Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0056
(614 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4XJT6 Cluster: Putative uncharacterized protein; n=1; ... 29 0.11
UniRef50_Q170V7 Cluster: Putative uncharacterized protein; n=1; ... 38 0.25
UniRef50_UPI0000DBF0DB Cluster: UPI0000DBF0DB related cluster; n... 29 0.45
UniRef50_Q4TA27 Cluster: Chromosome undetermined SCAF7470, whole... 27 1.3
UniRef50_Q8C7P2 Cluster: 12 days embryo spinal cord cDNA, RIKEN ... 27 1.5
UniRef50_Q9D443 Cluster: Adult male testis cDNA, RIKEN full-leng... 27 2.0
UniRef50_Q4TBG6 Cluster: Chromosome undetermined SCAF7129, whole... 27 2.6
UniRef50_Q3MJF2 Cluster: Il17rd protein; n=3; Mus musculus|Rep: ... 29 3.1
UniRef50_UPI0000DB7C9F Cluster: PREDICTED: similar to ubiquitin ... 34 3.1
UniRef50_Q54R08 Cluster: Putative uncharacterized protein; n=1; ... 29 3.5
UniRef50_A6NLV9 Cluster: Uncharacterized protein VAPB; n=1; Homo... 27 5.3
UniRef50_Q4T7P0 Cluster: Chromosome undetermined SCAF8068, whole... 33 5.4
UniRef50_UPI00015A451D Cluster: UPI00015A451D related cluster; n... 26 5.7
UniRef50_Q4Q158 Cluster: Putative uncharacterized protein; n=2; ... 33 7.1
UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Re... 27 7.8
UniRef50_Q08C51 Cluster: Zgc:153610; n=12; Euteleostomi|Rep: Zgc... 26 8.3
>UniRef50_Q4XJT6 Cluster: Putative uncharacterized protein; n=1;
Plasmodium chabaudi|Rep: Putative uncharacterized
protein - Plasmodium chabaudi
Length = 44
Score = 29.5 bits (63), Expect(2) = 0.11
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = -1
Query: 503 TNVVKYVFLIFDCVCVCVCL 444
T+V +++L+ CVCVCVC+
Sbjct: 4 TDVHHHIWLVCVCVCVCVCV 23
Score = 28.7 bits (61), Expect(2) = 0.11
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -1
Query: 467 CVCVCVCLFH 438
CVCVCVC++H
Sbjct: 22 CVCVCVCMYH 31
>UniRef50_Q170V7 Cluster: Putative uncharacterized protein; n=1;
Aedes aegypti|Rep: Putative uncharacterized protein -
Aedes aegypti (Yellowfever mosquito)
Length = 355
Score = 37.5 bits (83), Expect = 0.25
Identities = 17/39 (43%), Positives = 22/39 (56%)
Frame = +3
Query: 9 PKPTSPARGAPCRSTNEALAETWSQKNQKLSPQVRSTAT 125
P+PT PA +P R TN A + + N K SP R+T T
Sbjct: 200 PQPTKPAEKSPSRKTNSASKKKPKKSNSKSSPAKRTTTT 238
>UniRef50_UPI0000DBF0DB Cluster: UPI0000DBF0DB related cluster; n=2;
Rattus norvegicus|Rep: UPI0000DBF0DB UniRef100 entry -
Rattus norvegicus
Length = 278
Score = 29.1 bits (62), Expect(2) = 0.45
Identities = 14/37 (37%), Positives = 25/37 (67%), Gaps = 3/37 (8%)
Frame = -1
Query: 467 CVCVCVCLFH-NYSNSHIFD--YIKKHSYDIERLNIH 366
CVCVCVC+F Y+ ++I ++K+H+ ++ +IH
Sbjct: 222 CVCVCVCMFRCTYTITYIKHCCHLKQHTQKYQK-SIH 257
Score = 26.6 bits (56), Expect(2) = 0.45
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 476 IFDCVCVCVCL 444
IF CVCVCVC+
Sbjct: 213 IFVCVCVCVCV 223
>UniRef50_Q4TA27 Cluster: Chromosome undetermined SCAF7470, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7470,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 381
Score = 27.5 bits (58), Expect(2) = 1.3
Identities = 9/13 (69%), Positives = 10/13 (76%)
Frame = -1
Query: 467 CVCVCVCLFHNYS 429
CVCVCVC+ YS
Sbjct: 276 CVCVCVCVSQGYS 288
Score = 26.6 bits (56), Expect(2) = 1.3
Identities = 8/10 (80%), Positives = 10/10 (100%)
Frame = -1
Query: 473 FDCVCVCVCL 444
F+CVCVCVC+
Sbjct: 270 FNCVCVCVCV 279
>UniRef50_Q8C7P2 Cluster: 12 days embryo spinal cord cDNA, RIKEN
full-length enriched library, clone:C530050K14
product:hypothetical protein, full insert sequence (0
day neonate thymus cDNA, RIKEN full-length enriched
library, clone:A430098G12 product:phosphatidylinositol
3-kinase, regulatory subunit, polypeptide 1 (p85 alpha),
full insert sequence); n=1; Mus musculus|Rep: 12 days
embryo spinal cord cDNA, RIKEN full-length enriched
library, clone:C530050K14 product:hypothetical protein,
full insert sequence (0 day neonate thymus cDNA, RIKEN
full-length enriched library, clone:A430098G12
product:phosphatidylinositol 3-kinase, regulatory
subunit, polypeptide 1 (p85 alpha), full insert
sequence) - Mus musculus (Mouse)
Length = 109
Score = 27.5 bits (58), Expect(2) = 1.5
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNSHIFDYIK 402
CVCVCVC+F + +F IK
Sbjct: 39 CVCVCVCVFLYFFAIALFCLIK 60
Score = 26.6 bits (56), Expect(2) = 1.5
Identities = 8/12 (66%), Positives = 11/12 (91%)
Frame = -1
Query: 479 LIFDCVCVCVCL 444
L++ CVCVCVC+
Sbjct: 33 LVYVCVCVCVCV 44
>UniRef50_Q9D443 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4933415A04 product:hypothetical
protein, full insert sequence; n=1; Mus musculus|Rep:
Adult male testis cDNA, RIKEN full-length enriched
library, clone:4933415A04 product:hypothetical protein,
full insert sequence - Mus musculus (Mouse)
Length = 101
Score = 27.1 bits (57), Expect(2) = 2.0
Identities = 9/20 (45%), Positives = 14/20 (70%)
Frame = -1
Query: 503 TNVVKYVFLIFDCVCVCVCL 444
T++ F+ + CVCVCVC+
Sbjct: 23 TSIGTCTFVCYLCVCVCVCV 42
Score = 26.6 bits (56), Expect(2) = 2.0
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVCVCVC+F
Sbjct: 51 CVCVCVCMF 59
>UniRef50_Q4TBG6 Cluster: Chromosome undetermined SCAF7129, whole
genome shotgun sequence; n=1; Tetraodon
nigroviridis|Rep: Chromosome undetermined SCAF7129,
whole genome shotgun sequence - Tetraodon nigroviridis
(Green puffer)
Length = 1063
Score = 26.6 bits (56), Expect(2) = 2.6
Identities = 9/23 (39%), Positives = 13/23 (56%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNSHIFDYIKK 399
CVCVCVC+ H+F + +
Sbjct: 563 CVCVCVCVCGGGGRLHMFRQVPR 585
Score = 26.2 bits (55), Expect(2) = 2.6
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 470 DCVCVCVCL 444
DCVCVCVC+
Sbjct: 560 DCVCVCVCV 568
>UniRef50_Q3MJF2 Cluster: Il17rd protein; n=3; Mus musculus|Rep:
Il17rd protein - Mus musculus (Mouse)
Length = 140
Score = 28.7 bits (61), Expect(2) = 3.1
Identities = 9/14 (64%), Positives = 12/14 (85%)
Frame = -1
Query: 485 VFLIFDCVCVCVCL 444
+F +F CVCVCVC+
Sbjct: 43 IFNVFICVCVCVCV 56
Score = 24.2 bits (50), Expect(2) = 3.1
Identities = 7/10 (70%), Positives = 9/10 (90%)
Frame = -1
Query: 467 CVCVCVCLFH 438
CVCVCVC+ +
Sbjct: 51 CVCVCVCVLN 60
>UniRef50_UPI0000DB7C9F Cluster: PREDICTED: similar to ubiquitin
protein ligase E3A isoform 3; n=1; Apis mellifera|Rep:
PREDICTED: similar to ubiquitin protein ligase E3A
isoform 3 - Apis mellifera
Length = 898
Score = 33.9 bits (74), Expect = 3.1
Identities = 19/51 (37%), Positives = 26/51 (50%), Gaps = 2/51 (3%)
Frame = +3
Query: 6 EPKPTSPARGAPCRSTNEALAETW--SQKNQKLSPQVRSTATLPVRDDVSL 152
EP P S A+ P +S N ++ S N KL P TLPV+ D+S+
Sbjct: 99 EPGPASLAKSLPVKSVNPTCSDEGIASNFNIKLVPSTTDILTLPVKMDISV 149
>UniRef50_Q54R08 Cluster: Putative uncharacterized protein; n=1;
Dictyostelium discoideum AX4|Rep: Putative
uncharacterized protein - Dictyostelium discoideum AX4
Length = 46
Score = 28.7 bits (61), Expect(2) = 3.5
Identities = 9/11 (81%), Positives = 10/11 (90%)
Frame = -1
Query: 467 CVCVCVCLFHN 435
CVCVCVC+F N
Sbjct: 20 CVCVCVCVFEN 30
Score = 24.2 bits (50), Expect(2) = 3.5
Identities = 9/16 (56%), Positives = 12/16 (75%), Gaps = 1/16 (6%)
Frame = -1
Query: 488 YVF-LIFDCVCVCVCL 444
YV+ + CVCVCVC+
Sbjct: 10 YVYKCAYMCVCVCVCV 25
>UniRef50_A6NLV9 Cluster: Uncharacterized protein VAPB; n=1; Homo
sapiens|Rep: Uncharacterized protein VAPB - Homo sapiens
(Human)
Length = 132
Score = 26.6 bits (56), Expect(2) = 5.3
Identities = 9/15 (60%), Positives = 12/15 (80%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNS 423
CVCVCVC+F + +S
Sbjct: 40 CVCVCVCVFFFWLSS 54
Score = 25.4 bits (53), Expect(2) = 5.3
Identities = 11/17 (64%), Positives = 12/17 (70%), Gaps = 1/17 (5%)
Frame = -1
Query: 491 KYVFLIFD-CVCVCVCL 444
KYVF CVCVCVC+
Sbjct: 27 KYVFHDLTLCVCVCVCV 43
>UniRef50_Q4T7P0 Cluster: Chromosome undetermined SCAF8068, whole
genome shotgun sequence; n=7; Deuterostomia|Rep:
Chromosome undetermined SCAF8068, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 1001
Score = 33.1 bits (72), Expect = 5.4
Identities = 13/37 (35%), Positives = 22/37 (59%)
Frame = -1
Query: 494 VKYVFLIFDCVCVCVCLFHNYSNSHIFDYIKKHSYDI 384
++Y L+F C C+C F + S H+ +++K H DI
Sbjct: 959 MEYCVLLF---CCCICGFESTSKEHLMEHMKDHEGDI 992
>UniRef50_UPI00015A451D Cluster: UPI00015A451D related cluster; n=1;
Danio rerio|Rep: UPI00015A451D UniRef100 entry - Danio
rerio
Length = 1281
Score = 26.2 bits (55), Expect(2) = 5.7
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVCVCVC+F
Sbjct: 1012 CVCVCVCVF 1020
Score = 26.2 bits (55), Expect(2) = 9.6
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 476 IFDCVCVCVCL 444
+F CVCVCVC+
Sbjct: 1019 VFVCVCVCVCV 1029
Score = 25.4 bits (53), Expect(2) = 5.7
Identities = 8/14 (57%), Positives = 11/14 (78%)
Frame = -1
Query: 485 VFLIFDCVCVCVCL 444
+ +I CVCVCVC+
Sbjct: 1004 IIIICVCVCVCVCV 1017
Score = 24.6 bits (51), Expect(2) = 9.6
Identities = 9/12 (75%), Positives = 10/12 (83%), Gaps = 1/12 (8%)
Frame = -1
Query: 467 CVCVCVCL-FHN 435
CVCVCVC+ HN
Sbjct: 1032 CVCVCVCVCVHN 1043
>UniRef50_Q4Q158 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 580
Score = 32.7 bits (71), Expect = 7.1
Identities = 11/24 (45%), Positives = 14/24 (58%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNSHIFDYIKKH 396
CVCVC C++ YS H K+H
Sbjct: 7 CVCVCACMYGPYSEDHYAGPAKRH 30
>UniRef50_UPI00015A7172 Cluster: otopetrin 1; n=1; Danio rerio|Rep:
otopetrin 1 - Danio rerio
Length = 502
Score = 26.6 bits (56), Expect(2) = 7.8
Identities = 9/16 (56%), Positives = 10/16 (62%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNSH 420
CVCVCV + H N H
Sbjct: 249 CVCVCVSIVHFCKNDH 264
Score = 24.6 bits (51), Expect(2) = 7.8
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 470 DCVCVCVCL 444
+CVCVCVC+
Sbjct: 242 ECVCVCVCV 250
>UniRef50_Q08C51 Cluster: Zgc:153610; n=12; Euteleostomi|Rep:
Zgc:153610 - Danio rerio (Zebrafish) (Brachydanio rerio)
Length = 252
Score = 26.2 bits (55), Expect(2) = 8.3
Identities = 8/11 (72%), Positives = 10/11 (90%)
Frame = -1
Query: 476 IFDCVCVCVCL 444
+F CVCVCVC+
Sbjct: 216 VFVCVCVCVCV 226
Score = 25.0 bits (52), Expect(2) = 8.3
Identities = 8/9 (88%), Positives = 8/9 (88%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVCVCVC F
Sbjct: 243 CVCVCVCWF 251
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 474,383,052
Number of Sequences: 1657284
Number of extensions: 7965673
Number of successful extensions: 26214
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 22352
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25701
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 44392209541
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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