Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0050
(600 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic ri... 231 2e-60
BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, larg... 231 2e-60
AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0 va... 231 2e-60
AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein. 231 2e-60
BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, larg... 229 6e-60
AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0 va... 227 2e-59
AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein. 226 5e-59
BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein. 135 1e-31
BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein. 94 4e-19
BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein. 94 4e-19
AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0 pr... 55 2e-07
L07518-1|AAB61945.1| 505|Homo sapiens mucin protein. 38 0.027
BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.036
BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog... 38 0.036
AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protei... 38 0.036
AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolo... 38 0.036
AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens ... 38 0.036
AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal pr... 38 0.036
AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens ... 34 0.44
M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein. 31 2.3
BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein. 31 2.3
AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alph... 31 2.3
AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alph... 31 2.3
AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alph... 31 2.3
BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein. 31 3.1
AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo pr... 31 3.1
AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens ... 31 3.1
U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoi... 31 4.1
>M17885-1|AAA36470.1| 317|Homo sapiens protein ( Human acidic
ribosomal phosphoprotein P0 mRNA, complete cds. ).
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC015690-1|AAH15690.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC015173-1|AAH15173.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC009867-1|AAH09867.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC008594-1|AAH08594.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC008092-1|AAH08092.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC005863-1|AAH05863.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC003655-1|AAH03655.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC001834-1|AAH01834.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC000752-1|AAH00752.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC000345-1|AAH00345.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC000087-1|AAH00087.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>AK222468-1|BAD96188.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>AC004263-1|AAC05176.1| 317|Homo sapiens WUGSC:H_278C19.2 protein.
Length = 317
Score = 231 bits (564), Expect = 2e-60
Identities = 111/179 (62%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>BC001127-1|AAH01127.1| 317|Homo sapiens ribosomal protein, large,
P0 protein.
Length = 317
Score = 229 bits (560), Expect = 6e-60
Identities = 110/179 (61%), Positives = 134/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG++ +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYERVLALSVETDYTFPLAEKVKAFLADPS 273
>AK222571-1|BAD96291.1| 317|Homo sapiens ribosomal protein P0
variant protein.
Length = 317
Score = 227 bits (556), Expect = 2e-59
Identities = 110/179 (61%), Positives = 133/179 (74%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSF QAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFSQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 273
>AY064377-1|AAL62450.1| 317|Homo sapiens BLOCK 23 protein.
Length = 317
Score = 226 bits (552), Expect = 5e-59
Identities = 109/179 (60%), Positives = 132/179 (73%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 INDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAK 382
++DV ++K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LD E L ++
Sbjct: 155 LSDVQLIKTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDKTEETLHSR 214
Query: 383 FQAGVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
F GV NVA++ L GYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 215 FLEGVRNVASVCLQTGYPTVASVPHSIINGYKRVLALSVETDYTFPLAENVKAFLADPS 273
>BC104645-1|AAI04646.1| 157|Homo sapiens RPLP0 protein protein.
Length = 157
Score = 135 bits (326), Expect = 1e-31
Identities = 64/112 (57%), Positives = 80/112 (71%)
Frame = +2
Query: 224 KPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVAN 403
K GDKVGASEATLLNMLNISPFS+GLV++QV+D+G+I+ PE+LDI E L ++F GV N
Sbjct: 2 KTGDKVGASEATLLNMLNISPFSFGLVIQQVFDNGSIYNPEVLDITEETLHSRFLEGVRN 61
Query: 404 VAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
VA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 62 VASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 113
>BC107717-1|AAI07718.1| 255|Homo sapiens RPLP0 protein protein.
Length = 255
Score = 93.9 bits (223), Expect = 4e-19
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 95 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 154
Query: 203 I 205
+
Sbjct: 155 L 155
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 392 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 156 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 211
>BC070194-1|AAH70194.1| 254|Homo sapiens RPLP0 protein protein.
Length = 254
Score = 93.9 bits (223), Expect = 4e-19
Identities = 45/61 (73%), Positives = 49/61 (80%)
Frame = +2
Query: 23 LVEVRDKLLENKVQAPARPGAIAPLSVVIPAHNTGLGPEKTSFFQALSIPTKISKGTIEI 202
L E+RD LL NKV A AR GAIAP V +PA NTGLGPEKTSFFQAL I TKIS+GTIEI
Sbjct: 94 LTEIRDMLLANKVPAAARAGAIAPCEVTVPAQNTGLGPEKTSFFQALGITTKISRGTIEI 153
Query: 203 I 205
+
Sbjct: 154 L 154
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 392 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 155 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 210
>AB007187-1|BAA25845.1| 93|Homo sapiens ribosomal protein P0
protein.
Length = 93
Score = 54.8 bits (126), Expect = 2e-07
Identities = 26/56 (46%), Positives = 32/56 (57%)
Frame = +2
Query: 392 GVANVAALSLAIGYPTIASAPHSIANGFKNLLXXXXXXXXXXXXXXXXKEFIKDPS 559
GV NVA++ L IGYPT+AS PHSI NG+K +L K F+ DPS
Sbjct: 1 GVRNVASVCLQIGYPTVASVPHSIINGYKRVLALSVETDYTFPLAEKVKAFLADPS 56
>L07518-1|AAB61945.1| 505|Homo sapiens mucin protein.
Length = 505
Score = 37.9 bits (84), Expect = 0.027
Identities = 28/99 (28%), Positives = 40/99 (40%), Gaps = 1/99 (1%)
Frame = +3
Query: 9 HPRXTSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 188
HP T + ++ SR PV +S P TP + P S S
Sbjct: 253 HPEVTPTSTTNVTPKSTSRDTSTPVTHTTSATSSRPPTPITTHSSPTRSSPLSSTGPMTA 312
Query: 189 VLLKSSTMYTS*S-PVTRLELLKPPFSTC*TSLHSHMVL 302
+K++T Y + S P T L PPFST + +H V+
Sbjct: 313 TSIKTTTTYPTPSHPQTTLTTHVPPFSTSSVTPSTHTVI 351
>BC006504-1|AAH06504.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>BC003013-1|AAH03013.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AY303790-1|AAP68821.1| 239|Homo sapiens acidic ribosomal protein
PO-like protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AL035413-12|CAI22233.1| 239|Homo sapiens mRNA turnover 4 homolog
(S. cerevisiae) protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK027569-1|BAB55205.1| 239|Homo sapiens protein ( Homo sapiens
cDNA FLJ14663 fis, clone NT2RP2002862, weakly similar to
60S ACIDIC RIBOSOMAL PROTEIN P0. ).
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AF173378-1|AAD52608.1| 239|Homo sapiens 60S acidic ribosomal
protein PO protein.
Length = 239
Score = 37.5 bits (83), Expect = 0.036
Identities = 16/69 (23%), Positives = 36/69 (52%)
Frame = +2
Query: 161 LSIPTKISKGTIEIINDVHILKPGDKVGASEATLLNMLNISPFSYGLVVKQVYDSGTIFA 340
L +PT + +G + +++D + K GD + +A +L + + + +K ++DS +
Sbjct: 156 LGLPTALKRGVVTLLSDYEVCKEGDVLTPEQARVLKLFGYEMAEFKVTIKYMWDSQSGRF 215
Query: 341 PEILDIKPE 367
++ D PE
Sbjct: 216 QQMGDDLPE 224
>AK096772-1|BAC04860.1| 577|Homo sapiens protein ( Homo sapiens
cDNA FLJ39453 fis, clone PROST2010046, highly similar to
Homo sapiens secretory mucin MUC6 (MUC6) mRNA. ).
Length = 577
Score = 33.9 bits (74), Expect = 0.44
Identities = 27/100 (27%), Positives = 39/100 (39%), Gaps = 1/100 (1%)
Frame = +3
Query: 9 HPRXTSLRSVTNCWRTKSRLQLVPVPLPHCQSSFPPTTPASVQRKPLSSKLFPSLPKFQR 188
HP T + ++ S PV SS TP + P S F S
Sbjct: 65 HPEVTPTSTTNITFKHTSTGTRTPVAHTTSASSSRLPTPFTTHSPPTGSSPFSSTGPMTA 124
Query: 189 VLLKSSTMYTS*S-PVTRLELLKPPFSTC*TSLHSHMVLL 305
+++T Y + S P T L PPFST + +H V++
Sbjct: 125 TSFQTTTTYPTPSHPQTTLPTHVPPFSTSLVTPSTHTVII 164
>M91669-1|AAA35605.1| 1532|Homo sapiens autoantigen protein.
Length = 1532
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 408 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 229
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 249 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 307
Query: 228 GFKMCTSL 205
G +S+
Sbjct: 308 GLSTSSSV 315
>BC004478-1|AAH04478.1| 393|Homo sapiens COL17A1 protein protein.
Length = 393
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 408 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 229
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 228 GFKMCTSL 205
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-6|CAM13376.1| 417|Homo sapiens collagen type XVII alpha 1
protein.
Length = 417
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 408 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 229
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 228 GFKMCTSL 205
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-5|CAC00589.1| 1497|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1497
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 408 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 229
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 228 GFKMCTSL 205
G +S+
Sbjct: 273 GLSTSSSV 280
>AL138761-4|CAI12398.1| 1415|Homo sapiens collagen type XVII alpha 1
protein.
Length = 1415
Score = 31.5 bits (68), Expect = 2.3
Identities = 18/68 (26%), Positives = 30/68 (44%)
Frame = -1
Query: 408 ATLATPAWNLARRSSGLMSRISGAKIVPESYTCLTTRPYENGEMFNMLRRVASEAPTLSP 229
A L + W+ + M + +S + L T Y G +F + +AS +PTL P
Sbjct: 214 ANLPSHVWSSTLPAGSSMGTYHN-NMTTQSSSLLNTNAYSAGSVFGVPNNMASCSPTLHP 272
Query: 228 GFKMCTSL 205
G +S+
Sbjct: 273 GLSTSSSV 280
>BC053670-1|AAH53670.1| 568|Homo sapiens CES3 protein protein.
Length = 568
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 242 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 418
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AY358609-1|AAQ88972.1| 571|Homo sapiens carboxylesterase Hlo
protein.
Length = 571
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 242 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 418
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 228 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 282
>AK097538-1|BAC05093.1| 207|Homo sapiens protein ( Homo sapiens
cDNA FLJ40219 fis, clone TESTI2021637, moderately
similar to LIVER CARBOXYLESTERASE PRECURSOR (EC
3.1.1.1). ).
Length = 207
Score = 31.1 bits (67), Expect = 3.1
Identities = 19/59 (32%), Positives = 31/59 (52%)
Frame = +2
Query: 242 GASEATLLNMLNISPFSYGLVVKQVYDSGTIFAPEILDIKPEDLRAKFQAGVANVAALS 418
G++ ++++ L +SP + GL + + SG I P I+D P L K +AN A S
Sbjct: 85 GSAGGSIISGLVLSPVAAGLFHRAITQSGVITTPGIIDSHPWPLAQK----IANTLACS 139
>U76604-1|AAB51499.1| 1497|Homo sapiens 180 kDa bullous pemphigoid
antigen 2/type XVII collagen protein.
Length = 1497
Score = 30.7 bits (66), Expect = 4.1
Identities = 14/40 (35%), Positives = 22/40 (55%)
Frame = -1
Query: 324 ESYTCLTTRPYENGEMFNMLRRVASEAPTLSPGFKMCTSL 205
+S + L T Y G +F + +AS +PTL PG +S+
Sbjct: 241 QSSSLLNTNAYSAGSVFGVPNNMASCSPTLHPGLSTSSSV 280
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 93,554,822
Number of Sequences: 237096
Number of extensions: 2195451
Number of successful extensions: 5727
Number of sequences better than 10.0: 38
Number of HSP's better than 10.0 without gapping: 5444
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5722
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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