Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0047
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative transcrip...    33   0.006
CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskel...    24   3.6  

>AJ438610-4|CAD27476.1|  593|Anopheles gambiae putative
           transcription factor protein.
          Length = 593

 Score = 33.5 bits (73), Expect = 0.006
 Identities = 14/35 (40%), Positives = 22/35 (62%)
 Frame = +2

Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR 436
           +YA LI  AI  ++D ++TL++IY W      YF+
Sbjct: 120 SYADLITQAISSASDSRLTLSQIYEWMVQNVPYFK 154


>CR954257-12|CAJ14163.1| 1645|Anopheles gambiae putative cytoskeletal
            structural protein protein.
          Length = 1645

 Score = 24.2 bits (50), Expect = 3.6
 Identities = 7/11 (63%), Positives = 9/11 (81%)
 Frame = -2

Query: 151  HHGGQAVPLAP 119
            HHGG+ VP+ P
Sbjct: 1325 HHGGEGVPMGP 1335


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 451,775
Number of Sequences: 2352
Number of extensions: 7050
Number of successful extensions: 9
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)