Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0047
(650 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 123 1e-28
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 123 1e-28
AF098987-7|AAC67430.1| 310|Caenorhabditis elegans Forkhead tran... 63 1e-10
Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical pr... 62 3e-10
Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical pr... 62 3e-10
U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork head/HNF-3... 62 3e-10
U80444-10|AAB37792.2| 362|Caenorhabditis elegans Lethal protein... 58 4e-09
L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein ... 57 1e-08
AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell... 57 1e-08
Z49125-2|CAA88935.1| 333|Caenorhabditis elegans Hypothetical pr... 54 7e-08
U39848-8|AAA80692.1| 323|Caenorhabditis elegans Forkhead transc... 54 7e-08
Z81038-11|CAB02761.1| 230|Caenorhabditis elegans Hypothetical p... 54 9e-08
U41268-3|AAA82436.1| 270|Caenorhabditis elegans Forkhead transc... 54 1e-07
Z28377-1|CAA82226.1| 264|Caenorhabditis elegans PES-1A protein ... 47 1e-05
Z28376-1|CAA82225.1| 228|Caenorhabditis elegans PES-1B protein ... 47 1e-05
Z28375-1|CAA82224.1| 264|Caenorhabditis elegans PES-1 protein. 47 1e-05
U64609-3|AAB04600.1| 264|Caenorhabditis elegans Patterned expre... 47 1e-05
AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal daue... 47 1e-05
AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal daue... 47 1e-05
AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein. 47 1e-05
AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork head-rel... 47 1e-05
AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork head-rel... 47 1e-05
U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead transc... 42 3e-04
U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead transc... 42 3e-04
AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal daue... 42 4e-04
AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork head-rel... 42 4e-04
U41268-4|AAL02521.1| 168|Caenorhabditis elegans Forkhead transc... 41 9e-04
U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead trans... 40 0.002
Z92827-7|CAB07324.1| 368|Caenorhabditis elegans Hypothetical pr... 39 0.004
Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical pr... 39 0.004
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 123 bits (297), Expect = 1e-28
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +2
Query: 230 PVRRRVSDKSGVAIAGEIQRNREFYKTADVRPPFTYAYLIRXAIIESADKQVTLNEIYNW 409
P R R+SDK+ IA +I +NR+FY+T DVRPP+TYA LIR AI+ES+D Q+TLNEIY W
Sbjct: 347 PRRSRISDKTVQPIATDIAKNRDFYRTNDVRPPYTYASLIRQAIMESSDCQLTLNEIYTW 406
Query: 410 XQSTFCYFRRNAXTWKNAVRHNL 478
TF YFRRNA TWKNAVRHNL
Sbjct: 407 FTETFAYFRRNAATWKNAVRHNL 429
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 123 bits (297), Expect = 1e-28
Identities = 56/83 (67%), Positives = 66/83 (79%)
Frame = +2
Query: 230 PVRRRVSDKSGVAIAGEIQRNREFYKTADVRPPFTYAYLIRXAIIESADKQVTLNEIYNW 409
P R R+SDK+ IA +I +NR+FY+T DVRPP+TYA LIR AI+ES+D Q+TLNEIY W
Sbjct: 533 PRRSRISDKTVQPIATDIAKNRDFYRTNDVRPPYTYASLIRQAIMESSDCQLTLNEIYTW 592
Query: 410 XQSTFCYFRRNAXTWKNAVRHNL 478
TF YFRRNA TWKNAVRHNL
Sbjct: 593 FTETFAYFRRNAATWKNAVRHNL 615
>AF098987-7|AAC67430.1| 310|Caenorhabditis elegans Forkhead
transcription factor familyprotein 8 protein.
Length = 310
Score = 63.3 bits (147), Expect = 1e-10
Identities = 37/87 (42%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Frame = +2
Query: 257 SGVAIAGEIQRNREFYKTADVRPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR 436
S VA A E +R R F AD +PP++Y+ LIR AI ++ DK+ TL EIY++ F ++R
Sbjct: 37 SPVAPAHEGKRRRIF-DGAD-KPPYSYSQLIRLAIEDTPDKKCTLAEIYSFIAHNFQFYR 94
Query: 437 RNA-XTWKNAVRHNLXXXQMLYARXER 514
N +WKN++RHNL + ++R E+
Sbjct: 95 ENRNSSWKNSIRHNLSLNKQ-FSRIEK 120
>Z92833-5|CAK12560.1| 411|Caenorhabditis elegans Hypothetical
protein F38A6.1c protein.
Length = 411
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y LI AI +S +Q+TL+EIYNW F Y++ N W+N++RH+L
Sbjct: 141 KPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSL 193
>Z92833-4|CAK12559.1| 442|Caenorhabditis elegans Hypothetical
protein F38A6.1b protein.
Length = 442
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y LI AI +S +Q+TL+EIYNW F Y++ N W+N++RH+L
Sbjct: 172 KPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSL 224
>Z92833-3|CAB07378.1| 506|Caenorhabditis elegans Hypothetical
protein F38A6.1a protein.
Length = 506
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y LI AI +S +Q+TL+EIYNW F Y++ N W+N++RH+L
Sbjct: 236 KPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSL 288
>U51163-1|AAA96319.1| 506|Caenorhabditis elegans fork
head/HNF-3-like protein protein.
Length = 506
Score = 62.1 bits (144), Expect = 3e-10
Identities = 24/53 (45%), Positives = 37/53 (69%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y LI AI +S +Q+TL+EIYNW F Y++ N W+N++RH+L
Sbjct: 236 KPPYSYISLITMAIQKSNSRQLTLSEIYNWIMDLFPYYQNNQQRWQNSIRHSL 288
>U80444-10|AAB37792.2| 362|Caenorhabditis elegans Lethal protein
381 protein.
Length = 362
Score = 58.4 bits (135), Expect = 4e-09
Identities = 25/53 (47%), Positives = 35/53 (66%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PPF+Y LI AI + DK+ TL EIY++ Q F +FR W+N++RHNL
Sbjct: 72 KPPFSYIALIAMAISKRPDKKATLAEIYSYLQENFEFFRGEYAGWRNSIRHNL 124
>L11148-1|AAA28104.1| 237|Caenorhabditis elegans lin-31 protein
protein.
Length = 237
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y +L AI +S DK + L EIY + F ++R+N W+N++RHNL
Sbjct: 13 KPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNL 65
>AF016669-4|AAB66096.1| 237|Caenorhabditis elegans Abnormal cell
lineage protein 31 protein.
Length = 237
Score = 56.8 bits (131), Expect = 1e-08
Identities = 22/53 (41%), Positives = 35/53 (66%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PP++Y +L AI +S DK + L EIY + F ++R+N W+N++RHNL
Sbjct: 13 KPPYSYIWLTYMAIQDSDDKMLPLTEIYKYIMDRFPFYRKNTQRWQNSLRHNL 65
>Z49125-2|CAA88935.1| 333|Caenorhabditis elegans Hypothetical
protein C47G2.2 protein.
Length = 333
Score = 54.4 bits (125), Expect = 7e-08
Identities = 21/58 (36%), Positives = 39/58 (67%)
Frame = +2
Query: 305 KTADVRPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
K++ +PP++Y LI +I+ S +K++TL+EI + + F Y++ W+N++RHNL
Sbjct: 122 KSSHAKPPYSYIALIAMSILNSPEKKLTLSEICEFIINKFEYYKEKFPAWQNSIRHNL 179
>U39848-8|AAA80692.1| 323|Caenorhabditis elegans Forkhead
transcription factor familyprotein 6 protein.
Length = 323
Score = 54.4 bits (125), Expect = 7e-08
Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 4/57 (7%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR----RNAXTWKNAVRHNL 478
+PP++Y LI AI S DK++TLN+IY + ++ F Y+R + W+N++RHNL
Sbjct: 21 KPPYSYVALIAMAIDASPDKRMTLNQIYKFIEAKFPYYRDADAKRKQGWQNSIRHNL 77
>Z81038-11|CAB02761.1| 230|Caenorhabditis elegans Hypothetical
protein C25A1.2 protein.
Length = 230
Score = 54.0 bits (124), Expect = 9e-08
Identities = 21/53 (39%), Positives = 32/53 (60%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+P +Y LI AI+ S K++ L E+Y W + + YFR W+N++RHNL
Sbjct: 78 KPQHSYIGLIAMAILSSPQKKMVLAEVYEWIMNEYPYFRSRGAGWRNSIRHNL 130
>U41268-3|AAA82436.1| 270|Caenorhabditis elegans Forkhead
transcription factor familyprotein 2, isoform a protein.
Length = 270
Score = 53.6 bits (123), Expect = 1e-07
Identities = 22/53 (41%), Positives = 36/53 (67%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
+PPF+Y LI AI +S +K++TL IY + + + ++R N W+N++RHNL
Sbjct: 93 KPPFSYNALIMMAIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNL 145
>Z28377-1|CAA82226.1| 264|Caenorhabditis elegans PES-1A protein
protein.
Length = 264
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-RNAXTWKNAVRHNL 478
RP ++Y LI AI S K + ++EIY + S F Y++ + W+N+VRHNL
Sbjct: 93 RPKYSYNALIAMAIQSSPFKSLRVSEIYKYISSNFSYYKNQKPLQWQNSVRHNL 146
>Z28376-1|CAA82225.1| 228|Caenorhabditis elegans PES-1B protein
protein.
Length = 228
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-RNAXTWKNAVRHNL 478
RP ++Y LI AI S K + ++EIY + S F Y++ + W+N+VRHNL
Sbjct: 57 RPKYSYNALIAMAIQSSPFKSLRVSEIYKYISSNFSYYKNQKPLQWQNSVRHNL 110
>Z28375-1|CAA82224.1| 264|Caenorhabditis elegans PES-1 protein.
Length = 264
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-RNAXTWKNAVRHNL 478
RP ++Y LI AI S K + ++EIY + S F Y++ + W+N+VRHNL
Sbjct: 93 RPKYSYNALIAMAIQSSPFKSLRVSEIYKYISSNFSYYKNQKPLQWQNSVRHNL 146
>U64609-3|AAB04600.1| 264|Caenorhabditis elegans Patterned
expression site protein 1 protein.
Length = 264
Score = 47.2 bits (107), Expect = 1e-05
Identities = 22/54 (40%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-RNAXTWKNAVRHNL 478
RP ++Y LI AI S K + ++EIY + S F Y++ + W+N+VRHNL
Sbjct: 93 RPKYSYNALIAMAIQSSPFKSLRVSEIYKYISSNFSYYKNQKPLQWQNSVRHNL 146
>AF039717-2|AAK82918.1| 508|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform b protein.
Length = 508
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-----RNAXTWKNAVRHNLXXXQML 496
+YA LI AI+ S +K++TL ++Y W YFR ++ WKN++RHNL
Sbjct: 146 SYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSR- 204
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 205 FMRIQNEGA 213
>AF039717-1|AAK82919.1| 510|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform c protein.
Length = 510
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-----RNAXTWKNAVRHNLXXXQML 496
+YA LI AI+ S +K++TL ++Y W YFR ++ WKN++RHNL
Sbjct: 148 SYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSR- 206
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 207 FMRIQNEGA 215
>AF032112-1|AAC47803.1| 510|Caenorhabditis elegans DAF-16 protein.
Length = 510
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-----RNAXTWKNAVRHNLXXXQML 496
+YA LI AI+ S +K++TL ++Y W YFR ++ WKN++RHNL
Sbjct: 148 SYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSR- 206
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 207 FMRIQNEGA 215
>AF020343-1|AAB84391.1| 508|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a2 protein.
Length = 508
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-----RNAXTWKNAVRHNLXXXQML 496
+YA LI AI+ S +K++TL ++Y W YFR ++ WKN++RHNL
Sbjct: 146 SYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSR- 204
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 205 FMRIQNEGA 213
>AF020342-1|AAB84390.1| 510|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16a1 protein.
Length = 510
Score = 47.2 bits (107), Expect = 1e-05
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFR-----RNAXTWKNAVRHNLXXXQML 496
+YA LI AI+ S +K++TL ++Y W YFR ++ WKN++RHNL
Sbjct: 148 SYAELITTAIMASPEKRLTLAQVYEWMVQNVPYFRDKGDSNSSAGWKNSIRHNLSLHSR- 206
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 207 FMRIQNEGA 215
>U40059-3|AAP68936.1| 280|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform b protein.
Length = 280
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRR--NAXTWKNAVRHNL 478
RP +Y LI AI S +K++ LNEIY + Y+R + W+N++RHNL
Sbjct: 46 RPSLSYKDLIIEAIDRSPEKRLKLNEIYQVIRLLHPYYRHRPDQWGWQNSIRHNL 100
>U40059-2|AAA81139.2| 300|Caenorhabditis elegans Forkhead
transcription factor familyprotein 9, isoform a protein.
Length = 300
Score = 42.3 bits (95), Expect = 3e-04
Identities = 22/55 (40%), Positives = 32/55 (58%), Gaps = 2/55 (3%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRR--NAXTWKNAVRHNL 478
RP +Y LI AI S +K++ LNEIY + Y+R + W+N++RHNL
Sbjct: 66 RPSLSYKDLIIEAIDRSPEKRLKLNEIYQVIRLLHPYYRHRPDQWGWQNSIRHNL 120
>AF039717-3|AAK82917.1| 530|Caenorhabditis elegans Abnormal dauer
formation protein16, isoform a protein.
Length = 530
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYF-----RRNAXTWKNAVRHNLXXXQML 496
+Y+ +I A+ + D ++ LNEIY W YF A WKN++RHNL
Sbjct: 168 SYSDIIAKALESAPDGRLKLNEIYQWFSDNIPYFGERSSPEEAAGWKNSIRHNLSLHSR- 226
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 227 FMRIQNEGA 235
>AF020344-1|AAB84392.1| 530|Caenorhabditis elegans fork
head-related transcriptionfactor DAF-16b protein.
Length = 530
Score = 41.9 bits (94), Expect = 4e-04
Identities = 22/69 (31%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
Frame = +2
Query: 332 TYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYF-----RRNAXTWKNAVRHNLXXXQML 496
+Y+ +I A+ + D ++ LNEIY W YF A WKN++RHNL
Sbjct: 168 SYSDIIAKALESAPDGRLKLNEIYQWFSDNIPYFGERSSPEEAAGWKNSIRHNLSLHSR- 226
Query: 497 YARXERKGS 523
+ R + +G+
Sbjct: 227 FMRIQNEGA 235
>U41268-4|AAL02521.1| 168|Caenorhabditis elegans Forkhead
transcription factor familyprotein 2, isoform b protein.
Length = 168
Score = 40.7 bits (91), Expect = 9e-04
Identities = 16/41 (39%), Positives = 28/41 (68%)
Frame = +2
Query: 356 AIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
AI +S +K++TL IY + + + ++R N W+N++RHNL
Sbjct: 3 AIKDSPEKRLTLAGIYEYIVTNYPFYRDNKQGWQNSIRHNL 43
>U27312-11|AAA68254.1| 461|Caenorhabditis elegans Forkhead
transcription factor familyprotein 5 protein.
Length = 461
Score = 39.5 bits (88), Expect = 0.002
Identities = 20/72 (27%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Frame = +2
Query: 281 IQRNREFYKTADV-RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWK 457
+Q+ + K ++ RP +Y L + S D ++ E Y++ + Y+R WK
Sbjct: 158 VQKRFKMVKVRNIQRPQLSYQLLSALTCLNSPDGMISTTENYSFILHHWRYYRYANENWK 217
Query: 458 NAVRHNLXXXQM 493
N+VRH L Q+
Sbjct: 218 NSVRHVLCKCQL 229
>Z92827-7|CAB07324.1| 368|Caenorhabditis elegans Hypothetical
protein C29F7.4 protein.
Length = 368
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
RPP +Y L A + D ++T +Y + + Y+R WKN+VRH L
Sbjct: 65 RPPISYVALCALACRNAPDMKITPAGVYAFILHHWRYYRYANENWKNSVRHQL 117
>Z92827-4|CAB07323.1| 722|Caenorhabditis elegans Hypothetical
protein C29F7.5 protein.
Length = 722
Score = 38.7 bits (86), Expect = 0.004
Identities = 18/53 (33%), Positives = 27/53 (50%)
Frame = +2
Query: 320 RPPFTYAYLIRXAIIESADKQVTLNEIYNWXQSTFCYFRRNAXTWKNAVRHNL 478
RPP +Y L A + D ++T +Y + + Y+R WKN+VRH L
Sbjct: 419 RPPISYVALCALACRNAPDMKITPAGVYAFVLHHWRYYRYANENWKNSVRHQL 471
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,687,745
Number of Sequences: 27780
Number of extensions: 152324
Number of successful extensions: 377
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 340
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 361
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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