Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0046
         (700 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.           25   2.3  
AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine pr...    25   2.3  
AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ chann...    25   3.0  
AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium ch...    25   3.0  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    24   5.3  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    24   5.3  
DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfat...    23   7.0  
AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F rec...    23   7.0  
AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcript...    23   7.0  

>EF519375-1|ABP68484.1|  493|Anopheles gambiae LRIM1 protein.
          Length = 493

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 23/87 (26%), Positives = 35/87 (40%), Gaps = 3/87 (3%)
 Frame = +3

Query: 405 DGTHVXEEGYFTNPNTEEASLVKKGWYSYTGADGKVYTVPLLGRQDWLPC--LXGPFTPL 578
           +G H      F + N    ++ K+     TG + +  TVP+LG      C  L  PF   
Sbjct: 269 NGFHCGTLRDFFSKNQRVQTVAKQTVKKLTGQNEEECTVPMLGHYGPYCCEDLPAPFADR 328

Query: 579 LLPVPAAIQAGLD-QNAXXEXXQAEXE 656
           L+ +     A L  Q +  E  + E E
Sbjct: 329 LIALKRKEHALLSGQGSETERLECERE 355


>AJ276428-1|CAB81934.1| 1322|Anopheles gambiae adhesive serine
           protease protein.
          Length = 1322

 Score = 25.0 bits (52), Expect = 2.3
 Identities = 12/30 (40%), Positives = 17/30 (56%)
 Frame = -2

Query: 543 SLVGPVVARCKLCHQLQCKSTSPFSPGLPL 454
           SLVGP + + +  HQ    S   + PG+PL
Sbjct: 87  SLVGPQLQQQQQQHQQHGPSGPQYQPGVPL 116


>AJ441131-5|CAD29634.1|  574|Anopheles gambiae putative Na+ channel
           protein.
          Length = 574

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 312 DMKACSRWDXRCFEEV 265
           D K CSR + RC+E++
Sbjct: 392 DTKICSRANARCYEQI 407


>AJ439398-4|CAD28127.1|  572|Anopheles gambiae putative sodium
           channel protein.
          Length = 572

 Score = 24.6 bits (51), Expect = 3.0
 Identities = 8/16 (50%), Positives = 12/16 (75%)
 Frame = -2

Query: 312 DMKACSRWDXRCFEEV 265
           D K CSR + RC+E++
Sbjct: 392 DTKICSRANARCYEQI 407


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 206 LSPKQLRPPSKLILSSEYLCT 268
           L  + L+PPS++ILS+ +L T
Sbjct: 321 LEHEGLKPPSQIILSTIFLVT 341


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 23.8 bits (49), Expect = 5.3
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +2

Query: 206 LSPKQLRPPSKLILSSEYLCT 268
           L  + L+PPS++ILS+ +L T
Sbjct: 321 LEHEGLKPPSQIILSTIFLVT 341


>DQ230893-2|ABD94312.1|  525|Anopheles gambiae iduronate 2-sulfatase
           precursor protein.
          Length = 525

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 12/32 (37%), Positives = 15/32 (46%)
 Frame = +2

Query: 134 EPAYPVETSKYVERSTQADPADKHLSPKQLRP 229
           EPA+   T +Y   +   DPAD  L    L P
Sbjct: 150 EPAFHPLTDEYSNAAVCIDPADGRLKRNLLCP 181


>AY579078-1|AAT81602.1|  425|Anopheles gambiae neuropeptide F
           receptor protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 7/24 (29%), Positives = 15/24 (62%)
 Frame = -3

Query: 410 SIXDLILVFVTAIITIIHFILDHW 339
           ++ DL+L  VT  +T++  +  +W
Sbjct: 84  AVSDLLLCLVTMPLTLVEILTKYW 107


>AB090824-2|BAC57924.1| 1248|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1248

 Score = 23.4 bits (48), Expect = 7.0
 Identities = 10/23 (43%), Positives = 13/23 (56%)
 Frame = +2

Query: 386 IRVSNRRWNTRXRGRLLHESQYR 454
           +R++  RWNTR     L ES  R
Sbjct: 232 VRLAGTRWNTRQFDPTLFESALR 254


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 688,308
Number of Sequences: 2352
Number of extensions: 14787
Number of successful extensions: 38
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 38
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 71086350
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)