 412
SKR+ KEL +L + I A P +E++F W TI GP E+ Y+G + +++ FP YP
Sbjct: 3 SKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYP 62
Query: 413 YAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQ 592
+ PP V F T FHPN+++ G ICLDILK++W+ + VLLSI SLL +PN PL
Sbjct: 63 FKPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVLLSICSLLTDPNPDDPLVP 122
Query: 593 QASYLW 610
+ ++++
Sbjct: 123 EIAHMY 128
>At3g08700.1 68416.m01011 ubiquitin-conjugating enzyme, putative
strong similar to ubiquitin-conjugating enzymes E2-17
from [Arabidopsis thaliana] SP|P35134, SP|P35132,
SP|P35133; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 149
Score = 113 bits (272), Expect = 1e-25
Identities = 53/126 (42%), Positives = 80/126 (63%), Gaps = 1/126 (0%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESE-NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 412
SKR+ +EL ++ R SA P +E ++F W TI GP ++ Y+G + +S++F + YP
Sbjct: 3 SKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGPHDSPYSGGVFTVSIDFSSDYP 62
Query: 413 YAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQ 592
+ PP V F T +HPN+D+ G ICLDILK++W+ VLLSI SLL +PN PL
Sbjct: 63 FKPPKVNFKTKVYHPNIDSKGSICLDILKEQWSPAPTTSKVLLSICSLLTDPNPNDPLVP 122
Query: 593 QASYLW 610
+ ++L+
Sbjct: 123 EIAHLY 128
>At5g50870.1 68418.m06304 ubiquitin-conjugating enzyme, putative
strong similarity to ubiquitin conjugating enzyme
[Lycopersicon esculentum] GI:886679; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 192
Score = 108 bits (260), Expect = 3e-24
Identities = 50/116 (43%), Positives = 75/116 (64%), Gaps = 2/116 (1%)
Frame = +2
Query: 242 RLQKELMELMRCSDK-GISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYA 418
R+QKEL + R D GI P+S+NL + GTI GP+ T Y G +++ + P+ YP+
Sbjct: 6 RIQKELQDCERNQDSSGIRVCPKSDNLTRLTGTIPGPIGTPYEGGTFQIDITMPDGYPFE 65
Query: 419 PPVVKFMTPCFHPNVDT-CGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
PP ++F T +HPN+ + G ICLDILKD+W+ ++T L+SIQ+LL+ P + P
Sbjct: 66 PPKMQFSTKVWHPNISSQSGAICLDILKDQWSPALTLKTALVSIQALLSAPEPKDP 121
>At1g16890.1 68414.m02043 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 120
Score = 104 bits (250), Expect = 5e-23
Identities = 46/91 (50%), Positives = 60/91 (65%)
Frame = +2
Query: 338 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTAL 517
I GP ++ Y G +KL L P YP A P V+F+T +HPN+D G ICLDILKDKW+
Sbjct: 8 ILGPTQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPA 67
Query: 518 YDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
+RTVLLSIQ+LL+ PN PL++ + W
Sbjct: 68 LQIRTVLLSIQALLSAPNPDDPLSENIAKHW 98
>At1g36340.1 68414.m04516 ubiquitin-conjugating enzyme family
protein similar to Ubiquitin-conjugating enzyme E2-16
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) from {Schizosaccharomyces pombe}
SP|P46595, {Caenorhabditis elegans} SP|P35129; contains
Pfam profile PF00179: Ubiquitin-conjugating enzyme
Length = 154
Score = 103 bits (246), Expect = 2e-22
Identities = 46/101 (45%), Positives = 61/101 (60%)
Frame = +2
Query: 308 SENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICL 487
S N+++W I GP T Y G + LS++FP YP+ PP F TP +HPN++ G IC+
Sbjct: 33 SNNIYEWTAVIRGPDGTPYEGGMFNLSIKFPTDYPFKPPKFTFKTPIYHPNINDEGSICM 92
Query: 488 DILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
+ILKDKWT V VLLSI LL +PN PL + L+
Sbjct: 93 NILKDKWTPALMVEKVLLSILLLLEKPNPDDPLVPEIGQLF 133
>At5g25760.1 68418.m03057 ubiquitin-conjugating enzyme, putative
similar to SP|O60015 Ubiquitin-conjugating enzyme E2-21
kDa (EC 6.3.2.19) (Ubiquitin-protein ligase) (Ubiquitin
carrier protein) {Pichia angusta}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 157
Score = 101 bits (242), Expect = 5e-22
Identities = 51/119 (42%), Positives = 69/119 (57%), Gaps = 3/119 (2%)
Frame = +2
Query: 242 RLQKELMELMR--CSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
RL KE E+ R +D I + N+FKW I GP ET Y G ++L+ P YP
Sbjct: 7 RLFKEYKEVQREKVADPDIQLICDDTNIFKWTALIKGPSETPYEGGVFQLAFSVPEPYPL 66
Query: 416 APPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLN 589
PP V+F+T FHPNV G ICLDILK+ W+ + +++V +I +L+A P SPLN
Sbjct: 67 QPPQVRFLTKIFHPNVHFKTGEICLDILKNAWSPAWTLQSVCRAIIALMAHPEPDSPLN 125
>At5g41700.3 68418.m05068 ubiquitin-conjugating enzyme 8 (UBC8) E2;
identical to gi:297882, SP:P35131
Length = 145
Score = 100 bits (239), Expect = 1e-21
Identities = 45/105 (42%), Positives = 65/105 (61%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR+ KEL +L + SA P +E++F W TI GP E+ Y+G + +++ FP YP+
Sbjct: 3 SKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVFLVTIHFPPDYPF 62
Query: 416 APPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQ 550
PP V F T FHPN+++ G ICLDILK++W+ + V L Q
Sbjct: 63 KPPKVAFRTKVFHPNINSNGSICLDILKEQWSPALTISKVTLIFQ 107
>At1g78870.1 68414.m09193 ubiquitin-conjugating enzyme, putative
nearly identical to ubiquitin-conjugating enzyme E2
[Catharanthus roseus] GI:5381319; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 112
Score = 98.7 bits (235), Expect = 3e-21
Identities = 48/110 (43%), Positives = 64/110 (58%)
Frame = +2
Query: 224 NHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPN 403
N + +R+ KE L+ GISA P +N+ + I GP ++ Y G +KL L P
Sbjct: 3 NSNLPRRIIKETQRLLSEPAPGISASPSEDNMRYFNVMILGPTQSPYEGGVFKLELFLPE 62
Query: 404 SYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQS 553
YP A P V+F+T +HPN+D G ICLDILKDKW+ +RTVLL S
Sbjct: 63 EYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQIRTVLLRYMS 112
>At3g13550.1 68416.m01703 ubiquitin-conjugating enzyme (COP10)
identical to ubiquitin-conjugating enzyme COP10
[Arabidopsis thaliana] GI:20065779; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 182
Score = 98.3 bits (234), Expect = 4e-21
Identities = 47/118 (39%), Positives = 69/118 (58%)
Frame = +2
Query: 230 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSY 409
A KR+Q+E+ EL SA P+ +NL+ WI TI GP T Y G + L + FP+ Y
Sbjct: 36 ASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGPSGTPYEGGIFFLDIIFPSDY 95
Query: 410 PYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSP 583
P+ PP + F T +H NVDT G + ++IL+D W+ + VL +I+S+ +P SP
Sbjct: 96 PFKPPKLVFKTRIYHCNVDTAGDLSVNILRDSWSPALTITKVLQAIRSIFLKPEPYSP 153
>At3g55380.1 68416.m06151 ubiquitin-conjugating enzyme 14 (UBC14)
E2; UbcAT3; identical to gi:2129757, S46656
Length = 167
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/143 (34%), Positives = 82/143 (57%), Gaps = 14/143 (9%)
Frame = +2
Query: 224 NHAVSKRLQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFP 400
N+ S LQK+L +L + G SA + +N+F+W +I GP +T+Y G + + FP
Sbjct: 3 NNQASLLLQKQLKDLCKKPVDGFSAGLVDEKNVFQWSVSIMGPPDTLYEGGFFNAIMSFP 62
Query: 401 NSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLL 541
+YP +PP V F + +HPNV + G +C+ IL ++WT ++ V +++L
Sbjct: 63 ENYPVSPPTVTFTSEMWHPNVYSDGKVCISILHPPGDDPHGYELASERWTPVHTVESIVL 122
Query: 542 SIQSLLAEPNTQSPLNQQASYLW 610
SI S+L+ PN +SP N +A+ W
Sbjct: 123 SIISMLSGPNDESPANVEAAKEW 145
>At3g46460.1 68416.m05037 ubiquitin-conjugating enzyme 13 (UBC13)
E2; identical to gi:992706
Length = 166
Score = 95.9 bits (228), Expect = 2e-20
Identities = 50/138 (36%), Positives = 80/138 (57%), Gaps = 14/138 (10%)
Frame = +2
Query: 245 LQKELMELMRCSDKGISA-FPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 421
LQK+L +L + G SA + +N+F+W TI GP +T+Y G + + FP +YP +P
Sbjct: 9 LQKQLKDLCKHPVDGFSAGLVDEKNIFEWSVTIIGPPDTLYEGGFFYAIMSFPQNYPNSP 68
Query: 422 PVVKFMTPCFHPNVDTCGLICLDIL-------------KDKWTALYDVRTVLLSIQSLLA 562
P V+F + +HPNV G +C+ IL ++WT ++ V +++LSI S+L+
Sbjct: 69 PTVRFTSDIWHPNVYPDGRVCISILHPPGDDPSGYELASERWTPVHTVESIMLSIISMLS 128
Query: 563 EPNTQSPLNQQASYLWPE 616
PN +SP N +A+ W E
Sbjct: 129 GPNDESPANVEAAKEWRE 146
>At2g32790.1 68415.m04014 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme from [Oryza
sativa] GI:1373001, {Arabidopsis thaliana} SP|P35134,
SP|P35131; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 177
Score = 94.3 bits (224), Expect = 7e-20
Identities = 49/148 (33%), Positives = 79/148 (53%)
Frame = +2
Query: 167 YASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTING 346
+ +S N K S DT+ + + K Q E ++++ + S P EN+F+W T+NG
Sbjct: 12 FFTSRNSGKVSPDTVSKSAENRLWKEFQ-EKDDVLKIHVR--SWLPSPENIFRWEATVNG 68
Query: 347 PLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDV 526
P+ Y + +S+ P YPY PP + F T FHPN+ G I +DIL +W++ +
Sbjct: 69 PVGCPYEKGVFTVSVHIPPKYPYEPPKITFKTKIFHPNISEIGEIFVDILGSRWSSALTI 128
Query: 527 RTVLLSIQSLLAEPNTQSPLNQQASYLW 610
VLLSI S+L+ P ++ A+ L+
Sbjct: 129 NLVLLSICSILSNPVEPLLVSNHAARLY 156
>At3g24515.1 68416.m03077 ubiquitin-conjugating enzyme, putative
similar to Ubiquitin-conjugating enzyme E2
(Ubiquitin-protein ligase) (Ubiquitin carrier protein)
from {Xenopus laevis} SP|P51669, {Schizosaccharomyces
pombe} SP|P46595, {Caenorhabditis elegans} SP|P35129;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 409
Score = 89.8 bits (213), Expect = 2e-18
Identities = 54/137 (39%), Positives = 73/137 (53%), Gaps = 14/137 (10%)
Frame = +2
Query: 233 VSKRLQKELMELMRCSDKGISAFPESENL------FKWIGTIN----GPLETVYAGHKYK 382
+S R+QKEL L+ G S FP + F TI+ GP +TVYA +
Sbjct: 7 LSLRMQKELKLLLSDPPHGAS-FPHLSSAANGSGDFSTFSTIDAQIEGPEDTVYANGIFN 65
Query: 383 LSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDIL----KDKWTALYDVRTVLLSIQ 550
L ++ P YP+ PP+V F TP +HPN+D G ICLDIL K W ++ TVL S++
Sbjct: 66 LKIQIPERYPFQPPIVSFATPIYHPNIDNSGRICLDILNLPPKGAWQPSLNISTVLTSMR 125
Query: 551 SLLAEPNTQSPLNQQAS 601
LL+EPN L + S
Sbjct: 126 LLLSEPNPDDGLMCEVS 142
>At5g41340.1 68418.m05024 ubiquitin-conjugating enzyme 4 (UBC4) E2;
identical to gi:431265, SP:P42748
Length = 187
Score = 87.4 bits (207), Expect = 8e-18
Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR + ++M+LM SD + ++ + ++ NGP +++Y G +K+ +E P++YPY
Sbjct: 5 SKRREMDMMKLMM-SDYKVETI--NDGMQEFYVEFNGPKDSLYQGGVWKIRVELPDAYPY 61
Query: 416 APPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVLLS-IQSLLAEPNTQSPLN 589
P V F+T +HPNVD G +CLD++ W+ ++D+ V + + LL PN PLN
Sbjct: 62 KSPSVGFITKIYHPNVDELSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLN 121
Query: 590 QQASYL 607
+A+ L
Sbjct: 122 GEAAAL 127
>At5g59300.1 68418.m07430 ubiquitin-conjugating enzyme 7 (UBC7) E2;
identical to gi:992703, SP:P42747
Length = 198
Score = 87.0 bits (206), Expect = 1e-17
Identities = 41/112 (36%), Positives = 67/112 (59%), Gaps = 13/112 (11%)
Frame = +2
Query: 314 NLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDI 493
N+F+W TI GP +T+Y G + + FP +YP +PP V+F + +HPNV + G +C+ I
Sbjct: 65 NIFEWSVTIIGPPDTLYEGGFFNAIMTFPQNYPNSPPTVRFTSDMWHPNVYSDGRVCISI 124
Query: 494 L-------------KDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQQASYLW 610
L ++WT ++ V +++LSI S+L+ PN +SP N +A+ W
Sbjct: 125 LHPPGDDPSGYELASERWTPVHTVESIMLSIISMLSGPNDESPANVEAAKEW 176
>At2g46030.1 68415.m05726 ubiquitin-conjugating enzyme 6 (UBC6) E2;
identical to gi|431267, SP:P42750, PIR:S52661; contains
a ubiquitin-conjugating enzymes active site (PDOC00163)
Length = 183
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/126 (34%), Positives = 72/126 (57%), Gaps = 2/126 (1%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR + ++M+LM SD + + +F T +GP +++Y G +K+ +E P +YPY
Sbjct: 5 SKRREMDMMKLMM-SDYKVDTVNDDLQMF--YVTFHGPTDSLYQGGVWKIKVELPEAYPY 61
Query: 416 APPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVLLS-IQSLLAEPNTQSPLN 589
P V F+ +HPNVD + G +CLD++ W+ ++D+ V S + LL PN P N
Sbjct: 62 KSPSVGFVNKIYHPNVDESSGAVCLDVINQTWSPMFDLINVFESFLPQLLLYPNPSDPFN 121
Query: 590 QQASYL 607
+A+ L
Sbjct: 122 GEAASL 127
>At1g63800.1 68414.m07220 ubiquitin-conjugating enzyme 5 (UBC5) E2;
identical to gi:431269, SP:P42749
Length = 185
Score = 87.0 bits (206), Expect = 1e-17
Identities = 44/126 (34%), Positives = 75/126 (59%), Gaps = 2/126 (1%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
SKR + +LM+LM SD + ++ + ++ +GP +++Y G +K+ +E P++YPY
Sbjct: 5 SKRREMDLMKLMM-SDYKVEMI--NDGMQEFFVEFSGPKDSIYEGGVWKIRVELPDAYPY 61
Query: 416 APPVVKFMTPCFHPNVD-TCGLICLDILKDKWTALYDVRTVLLS-IQSLLAEPNTQSPLN 589
P V F+T +HPNVD G +CLD++ W+ ++D+ V + + LL PN PLN
Sbjct: 62 KSPSVGFITKIYHPNVDEMSGSVCLDVINQTWSPMFDLVNVFETFLPQLLLYPNPSDPLN 121
Query: 590 QQASYL 607
+A+ L
Sbjct: 122 GEAAAL 127
>At5g05080.1 68418.m00539 ubiquitin-conjugating enzyme, putative
similar to SP|Q16763 Ubiquitin-conjugating enzyme E2-24
kDa (EC 6.3.2.19) (Ubiquitin- protein ligase) (Ubiquitin
carrier protein) {Homo sapiens}; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 251
Score = 85.4 bits (202), Expect = 3e-17
Identities = 45/122 (36%), Positives = 64/122 (52%)
Frame = +2
Query: 233 VSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYP 412
V K+L KEL L GI E+ + I GP+ T Y +++ L + +P
Sbjct: 11 VIKQLAKELKSLDESPPDGIKVVVNDEDFSQICADIEGPVGTPYENGLFRMKLALSHDFP 70
Query: 413 YAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQ 592
++PP FMT FHPNV + G IC++ LK W +R VL ++ LL EP +S LN+
Sbjct: 71 HSPPKGYFMTKIFHPNVASNGEICVNTLKKDWNPSLGLRHVLSVVRCLLIEPFPESALNE 130
Query: 593 QA 598
QA
Sbjct: 131 QA 132
>At5g42990.1 68418.m05243 ubiquitin-conjugating enzyme 18 (UBC18)
E2; identical to gi:2801448
Length = 161
Score = 82.6 bits (195), Expect = 2e-16
Identities = 52/139 (37%), Positives = 72/139 (51%), Gaps = 2/139 (1%)
Frame = +2
Query: 173 SSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPL 352
SSS+P++++ I RLQKEL E G ++NL KW+ + G
Sbjct: 3 SSSSPSRKALSKI-------ACNRLQKELSEWQVNPPTGFK-HRVTDNLQKWVIEVTGAP 54
Query: 353 ETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPC-FHPNVDTCGLICLDILKDKWTALYDVR 529
T+YA Y L +EFP YP P V F+ P HP++ + G ICLDIL D W+ V
Sbjct: 55 GTLYANETYNLQVEFPQHYPMEAPQVIFVPPAPLHPHIYSNGHICLDILYDSWSPAMTVS 114
Query: 530 TVLLSIQSLL-AEPNTQSP 583
+V +SI S+L + P Q P
Sbjct: 115 SVCISILSMLSSSPEKQRP 133
>At4g36410.1 68417.m05173 ubiquitin-conjugating enzyme 17 (UBC17)
E2; identical to gi:2801446
Length = 161
Score = 82.6 bits (195), Expect = 2e-16
Identities = 45/125 (36%), Positives = 65/125 (52%), Gaps = 1/125 (0%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
+ RLQKE ME G S+NL +WI ++G T+YA Y+L +EFP YP
Sbjct: 17 TNRLQKEFMEWQTNPPSGFK-HRVSDNLQRWIIEVHGVPGTLYANETYQLQVEFPEHYPM 75
Query: 416 APPVVKFMTPC-FHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPNTQSPLNQ 592
P V F P HP++ + G ICLD+L D W+ + ++ LSI S+L+ + +
Sbjct: 76 EAPQVIFQHPAPLHPHIYSNGHICLDVLYDSWSPAMRLSSICLSILSMLSSSSVKQKPKD 135
Query: 593 QASYL 607
YL
Sbjct: 136 NDHYL 140
>At2g18600.1 68415.m02166 RUB1-conjugating enzyme, putative strong
similarity to gi:6635457 RUB1 conjugating enzyme
[Arabidopsis thaliana]; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 185
Score = 81.8 bits (193), Expect = 4e-16
Identities = 46/130 (35%), Positives = 68/130 (52%), Gaps = 1/130 (0%)
Frame = +2
Query: 215 LKDNHAVSKRLQKELMELMRCSDKGISAFPESEN-LFKWIGTINGPLETVYAGHKYKLSL 391
+K A RL K++ EL IS FP +N L + TI P E Y + S
Sbjct: 26 VKKQSAGELRLHKDISELNLPKSCKIS-FPNGKNDLMNFEVTIK-PDEGYYLSGNFVFSF 83
Query: 392 EFPNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLAEPN 571
+ N YP+ P VK T +HPN+D G +CL+IL++ W + ++ TV+ + L EPN
Sbjct: 84 QVSNMYPHEAPKVKCKTKVYHPNIDLEGNVCLNILREDWKPVLNINTVIYGLFHLFTEPN 143
Query: 572 TQSPLNQQAS 601
+ PLN +A+
Sbjct: 144 YEDPLNHEAA 153
>At1g45050.1 68414.m05165 ubiquitin-conjugating enzyme 15 (UBC15)
E2; identical to ubiquitin-conjugating enzyme 15
GI:2801442 from [Arabidopsis thaliana]
Length = 161
Score = 81.4 bits (192), Expect = 5e-16
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 2/116 (1%)
Frame = +2
Query: 242 RLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAP 421
RLQKEL E G ++NL KW + G T+YA Y+L +EFP YP
Sbjct: 19 RLQKELSEWQLNPPTGFR-HKVTDNLQKWTIDVTGAPGTLYANETYQLQVEFPEHYPMEA 77
Query: 422 PVVKFMTPC-FHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLL-AEPNTQSP 583
P V F++P HP++ + G ICLDIL D W+ V +V +SI S+L + P Q P
Sbjct: 78 PQVVFVSPAPSHPHIYSNGHICLDILYDSWSPAMTVNSVCISILSMLSSSPAKQRP 133
>At1g75440.1 68414.m08763 ubiquitin-conjugating enzyme 16 (UBC16)
E2; identical to gi:2801444, GB:AAC39325 from
[Arabidopsis thaliana] (Plant Mol. Biol. 23 (2), 387-396
(1993))
Length = 161
Score = 78.6 bits (185), Expect = 4e-15
Identities = 42/110 (38%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Frame = +2
Query: 236 SKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPY 415
+ RLQKEL+E G ++NL +WI + G T+YA Y+L ++FP YP
Sbjct: 17 TNRLQKELVEWQMNPPTGFK-HKVTDNLQRWIIEVIGAPGTLYANDTYQLQVDFPEHYPM 75
Query: 416 APPVVKFMTPC-FHPNVDTCGLICLDILKDKWTALYDVRTVLLSIQSLLA 562
P V F+ P HP++ + G ICLDIL D W+ V ++ +SI S+L+
Sbjct: 76 ESPQVIFLHPAPLHPHIYSNGHICLDILYDSWSPAMTVSSICISILSMLS 125
>At3g57870.1 68416.m06451 ubiquitin-conjugating enzyme, putative
strong similarity to SP|P50550 Ubiquitin-like protein
SUMO-1 conjugating enzyme (EC 6.3.2.19) (SUMO- 1-protein
ligase) (Ubiquitin carrier protein)
(Ubiquitin-conjugating enzyme UbcE2A) {Xenopus laevis};
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 160
Score = 70.1 bits (164), Expect = 1e-12
Identities = 44/130 (33%), Positives = 58/130 (44%), Gaps = 7/130 (5%)
Frame = +2
Query: 242 RLQKELMELMRCSDKGISAFPESE-----NLFKWIGTINGPLETVYAGHKYKLSLEFPNS 406
RL +E + G A PE+ NL W TI G T + G + L++ F
Sbjct: 9 RLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFPLTMHFSED 68
Query: 407 YPYAPPVVKFMTPCFHPNVDTCGLICLDILKDK--WTALYDVRTVLLSIQSLLAEPNTQS 580
YP PP KF FHPNV G +CL IL + W V+ +L+ IQ LL PN
Sbjct: 69 YPSKPPKCKFPQGFFHPNVYPSGTVCLSILNEDYGWRPAITVKQILVGIQDLLDTPNPAD 128
Query: 581 PLNQQASYLW 610
P +L+
Sbjct: 129 PAQTDGYHLF 138
>At3g17000.1 68416.m02171 ubiquitin-conjugating enzyme, putative
similar to Non-Canonical UBiquitin Conjugating Enzyme 1
(NCUBE1) from [Gallus gallus] GI:7362937, [Mus musculus]
GI:7363050, [Homo sapiens] GI:7362973; contains Pfam
profile PF00179: Ubiquitin-conjugating enzyme
Length = 309
Score = 60.9 bits (141), Expect = 8e-10
Identities = 37/122 (30%), Positives = 60/122 (49%), Gaps = 4/122 (3%)
Frame = +2
Query: 218 KDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEF 397
+ N AV KR+ +E+ E+ + P EN+F+W I GP +T + G Y ++
Sbjct: 8 RKNPAV-KRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIYHGRIQL 66
Query: 398 PNSYPYAPPVVKFMTPCFHPNVDTCGLICLDILK---DKWTALYDVRTVLLSIQSLL-AE 565
P YP+ PP +TP + +T ICL I + W + VRT L+++ + +
Sbjct: 67 PADYPFKPPSFMLLTP--NGRFETNTKICLSISNYHPEHWQPSWSVRTALVALIAFMPTS 124
Query: 566 PN 571
PN
Sbjct: 125 PN 126
>At5g50430.1 68418.m06245 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 243
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 230 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSY 409
A KRLQKE L + + A P ++ +W + G T +AG Y ++FP Y
Sbjct: 5 ACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 410 PYAPPVVKFMTPCFHPNVDTCGLICL---DILKDKWTALYDVRTVLLSIQSLLAE--PNT 574
PY PP + TP + T ICL D + W ++ V ++L + S + + P T
Sbjct: 65 PYKPPGITMTTP--NGRFVTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDNSPTT 122
Query: 575 QS 580
S
Sbjct: 123 GS 124
>At1g17280.1 68414.m02105 ubiquitin-conjugating enzyme, putative
similar to ubiquitin conjugating enzyme 6 from [Homo
sapiens] GI:14029267, [Mus musculus] GI:14029263;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 237
Score = 56.0 bits (129), Expect = 2e-08
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 5/122 (4%)
Frame = +2
Query: 230 AVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSY 409
A KRLQKE L + + A P ++ +W + G T +AG Y ++FP Y
Sbjct: 5 ACIKRLQKEYRALCKEPVSHVVARPSPNDILEWHYVLEGSEGTPFAGGFYYGKIKFPPEY 64
Query: 410 PYAPPVVKFMTPCFHPNVDTCGLICL---DILKDKWTALYDVRTVLLSIQSLLAE--PNT 574
PY PP + TP + T ICL D + W ++ V ++L + S + + P T
Sbjct: 65 PYKPPGITMTTP--NGRFMTQKKICLSMSDFHPESWNPMWSVSSILTGLLSFMMDTSPTT 122
Query: 575 QS 580
S
Sbjct: 123 GS 124
>At3g15355.1 68416.m01945 ubiquitin-conjugating enzyme-related
similar to ubiquitin-conjugating enzyme (GI:3319990)
[Mus musculus]; similar to Baculoviral IAP
repeat-containing protein 6 (Ubiquitin-conjugating
BIR-domain enzyme apollon) (Swiss-Prot:Q9NR09) [Homo
sapiens];
Length = 609
Score = 46.8 bits (106), Expect = 1e-05
Identities = 42/144 (29%), Positives = 72/144 (50%), Gaps = 12/144 (8%)
Frame = +2
Query: 164 HYASSSNPAKQ-SEDTIK-LKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGT 337
HYAS +KQ S+D K ++D + L+K+L E++ + A+ +L + +
Sbjct: 318 HYASKGTTSKQHSKDWAKRIQDEWRI---LEKDLPEMIF-----VRAYESRMDLLRAV-- 367
Query: 338 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP--CFHPNVDTCGLICLDIL----- 496
I G T Y + + FP++YP PP+V + + +PN+ CG +CL +L
Sbjct: 368 IIGAQGTPYHDGLFFFDIFFPDTYPSTPPIVHYHSGGLRINPNLYNCGKVCLSLLGTWSG 427
Query: 497 --KDKWTA-LYDVRTVLLSIQSLL 559
++KW + VL+SIQ L+
Sbjct: 428 NQREKWIPNTSTMLQVLVSIQGLI 451
>At1g53020.1 68414.m06002 ubiquitin-conjugating enzyme family
protein similar to ubiquitin-conjugating enzyme
GB:3319990 from [Mus musculus]; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1163
Score = 44.4 bits (100), Expect = 8e-05
Identities = 34/119 (28%), Positives = 53/119 (44%), Gaps = 3/119 (2%)
Frame = +2
Query: 164 HYASSSNPAKQSEDTIKLKDNHAV-SKRLQKELMELMRCSDKGISAFPESENLFKWIGTI 340
HYA+ +PAK S +K K K +QKE L + + I + I
Sbjct: 582 HYAAEGSPAKLSLWHLKFKGRPKNWVKDIQKEWKILDKNLPETIFVRACESRIDLLRAVI 641
Query: 341 NGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP--CFHPNVDTCGLICLDILKDKWT 511
G T Y + ++FP++YP PP V + + +PN+ CG +CL ++ WT
Sbjct: 642 IGAEGTPYHDGLFFFDIQFPDTYPSVPPKVHYHSGGLRINPNLYKCGKVCLSLI-STWT 699
Score = 41.1 bits (92), Expect = 7e-04
Identities = 39/142 (27%), Positives = 66/142 (46%), Gaps = 10/142 (7%)
Frame = +2
Query: 164 HYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPESENLFKWIGTIN 343
HYAS +KQ +K A K L+ +L E + + A +L + + I
Sbjct: 257 HYASKGKSSKQHSKNW-VKKVQADWKILENDLPEAI-----SVRACESRMDLLRAV--II 308
Query: 344 GPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP--CFHPNVDTCGLICLDIL------- 496
G T Y + ++FP++YP PP V + + +PN+ CG +CL +L
Sbjct: 309 GAEGTPYHDGLFFFDIQFPDTYPSVPPNVHYHSGGLRINPNLYNCGKVCLSLLGTWAGSA 368
Query: 497 KDKWTALYD-VRTVLLSIQSLL 559
++KW + +L+SIQ+L+
Sbjct: 369 REKWLPNESTMLQLLVSIQALI 390
Score = 29.9 bits (64), Expect = 1.8
Identities = 16/54 (29%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Frame = +2
Query: 338 INGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTP--CFHPNVDTCGLICLDI 493
I G T Y + ++FP++YP PP V + + +PN+ CG + + I
Sbjct: 953 IIGAEGTPYHDGLFFFDIQFPDTYPSVPPNVYYHSGGLRINPNLYNCGKVLVSI 1006
>At1g23260.1 68414.m02910 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 158
Score = 43.6 bits (98), Expect = 1e-04
Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)
Frame = +2
Query: 326 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT----PCFHPNVDTCGLICLDI 493
W GTI GP T Y G ++L L YP +PP V+F T C +P +
Sbjct: 47 WTGTILGPPNTAYEGKIFQLKLFCGKEYPESPPTVRFQTRINMACVNPETGVVEPSLFPM 106
Query: 494 LKDKWTALYDVRTVLLSIQ 550
L + W Y + +L+ ++
Sbjct: 107 LTN-WRREYTMEDILVKLK 124
>At3g52560.1 68416.m05784 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 326 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKF 436
W GTI GP TV+ G Y+L L YP PP V+F
Sbjct: 49 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRF 85
>At2g36060.1 68415.m04427 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 145
Score = 41.1 bits (92), Expect = 7e-04
Identities = 18/37 (48%), Positives = 21/37 (56%)
Frame = +2
Query: 326 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKF 436
W GTI GP TV+ G Y+L L YP PP V+F
Sbjct: 48 WTGTIIGPHNTVHEGRIYQLKLFCDKDYPEKPPTVRF 84
>At1g70660.1 68414.m08146 ubiquitin-conjugating enzyme family
protein similar to TRAF6-regulated IKK activator 1 beta
Uev1A [Homo sapiens] GI:10880969; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 159
Score = 40.3 bits (90), Expect = 0.001
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +2
Query: 326 WIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMT 442
W GTI GP T Y G ++L L YP +PP V+F +
Sbjct: 47 WTGTILGPHNTAYEGKIFQLKLFCGKDYPESPPTVRFQS 85
>At3g52560.2 68416.m05785 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 147
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 WIGTINGPLE-TVYAGHKYKLSLEFPNSYPYAPPVVKF 436
W GTI GP TV+ G Y+L L YP PP V+F
Sbjct: 49 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 86
>At2g36060.2 68415.m04428 ubiquitin-conjugating enzyme family
protein similar to DNA-binding protein CROC-1B [Homo
sapiens] GI:1066082; contains Pfam profile PF00179:
Ubiquitin-conjugating enzyme
Length = 146
Score = 36.7 bits (81), Expect = 0.015
Identities = 18/38 (47%), Positives = 21/38 (55%), Gaps = 1/38 (2%)
Frame = +2
Query: 326 WIGTINGPLE-TVYAGHKYKLSLEFPNSYPYAPPVVKF 436
W GTI GP TV+ G Y+L L YP PP V+F
Sbjct: 48 WTGTIIGPHNVTVHEGRIYQLKLFCDKDYPEKPPTVRF 85
>At2g33770.1 68415.m04141 ubiquitin-conjugating enzyme family
protein low similarity to ubiquitin-conjugating
BIR-domain enzyme APOLLON [Homo sapiens] GI:8489831,
ubiquitin-conjugating enzyme [Mus musculus] GI:3319990;
contains Pfam profile PF00179: Ubiquitin-conjugating
enzyme
Length = 907
Score = 29.9 bits (64), Expect = 1.8
Identities = 24/93 (25%), Positives = 41/93 (44%), Gaps = 10/93 (10%)
Frame = +2
Query: 356 TVYAGHKYKLSLEFPNSYPYAPPVVKFMT--PCFHPNVDTCGLICLDILK-------DKW 508
T Y + + P YP+ PP+V + + +PN+ G +CL +L + W
Sbjct: 704 TPYHDGLFFFDIMLPPQYPHEPPMVHYHSGGMRLNPNLYESGRVCLSLLNTWSGSGTEVW 763
Query: 509 TA-LYDVRTVLLSIQSLLAEPNTQSPLNQQASY 604
A + +LLS Q+L+ + P +A Y
Sbjct: 764 NAGSSSILQLLLSFQALVL---NEKPYFNEAGY 793
>At5g57990.1 68418.m07255 ubiquitin-specific protease 23, putative
(UBP23) identical to GI:11993486
Length = 859
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/60 (28%), Positives = 26/60 (43%)
Frame = -2
Query: 438 INLTTGGAYGYEFGNSSDNLYLWPAYTVSKGPLMVPIHLKRFSLSGNADIPLSLHRISSI 259
+ L GA Y+ + TVSK P ++ +HLKRF + I + S+I
Sbjct: 277 VELLDNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAI 336
>At3g61890.1 68416.m06951 homeobox-leucine zipper protein 12 (HB-12)
/ HD-ZIP transcription factor 12 identical to
homeobox-leucine zipper protein ATHB-12 (GI:6899887)
[Arabidopsis thaliana]
Length = 235
Score = 29.5 bits (63), Expect = 2.3
Identities = 17/51 (33%), Positives = 25/51 (49%)
Frame = -2
Query: 627 RQLGSGHRYDACWFKGLCVFGSAKRLWIDNNTVRTSYKAVHLSFKISKHIK 475
R+LG R A WF+ K+L + NT+R +Y + F+I K K
Sbjct: 62 RELGLQPRQVAIWFQNKRARWKTKQLEKEYNTLRANYNNLASQFEIMKKEK 112
>At5g12900.1 68418.m01480 expressed protein
Length = 562
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/63 (30%), Positives = 31/63 (49%)
Frame = +2
Query: 128 FP*NIMAQNINPHYASSSNPAKQSEDTIKLKDNHAVSKRLQKELMELMRCSDKGISAFPE 307
FP Q N + S S K E + LKD+ + ++L++ELME R D ++ E
Sbjct: 212 FPKLKKKQKSNSIFNSPSITEKSEEVSEVLKDSGSGVEKLKRELMEANRSRDAALTQVSE 271
Query: 308 SEN 316
++
Sbjct: 272 MKS 274
>At2g16920.1 68415.m01949 ubiquitin-conjugating enzyme family protein
low similarity to ubiquitin-conjugating BIR-domain enzyme
APOLLON [Homo sapiens] GI:8489831, ubiquitin-conjugating
enzyme [Mus musculus] GI:3319990; contains Pfam profile
PF00179: Ubiquitin-conjugating enzyme
Length = 1102
Score = 29.1 bits (62), Expect = 3.1
Identities = 19/76 (25%), Positives = 35/76 (46%), Gaps = 2/76 (2%)
Frame = +2
Query: 290 ISAFPESENLFKWIGTINGPLETVYAGHKYKLSLEFPNSYPYAPPVVKFMTPCF--HPNV 463
+ A+ + +L + + I G T Y + P+ YP PP + + + +PN+
Sbjct: 872 VRAYEDRMDLLRAV--IVGAFGTPYQDGLFFFDFHLPSDYPSVPPSAYYHSGGWRLNPNL 929
Query: 464 DTCGLICLDILKDKWT 511
G +CL +L + WT
Sbjct: 930 YEEGKVCLSLL-NTWT 944
>At2g25850.2 68415.m03104 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 800
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 567 GSAKRLWIDNNTVRTSYKAVHLSFKISKHIKPHVSTFG*KQGVINLTTGGAYGYEFGNSS 388
GS + L +D+ + SY L+ ++KH++P +S +G N G G E N +
Sbjct: 628 GSEQILEVDSRALVQSYH--DLAEPVAKHVRPDLSALLACEGGQNKEIGHDMGSESINDT 685
Query: 387 DNLYL 373
D +L
Sbjct: 686 DTQHL 690
>At2g25850.1 68415.m03103 nucleotidyltransferase family protein
contains Pfam profiles: PF01909 nucleotidyltransferase
domain, PF04926 poly(A) polymerase predicted RNA
binding domain; identical to cDNA GI:31747890
Length = 787
Score = 27.9 bits (59), Expect = 7.1
Identities = 19/65 (29%), Positives = 32/65 (49%)
Frame = -2
Query: 567 GSAKRLWIDNNTVRTSYKAVHLSFKISKHIKPHVSTFG*KQGVINLTTGGAYGYEFGNSS 388
GS + L +D+ + SY L+ ++KH++P +S +G N G G E N +
Sbjct: 628 GSEQILEVDSRALVQSYH--DLAEPVAKHVRPDLSALLACEGGQNKEIGHDMGSESINDT 685
Query: 387 DNLYL 373
D +L
Sbjct: 686 DTQHL 690
>At1g21500.1 68414.m02689 expressed protein
Length = 126
Score = 27.9 bits (59), Expect = 7.1
Identities = 13/27 (48%), Positives = 15/27 (55%)
Frame = +2
Query: 365 AGHKYKLSLEFPNSYPYAPPVVKFMTP 445
A H +LS P S P APPVV + P
Sbjct: 12 AAHAARLSSPSPRSLPQAPPVVLAVPP 38
>At3g13560.3 68416.m01706 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 296 LIFLYHCTALAPLALSGV-VCSQHDCLL 216
+IF YH LAPLAL+ + + QHD LL
Sbjct: 478 IIFSYHLPILAPLALTLLQLLLQHDRLL 505
>At3g13560.2 68416.m01705 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 296 LIFLYHCTALAPLALSGV-VCSQHDCLL 216
+IF YH LAPLAL+ + + QHD LL
Sbjct: 478 IIFSYHLPILAPLALTLLQLLLQHDRLL 505
>At3g13560.1 68416.m01704 glycosyl hydrolase family 17 protein
similar to beta-1,3-glucanase GI:15150341 from [Camellia
sinensis]
Length = 505
Score = 27.5 bits (58), Expect = 9.3
Identities = 15/28 (53%), Positives = 19/28 (67%), Gaps = 1/28 (3%)
Frame = -3
Query: 296 LIFLYHCTALAPLALSGV-VCSQHDCLL 216
+IF YH LAPLAL+ + + QHD LL
Sbjct: 478 IIFSYHLPILAPLALTLLQLLLQHDRLL 505
>At2g06210.2 68415.m00683 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 852
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 636 IFYRQLGSGHRYDACWFKGLCVFGSAKRLWIDNNTVRTSYKAVHLSFKISKHIKPHV 466
IF+R + SGH D W K +F A+ L + T ++ + FK +I ++
Sbjct: 267 IFHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYL 323
>At2g06210.1 68415.m00684 phosphoprotein-related low similarity to
phosphoprotein from Mus musculus GI:1236239; contains
Pfam profile PF00515 TPR Domain
Length = 1064
Score = 27.5 bits (58), Expect = 9.3
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -2
Query: 636 IFYRQLGSGHRYDACWFKGLCVFGSAKRLWIDNNTVRTSYKAVHLSFKISKHIKPHV 466
IF+R + SGH D W K +F A+ L + T ++ + FK +I ++
Sbjct: 479 IFHRLIESGHSVDVPWNKVTTLFNLARLLEQIHKTEAATFMYRLILFKYPGYIDAYL 535
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,425,596
Number of Sequences: 28952
Number of extensions: 299532
Number of successful extensions: 920
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 882
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 904
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1545769616
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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