Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0054
(605 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
L16530-1|AAA28161.1| 163|Caenorhabditis elegans ubiquitin-like:... 124 5e-29
AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-lik... 124 5e-29
Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical pr... 118 3e-27
U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin prote... 118 3e-27
U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin prote... 118 3e-27
M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin p... 118 3e-27
L31492-1|AAC37252.1| 128|Caenorhabditis elegans ubiquitin/ribos... 118 3e-27
Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical pr... 79 2e-15
AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical ... 70 1e-12
M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein ( C.ele... 53 2e-07
U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical pr... 48 4e-06
AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical ... 44 8e-05
U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical pr... 42 3e-04
U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical pr... 39 0.003
U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical pr... 38 0.004
AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-lik... 36 0.022
Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical pr... 35 0.052
U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein. 34 0.069
AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp (sp... 34 0.069
U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical p... 32 0.37
AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical ... 31 0.48
Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical pr... 29 2.6
L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membra... 29 2.6
U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical pr... 27 7.9
>L16530-1|AAA28161.1| 163|Caenorhabditis elegans
ubiquitin-like:ribosomal proteinfusion protein protein.
Length = 163
Score = 124 bits (299), Expect = 5e-29
Identities = 61/138 (44%), Positives = 83/138 (60%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVX 226
T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNL 65
Query: 227 XXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVF 406
Y+TP LAVL++YK+DENGKI RLR+EC CG GVF
Sbjct: 66 ELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVF 125
Query: 407 MAVMEDRHYCGKCHSTMV 460
MA +RHYCG+CH T+V
Sbjct: 126 MAQHANRHYCGRCHDTLV 143
>AC006651-4|AAF39865.1| 163|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform a protein.
Length = 163
Score = 124 bits (299), Expect = 5e-29
Identities = 61/138 (44%), Positives = 83/138 (60%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLVX 226
T+ LEV ++ + ++K KI+ EGIP +QRL +AG+QLED SD I E+T+++
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAGRQLED----SDCGIDSEATIYVNL 65
Query: 227 XXXXXXXXXXXXNYSTPXXXXXXXXXXXLAVLRFYKVDENGKIHRLRRECTGEQCGAGVF 406
Y+TP LAVL++YK+DENGKI RLR+EC CG GVF
Sbjct: 66 ELLGGAKKRKKKVYTTPKKNKRKPKKVKLAVLKYYKIDENGKITRLRKECQQPSCGGGVF 125
Query: 407 MAVMEDRHYCGKCHSTMV 460
MA +RHYCG+CH T+V
Sbjct: 126 MAQHANRHYCGRCHDTLV 143
>Z82083-1|CAB04967.1| 128|Caenorhabditis elegans Hypothetical
protein ZK1010.1 protein.
Length = 128
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>U23172-2|AAM22069.2| 538|Caenorhabditis elegans Ubiquitin protein
1, isoform c protein.
Length = 538
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 71.7 bits (168), Expect = 4e-13
Identities = 34/36 (94%), Positives = 35/36 (97%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAG 154
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAG
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAG 503
>U23172-1|AAC46525.1| 838|Caenorhabditis elegans Ubiquitin protein
1, isoform a protein.
Length = 838
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 544 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 620 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 696 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 772 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 830
>M23433-1|AAA28154.1| 838|Caenorhabditis elegans polyubiquitin
protein.
Length = 838
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 88 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 146
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 164 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 222
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 240 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 298
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 316 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 374
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 392 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 450
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 468 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 526
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 544 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 602
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 620 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 678
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 696 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 754
Score = 117 bits (281), Expect = 7e-27
Identities = 56/59 (94%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQK+STLHLV
Sbjct: 772 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKQSTLHLV 830
>L31492-1|AAC37252.1| 128|Caenorhabditis elegans
ubiquitin/ribosomal fusion protein protein.
Length = 128
Score = 118 bits (284), Expect = 3e-27
Identities = 57/59 (96%), Positives = 58/59 (98%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TITLEVE SDTIENVKAKIQDKEGIPP+QQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 70
>Z78420-1|CAB01708.1| 77|Caenorhabditis elegans Hypothetical
protein F45H11.2 protein.
Length = 77
Score = 79.0 bits (186), Expect = 2e-15
Identities = 33/58 (56%), Positives = 45/58 (77%)
Frame = +2
Query: 50 ITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
I L++EP+D +E +K K+++KEGIPP QQRLIFAGKQ+ D +T +DY + S LHLV
Sbjct: 13 IELDIEPNDRVERIKEKVEEKEGIPPPQQRLIFAGKQMNDDKTAADYKVLGGSVLHLV 70
>AF040645-8|AAB94982.1| 292|Caenorhabditis elegans Hypothetical
protein F52C6.4 protein.
Length = 292
Score = 69.7 bits (163), Expect = 1e-12
Identities = 30/59 (50%), Positives = 43/59 (72%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV 223
TI + ++ +DT+E +K K+Q+K G+PP+QQRLIF QLE+ R L YNI+ E +HLV
Sbjct: 172 TIPISIKNTDTVETLKFKVQNKHGVPPDQQRLIFGRAQLENDRALFAYNIRDEDIIHLV 230
Score = 36.7 bits (81), Expect = 0.013
Identities = 19/55 (34%), Positives = 31/55 (56%)
Frame = +2
Query: 56 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
+ VE SD I+++ K+ + + P ++ +D RT+SDYNI+ STL L
Sbjct: 103 ITVEASDAIKDLNFKVAEAQRKPHQPSNIVLC----KDQRTISDYNIKNGSTLRL 153
>M21321-1|AAA28153.1| 37|Caenorhabditis elegans protein (
C.elegans ubiquitin A(UbiA) gene, 5' end. ).
Length = 37
Score = 52.8 bits (121), Expect = 2e-07
Identities = 25/26 (96%), Positives = 25/26 (96%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIP 124
TITLEVE SDTIENVKAKIQDKEGIP
Sbjct: 12 TITLEVEASDTIENVKAKIQDKEGIP 37
>U80452-4|AAB37860.1| 226|Caenorhabditis elegans Hypothetical
protein C16C8.4 protein.
Length = 226
Score = 48.4 bits (110), Expect = 4e-06
Identities = 21/52 (40%), Positives = 34/52 (65%)
Frame = +2
Query: 59 EVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 214
++ DT+ ++K I+ + IP + L F+GK+LED ++ DYNIQK ST+
Sbjct: 168 KIHREDTVFDIKNDIEHRHDIPQHSYWLSFSGKRLEDHCSIGDYNIQKSSTI 219
>AF040645-9|AAB94972.2| 197|Caenorhabditis elegans Hypothetical
protein F52C6.3 protein.
Length = 197
Score = 44.0 bits (99), Expect = 8e-05
Identities = 27/67 (40%), Positives = 37/67 (55%), Gaps = 3/67 (4%)
Frame = +2
Query: 29 VPSRASTITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLE---DGRTLSDYNIQ 199
V + T TL+ SDT+ +VKAKI +K I PN Q+L+ L+ D TL D + +
Sbjct: 107 VENAGRTCTLDTSASDTMASVKAKIWEKLRILPNTQKLLLENWDLDLFSDHSTLFDNSFE 166
Query: 200 KESTLHL 220
STL L
Sbjct: 167 NGSTLRL 173
>U80452-8|AAB37855.1| 244|Caenorhabditis elegans Hypothetical
protein C16C8.13 protein.
Length = 244
Score = 42.3 bits (95), Expect = 3e-04
Identities = 24/55 (43%), Positives = 30/55 (54%)
Frame = +2
Query: 56 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
L V SDTI VK I + + R++ K LED TL+ YNIQ+ STL L
Sbjct: 187 LWVRGSDTIRQVKLTINSLANVDISSFRMVLRDKVLEDDHTLAYYNIQEGSTLGL 241
>U80452-6|AAB37858.1| 592|Caenorhabditis elegans Hypothetical
protein C16C8.16 protein.
Length = 592
Score = 38.7 bits (86), Expect = 0.003
Identities = 20/55 (36%), Positives = 32/55 (58%)
Frame = +2
Query: 56 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
L V SDTI ++K +I + + R++ GK LED +L+ YNIQ+ + + L
Sbjct: 210 LRVCGSDTIRHIKLRINSLAKVDISSFRMVLRGKLLEDHHSLAYYNIQEGALIWL 264
>U80452-7|AAB37856.1| 233|Caenorhabditis elegans Hypothetical
protein C16C8.14 protein.
Length = 233
Score = 38.3 bits (85), Expect = 0.004
Identities = 22/53 (41%), Positives = 28/53 (52%)
Frame = +2
Query: 56 LEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 214
L V SDTI +K +I GI R K LED TL+ YNI++ ST+
Sbjct: 176 LRVCGSDTIRQIKPRINSLAGIDTISFRTFCDDKFLEDDHTLAHYNIREGSTI 228
>AC006651-5|AAM48542.1| 47|Caenorhabditis elegans Ubiquitin-like
family protein 1,isoform b protein.
Length = 47
Score = 35.9 bits (79), Expect = 0.022
Identities = 15/37 (40%), Positives = 25/37 (67%)
Frame = +2
Query: 47 TITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGK 157
T+ LEV ++ + ++K KI+ EGIP +QRL +A +
Sbjct: 10 TLFLEVAANEDVLSIKQKIEAAEGIPAEEQRLCYAAR 46
>Z32681-5|CAA83606.1| 341|Caenorhabditis elegans Hypothetical
protein F56F3.4 protein.
Length = 341
Score = 34.7 bits (76), Expect = 0.052
Identities = 15/56 (26%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Frame = +2
Query: 50 ITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLED-GRTLSDYNIQKESTL 214
I +E++ +T+ +K +I+ + + N+Q L+F G +L+D +T++D I ++ +
Sbjct: 34 IVVEMKDKETVSILKNRIEQETEVLTNRQVLLFKGMELKDNNKTMTDCGINSDAKI 89
>U09415-1|AAA82164.1| 655|Caenorhabditis elegans Ceprp21 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/59 (23%), Positives = 34/59 (57%)
Frame = +2
Query: 44 STITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
S + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 587 SIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>AF106576-5|AAC78179.1| 655|Caenorhabditis elegans Yeast prp
(splicing factor) relatedprotein 21 protein.
Length = 655
Score = 34.3 bits (75), Expect = 0.069
Identities = 14/59 (23%), Positives = 34/59 (57%)
Frame = +2
Query: 44 STITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTLHL 220
S + ++ + + +K +IQD+ G+P +Q+L+ G ++D + + YN+ + ++L
Sbjct: 587 SIVQFTIQVTAPMSELKQQIQDRYGMPVGKQKLMSDGLFVKDNMSSAFYNLADRTAIYL 645
>U80452-10|AAB37853.1| 214|Caenorhabditis elegans Hypothetical
protein C16C8.11 protein.
Length = 214
Score = 31.9 bits (69), Expect = 0.37
Identities = 15/39 (38%), Positives = 24/39 (61%)
Frame = +2
Query: 74 DTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDY 190
+++E +K KI+ + GIP + L GK L D + L+DY
Sbjct: 163 ESVEQLKMKIECQTGIPRTKFWLRLHGKPLYDDKKLADY 201
>AF099917-6|AAC68780.1| 264|Caenorhabditis elegans Hypothetical
protein F54D10.7 protein.
Length = 264
Score = 31.5 bits (68), Expect = 0.48
Identities = 17/57 (29%), Positives = 31/57 (54%)
Frame = +2
Query: 44 STITLEVEPSDTIENVKAKIQDKEGIPPNQQRLIFAGKQLEDGRTLSDYNIQKESTL 214
S I +E++ DTI V + G+ ++QRL+ K+L+ +TL + I+ S +
Sbjct: 192 SRIPMELDSLDTIYTVGMALLKHGGLALHRQRLMLNDKELQYNQTLEEAGIKDGSVI 248
>Z93395-7|CAH04744.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93395-6|CAB07708.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-4|CAB07707.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93395-3|CAB07706.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-9|CAH04704.1| 2389|Caenorhabditis elegans Hypothetical protein
ZC101.2f protein.
Length = 2389
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1258 SRPGGAPLPSGVQEQQGILHIPRASDQ 1284
>Z93375-8|CAB07569.1| 3375|Caenorhabditis elegans Hypothetical protein
ZC101.2e protein.
Length = 3375
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-7|CAB07568.1| 2295|Caenorhabditis elegans Hypothetical protein
ZC101.2c protein.
Length = 2295
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>Z93375-6|CAB07567.1| 2482|Caenorhabditis elegans Hypothetical protein
ZC101.2a protein.
Length = 2482
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1351 SRPGGAPLPSGVQEQQGILHIPRASDQ 1377
>L13458-1|AAA28156.1| 2481|Caenorhabditis elegans basement membrane
proteoglycan protein.
Length = 2481
Score = 29.1 bits (62), Expect = 2.6
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = -1
Query: 227 STPGGGWIPSGYCSPRGYVHLPAAFQQ 147
S PGG +PSG +G +H+P A Q
Sbjct: 1350 SRPGGAPLPSGVQEQQGILHIPRASDQ 1376
>U80452-5|AAB37859.1| 180|Caenorhabditis elegans Hypothetical
protein C16C8.5 protein.
Length = 180
Score = 27.5 bits (58), Expect = 7.9
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +2
Query: 140 LIFAGKQLEDGRTLSDYNIQKESTLHL 220
L + G++L+D R++ YNI + ++L
Sbjct: 129 LYYGGQKLQDNRSIGSYNIDQSREIYL 155
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,327,062
Number of Sequences: 27780
Number of extensions: 239871
Number of successful extensions: 684
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 606
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 682
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1300523034
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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