Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0051
         (650 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P49657 Cluster: Serine/threonine-protein kinase minibra...    42   0.010
UniRef50_Q13627 Cluster: Dual specificity tyrosine-phosphorylati...    39   0.12 
UniRef50_A5E5A0 Cluster: Putative uncharacterized protein; n=1; ...    33   5.9  
UniRef50_Q9Y463 Cluster: Dual specificity tyrosine-phosphorylati...    33   7.8  

>UniRef50_P49657 Cluster: Serine/threonine-protein kinase minibrain;
           n=25; Coelomata|Rep: Serine/threonine-protein kinase
           minibrain - Drosophila melanogaster (Fruit fly)
          Length = 908

 Score = 42.3 bits (95), Expect = 0.010
 Identities = 25/71 (35%), Positives = 33/71 (46%), Gaps = 11/71 (15%)
 Frame = +3

Query: 444 GGERRXVPLYGRXGAEXQLXXMXXP-----------SNXXAXHXXVPHHFXDPSTAPLRK 590
           GG +R  PLYGR      L                 S   A    +P+HF +P++ PLRK
Sbjct: 40  GGRQRHAPLYGRFVDAEDLPATHRDVMHHHSSPSSSSEVRAMQARIPNHFREPASGPLRK 99

Query: 591 LTXYLXKTYRH 623
           L+  L KTY+H
Sbjct: 100 LSVDLIKTYKH 110


>UniRef50_Q13627 Cluster: Dual specificity
           tyrosine-phosphorylation-regulated kinase 1A; n=43;
           Deuterostomia|Rep: Dual specificity
           tyrosine-phosphorylation-regulated kinase 1A - Homo
           sapiens (Human)
          Length = 763

 Score = 38.7 bits (86), Expect = 0.12
 Identities = 16/26 (61%), Positives = 20/26 (76%)
 Frame = +3

Query: 546 VPHHFXDPSTAPLRKLTXYLXKTYRH 623
           +P  F DP+TAPLRKL+  L KTY+H
Sbjct: 81  MPQTFRDPATAPLRKLSVDLIKTYKH 106


>UniRef50_A5E5A0 Cluster: Putative uncharacterized protein; n=1;
           Lodderomyces elongisporus NRRL YB-4239|Rep: Putative
           uncharacterized protein - Lodderomyces elongisporus
           (Yeast) (Saccharomyces elongisporus)
          Length = 571

 Score = 33.1 bits (72), Expect = 5.9
 Identities = 17/51 (33%), Positives = 27/51 (52%)
 Frame = +1

Query: 163 PITFIRSV*KIKSNSNEVLILWTMIIAIILKDVFFRVNKMLILKLGHHVER 315
           P+T   S  K K++ +E  I W M+  I+ KD F +V +  +  L HH  +
Sbjct: 222 PMTHTSSKEKAKNSPSEWKIFWLMLNDIVGKDKFAKVGQYTLRLLVHHANQ 272


>UniRef50_Q9Y463 Cluster: Dual specificity
           tyrosine-phosphorylation-regulated kinase 1B; n=39;
           Eukaryota|Rep: Dual specificity
           tyrosine-phosphorylation-regulated kinase 1B - Homo
           sapiens (Human)
          Length = 629

 Score = 32.7 bits (71), Expect = 7.8
 Identities = 14/26 (53%), Positives = 19/26 (73%)
 Frame = +3

Query: 546 VPHHFXDPSTAPLRKLTXYLXKTYRH 623
           +P  F D ++APLRKL+  L KTY+H
Sbjct: 33  LPLAFRDATSAPLRKLSVDLIKTYKH 58


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,631,444
Number of Sequences: 1657284
Number of extensions: 7796154
Number of successful extensions: 12582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12582
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 48760335122
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)