Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0056
(614 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens ... 26 2.1
BX640881-1|CAE45937.1| 999|Homo sapiens hypothetical protein pr... 31 3.2
BC110332-1|AAI10333.1| 412|Homo sapiens ZNF507 protein protein. 31 3.2
AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane hel... 26 4.5
AK125389-1|BAC86153.1| 147|Homo sapiens protein ( Homo sapiens ... 25 6.3
AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet re... 26 7.2
AB002110-1|BAB70694.1| 208|Homo sapiens Bradeion alpha protein. 25 7.8
BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment dom... 29 9.9
AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment dom... 29 9.9
>AK128797-1|BAC87611.1| 201|Homo sapiens protein ( Homo sapiens
cDNA FLJ45585 fis, clone BRTHA3013882. ).
Length = 201
Score = 25.8 bits (54), Expect(2) = 2.1
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVCVC+C+F
Sbjct: 134 CVCVCICVF 142
Score = 24.6 bits (51), Expect(2) = 2.1
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = -1
Query: 494 VKYVFLIFDCVCVCVCL 444
V F + CVC+CVC+
Sbjct: 121 VSVCFCVSVCVCLCVCV 137
>BX640881-1|CAE45937.1| 999|Homo sapiens hypothetical protein
protein.
Length = 999
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 494 VKYVFLIFDCVCVCVCLFHNYSNSHIFDYIKKHSYDI 384
++Y L+F C C+C F + S ++ D++K+H +I
Sbjct: 950 MEYCVLLF---CCCICGFESTSKENLLDHMKEHEGEI 983
>BC110332-1|AAI10333.1| 412|Homo sapiens ZNF507 protein protein.
Length = 412
Score = 31.1 bits (67), Expect = 3.2
Identities = 12/37 (32%), Positives = 23/37 (62%)
Frame = -1
Query: 494 VKYVFLIFDCVCVCVCLFHNYSNSHIFDYIKKHSYDI 384
++Y L+F C C+C F + S ++ D++K+H +I
Sbjct: 363 MEYCVLLF---CCCICGFESTSKENLLDHMKEHEGEI 396
>AB065580-1|BAC05810.1| 346|Homo sapiens seven transmembrane helix
receptor protein.
Length = 346
Score = 25.8 bits (54), Expect(3) = 4.5
Identities = 7/11 (63%), Positives = 10/11 (90%)
Frame = -1
Query: 476 IFDCVCVCVCL 444
+F CVC+CVC+
Sbjct: 47 VFVCVCICVCV 57
Score = 21.0 bits (42), Expect(3) = 4.5
Identities = 6/9 (66%), Positives = 8/9 (88%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVCV VC++
Sbjct: 76 CVCVSVCVY 84
Score = 20.6 bits (41), Expect(3) = 4.5
Identities = 6/15 (40%), Positives = 9/15 (60%)
Frame = -1
Query: 494 VKYVFLIFDCVCVCV 450
V ++ CVC+CV
Sbjct: 13 VSVCLYLYVCVCICV 27
>AK125389-1|BAC86153.1| 147|Homo sapiens protein ( Homo sapiens
cDNA FLJ43399 fis, clone OCBBF2009926. ).
Length = 147
Score = 24.6 bits (51), Expect(2) = 6.3
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 470 DCVCVCVCL 444
+CVCVCVC+
Sbjct: 74 ECVCVCVCV 82
Score = 24.2 bits (50), Expect(2) = 6.3
Identities = 9/22 (40%), Positives = 12/22 (54%)
Frame = -1
Query: 467 CVCVCVCLFHNYSNSHIFDYIK 402
CVCVCVC+ H++ K
Sbjct: 81 CVCVCVCVRVGVVLGHLWPVTK 102
>AY339211-1|AAQ02646.1| 532|Homo sapiens nonintegrin platelet
receptor for type I collagen protein.
Length = 532
Score = 26.2 bits (55), Expect(2) = 7.2
Identities = 8/9 (88%), Positives = 9/9 (100%)
Frame = -1
Query: 467 CVCVCVCLF 441
CVC+CVCLF
Sbjct: 37 CVCLCVCLF 45
Score = 22.2 bits (45), Expect(2) = 7.2
Identities = 7/19 (36%), Positives = 13/19 (68%)
Frame = -1
Query: 500 NVVKYVFLIFDCVCVCVCL 444
N++ ++L VCVC+C+
Sbjct: 24 NLIIGIYLYEKTVCVCLCV 42
>AB002110-1|BAB70694.1| 208|Homo sapiens Bradeion alpha protein.
Length = 208
Score = 24.6 bits (51), Expect(2) = 7.8
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 470 DCVCVCVCL 444
+CVCVCVC+
Sbjct: 142 ECVCVCVCV 150
Score = 23.8 bits (49), Expect(2) = 7.8
Identities = 7/12 (58%), Positives = 9/12 (75%)
Frame = -1
Query: 467 CVCVCVCLFHNY 432
CVC+CVC+ Y
Sbjct: 153 CVCLCVCVSGTY 164
>BC093825-1|AAH93825.1| 1037|Homo sapiens caspase recruitment domain
family, member 6 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 3 SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 131
S+P T P+ PC+ST ++ W S+ +Q PQ +S++T P
Sbjct: 977 SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
>AF356193-1|AAK32718.1| 1037|Homo sapiens caspase recruitment domain
protein 6 protein.
Length = 1037
Score = 29.5 bits (63), Expect = 9.9
Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
Frame = +3
Query: 3 SEPKPTSPARGAPCRSTNEALAETW---SQKNQKLSPQVRSTATLP 131
S+P T P+ PC+ST ++ W S+ +Q PQ +S++T P
Sbjct: 977 SQPSQTKPS---PCKSTQPKPSQPWPPQSKPSQPRPPQPKSSSTNP 1019
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 68,268,413
Number of Sequences: 237096
Number of extensions: 1167694
Number of successful extensions: 3409
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 3052
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3389
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6579110070
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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