Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0050
(600 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein ... 22 3.4
AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax pr... 22 4.6
AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax pr... 21 7.9
AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax pr... 21 7.9
AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esteras... 21 7.9
AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esteras... 21 7.9
AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esteras... 21 7.9
AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esteras... 21 7.9
AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax pr... 21 7.9
AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax pr... 21 7.9
AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax pr... 21 7.9
AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein. 21 7.9
AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax pr... 21 7.9
AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduce... 21 7.9
>AF236856-1|AAG17563.2| 370|Tribolium castaneum Kruppel protein
protein.
Length = 370
Score = 22.2 bits (45), Expect = 3.4
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Frame = +3
Query: 87 LPHCQSSFPPTTPASVQRK-PLSSKLFPSLPKFQRVLLKSSTMYTS 221
+P Q + P Q K PLSS +PS+ ++L+ S M S
Sbjct: 1 MPLLQETTPKRDMLDSQEKTPLSSVSYPSMFTPSQLLMASHLMAAS 46
>AY055847-1|AAL23667.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.8 bits (44), Expect = 4.6
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRISGAKIVPESYTCLTT 301
L+TP+ + A +SSGL S +S + P TT
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTT 162
>AY055846-1|AAL26542.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AY055845-1|AAL23670.2| 230|Tribolium castaneum cephalothorax
protein.
Length = 230
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AJ850297-1|CAH64517.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 251 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 364
+ T +N +SP S GL + SGT+ P L +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850295-1|CAH64515.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 251 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 364
+ T +N +SP S GL + SGT+ P L +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850294-1|CAH64514.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 251 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 364
+ T +N +SP S GL + SGT+ P L +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AJ850292-1|CAH64512.1| 539|Tribolium castaneum putative esterase
protein.
Length = 539
Score = 21.0 bits (42), Expect = 7.9
Identities = 13/38 (34%), Positives = 19/38 (50%)
Frame = +2
Query: 251 EATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKP 364
+ T +N +SP S GL + SGT+ P L +P
Sbjct: 198 DGTSVNFHYLSPQSRGLFHRGWSMSGTMLVPWALMEQP 235
>AF426396-1|AAL27023.2| 312|Tribolium castaneum cephalothorax
protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF426395-1|AAL27022.2| 297|Tribolium castaneum cephalothorax
protein.
Length = 297
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF416773-1|AAL09697.1| 268|Tribolium castaneum cephalothorax
protein.
Length = 268
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 85 LSTPSNSNATKSSGLTSPLS 104
>AF321227-2|AAK16422.1| 312|Tribolium castaneum Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF261823-1|AAG13010.1| 157|Tribolium castaneum cephalothorax
protein.
Length = 157
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
>AF227628-1|AAF42868.1| 312|Tribolium castaneum sex combs reduced
Scr protein.
Length = 312
Score = 21.0 bits (42), Expect = 7.9
Identities = 10/20 (50%), Positives = 15/20 (75%)
Frame = -1
Query: 402 LATPAWNLARRSSGLMSRIS 343
L+TP+ + A +SSGL S +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLS 148
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 143,525
Number of Sequences: 336
Number of extensions: 3401
Number of successful extensions: 17
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15143945
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -