Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0046
(700 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical pr... 31 1.0
U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical pr... 31 1.0
AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical ... 30 1.4
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 30 1.8
AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical ... 30 1.8
Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical pr... 29 3.2
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.2
Z77663-5|CAB01215.1| 365|Caenorhabditis elegans Hypothetical pr... 29 4.2
Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical pr... 28 5.6
AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase ... 28 5.6
Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical p... 28 7.4
Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical pr... 28 7.4
U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical p... 28 7.4
AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein. 28 7.4
AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical ... 28 7.4
AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical ... 28 7.4
Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical pr... 27 9.8
Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical pr... 27 9.8
U67953-6|ABA00176.1| 287|Caenorhabditis elegans Hypothetical pr... 27 9.8
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 27 9.8
AF067947-4|AAC19230.1| 300|Caenorhabditis elegans Hypothetical ... 27 9.8
AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical ... 27 9.8
>Z70756-9|CAA94797.1| 275|Caenorhabditis elegans Hypothetical
protein T06E4.11 protein.
Length = 275
Score = 30.7 bits (66), Expect = 1.0
Identities = 18/47 (38%), Positives = 20/47 (42%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQN 278
PP Q KPQ Q YPQ+ AP YPQ PPQ+
Sbjct: 30 PPSQQKPQGYTQGYQDSAQVPQGYPQSQQAPQAPQGYPQQ---PPQD 73
>U80439-8|AAB37646.3| 1724|Caenorhabditis elegans Hypothetical
protein C01G8.9a protein.
Length = 1724
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/40 (32%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Frame = +3
Query: 156 PQNTWNAPPKPIQPIN-TYPQNNYAPPQNSYYPQNTYAPP 272
PQ + P + P + + P N++APP ++PQ+ PP
Sbjct: 53 PQQPYEHPAQQHPPQHHSVPPNSFAPPPGQHHPQHPGMPP 92
>AL031635-5|CAA21042.1| 1113|Caenorhabditis elegans Hypothetical
protein Y47D3B.7 protein.
Length = 1113
Score = 30.3 bits (65), Expect = 1.4
Identities = 11/35 (31%), Positives = 18/35 (51%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY 245
P+ + ++ W P QP + P N ++PPQ Y
Sbjct: 33 PLDFDMEHNWQEPGPSQQPDPSIPGNQHSPPQEYY 67
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.9 bits (64), Expect = 1.8
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQP-INTY-PQNNYAPPQNSYYPQNTYAPP 272
PP P NAPP P P IN + P PP P +T APP
Sbjct: 475 PPSSLLPLINTNAPPPPPMPSINGHAPNPPPPPPLLGIAPMSTNAPP 521
>AF125971-9|AAD14764.1| 442|Caenorhabditis elegans Hypothetical
protein Y4C6B.1 protein.
Length = 442
Score = 29.9 bits (64), Expect = 1.8
Identities = 17/54 (31%), Positives = 28/54 (51%)
Frame = +2
Query: 137 PAYPVETSKYVERSTQADPADKHLSPKQLRPPSKLILSSEYLCTSSKHLXSHLE 298
P +++ + T + PA+K SPK L PP++ I+S+ T H S L+
Sbjct: 331 PLSEIKSDNKLSTVTPSKPAEKKSSPKSL-PPAETIVSNRPYLTDIAHGRSMLK 383
>Z78411-2|CAB01646.1| 285|Caenorhabditis elegans Hypothetical
protein F02D8.2 protein.
Length = 285
Score = 29.1 bits (62), Expect = 3.2
Identities = 19/50 (38%), Positives = 24/50 (48%), Gaps = 10/50 (20%)
Frame = +3
Query: 156 PQNTWN-APPKPIQPINTYPQN--NYAPPQNSY-------YPQNTYAPPQ 275
PQ +N P P P N+Y NYA P N+Y P N+YA P+
Sbjct: 55 PQQRFNYGLPPPTPPANSYATAPANYAAPSNAYPFAPQYSIPMNSYAMPK 104
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.1 bits (62), Expect = 3.2
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNY-APPQNSYY---PQNTYAPP 272
PP Q PQ + APP+ P PQ ++ APP ++ PQ+ PP
Sbjct: 321 PPPQGAPQQGFGAPPQG-PPQGGPPQGSFGAPPPQQFHAPSPQSFGGPP 368
>Z77663-5|CAB01215.1| 365|Caenorhabditis elegans Hypothetical
protein F53F4.6 protein.
Length = 365
Score = 28.7 bits (61), Expect = 4.2
Identities = 9/27 (33%), Positives = 18/27 (66%)
Frame = +3
Query: 171 NAPPKPIQPINTYPQNNYAPPQNSYYP 251
N+PP+ P++ +P N Y+ +S++P
Sbjct: 102 NSPPQSPTPLHHFPVNQYSSASSSHHP 128
>Z49127-2|CAA88949.1| 245|Caenorhabditis elegans Hypothetical
protein F13D12.3 protein.
Length = 245
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/21 (52%), Positives = 17/21 (80%), Gaps = 1/21 (4%)
Frame = +3
Query: 210 PQNNYAPPQNSY-YPQNTYAP 269
PQ +Y+PP++SY P+ TY+P
Sbjct: 87 PQPSYSPPKSSYGRPEPTYSP 107
>AF229855-1|AAF71303.1| 1497|Caenorhabditis elegans dual oxidase
protein.
Length = 1497
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/37 (37%), Positives = 23/37 (62%)
Frame = -2
Query: 345 SLGRELL*SKSDMKACSRWDXRCFEEVHRYSEDSMSF 235
++ RE L S MKA + + R F + +++EDS+SF
Sbjct: 803 TISREELASAMGMKANNEFVKRMFAMIAKHNEDSLSF 839
>Z81054-12|CAB61006.1| 1781|Caenorhabditis elegans Hypothetical
protein C02F4.1 protein.
Length = 1781
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 177 PPKPIQPINTYPQNNY 224
PP PI PIN P +NY
Sbjct: 1721 PPNPISPINRGPSSNY 1736
>Z81032-6|CAB60991.1| 1781|Caenorhabditis elegans Hypothetical protein
C02F4.1 protein.
Length = 1781
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 177 PPKPIQPINTYPQNNY 224
PP PI PIN P +NY
Sbjct: 1721 PPNPISPINRGPSSNY 1736
>U39678-12|AAK39209.2| 1185|Caenorhabditis elegans Hypothetical
protein C39D10.7 protein.
Length = 1185
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/33 (36%), Positives = 19/33 (57%), Gaps = 2/33 (6%)
Frame = +3
Query: 186 PIQPINTYPQNN--YAPPQNSYYPQNTYAPPQN 278
P+ P P + Y+PP+ +Y P++T A P N
Sbjct: 285 PVDPTPYAPASAPVYSPPRTTYVPRSTSAAPPN 317
>AF038576-1|AAC38973.1| 1781|Caenorhabditis elegans CED-5 protein.
Length = 1781
Score = 27.9 bits (59), Expect = 7.4
Identities = 10/16 (62%), Positives = 11/16 (68%)
Frame = +3
Query: 177 PPKPIQPINTYPQNNY 224
PP PI PIN P +NY
Sbjct: 1721 PPNPISPINRGPSSNY 1736
>AC084152-9|AAK39313.1| 296|Caenorhabditis elegans Hypothetical
protein Y102A11A.1 protein.
Length = 296
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = +3
Query: 171 NAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQ 275
NAP P+QPI N PP PQ PPQ
Sbjct: 171 NAPVPPVQPIFNI---NSGPPAAQPAPQQIMIPPQ 202
>AC024821-2|AAP86610.1| 588|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2b protein.
Length = 588
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 616 SRPA*IAAGTGRRSGVNG 563
SRPA +A+ G RSGVNG
Sbjct: 459 SRPASVASSIGARSGVNG 476
>AC024821-1|AAK68901.2| 456|Caenorhabditis elegans Hypothetical
protein Y55B1AR.2a protein.
Length = 456
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/18 (66%), Positives = 14/18 (77%)
Frame = -1
Query: 616 SRPA*IAAGTGRRSGVNG 563
SRPA +A+ G RSGVNG
Sbjct: 305 SRPASVASSIGARSGVNG 322
>Z66565-6|CAA91483.1| 165|Caenorhabditis elegans Hypothetical
protein T04F8.8 protein.
Length = 165
Score = 27.5 bits (58), Expect = 9.8
Identities = 16/36 (44%), Positives = 20/36 (55%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY 245
P Q +PQ + P P +PI P N+YA P NSY
Sbjct: 126 PEPQPEPQPEPHPEPAP-EPI-VKPYNSYAQPHNSY 159
>Z46791-5|CAA86755.2| 948|Caenorhabditis elegans Hypothetical
protein C09G5.6 protein.
Length = 948
Score = 27.5 bits (58), Expect = 9.8
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +3
Query: 168 WNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQN 278
+N P P T P+ Y PPQ +Y Q TY P N
Sbjct: 196 YNPQPPPKTGYPTNPRVPYNPPQPNYTRQPTY-PEDN 231
>U67953-6|ABA00176.1| 287|Caenorhabditis elegans Hypothetical
protein ZC13.10 protein.
Length = 287
Score = 27.5 bits (58), Expect = 9.8
Identities = 22/75 (29%), Positives = 29/75 (38%), Gaps = 13/75 (17%)
Frame = -3
Query: 524 WHGVNFAISSSVRV----PALFHQACLFCIGIR---------EVAFLAYVCSIXDLILVF 384
W + ++ S RV P H+ CL CI +R E+ L Y I F
Sbjct: 90 WSSIRLSVLSLSRVFFLKPCSKHKCCLGCISLRDAIPLICTVEIFALGYGAQIALSYFAF 149
Query: 383 VTAIITIIHFILDHW 339
+ I II F L W
Sbjct: 150 LFLSIAIILFTLSMW 164
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNY---APPQNSYYPQNTYAPP 272
PP PQ+ A P P P+ +YPQN APP + YPQ+ P
Sbjct: 67 PPPAPYPQH---AVPAPAPPLASYPQNAVPVPAPPP-APYPQHAVPAP 110
Score = 27.5 bits (58), Expect = 9.8
Identities = 19/47 (40%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNY-AP-PQNSYYPQNTYAPP 272
PP+ PQ NA P P P YPQ+ AP P + YPQ+ P
Sbjct: 82 PPLASYPQ---NAVPVPAPPPAPYPQHAVPAPAPPPAPYPQHAVPAP 125
>AF067947-4|AAC19230.1| 300|Caenorhabditis elegans Hypothetical
protein T10B5.7 protein.
Length = 300
Score = 27.5 bits (58), Expect = 9.8
Identities = 12/22 (54%), Positives = 14/22 (63%)
Frame = -2
Query: 273 EEVHRYSEDSMSFEGGRNCFGD 208
E+ HRY +SF G RNC GD
Sbjct: 276 EDHHRYFGMFISFYGRRNCTGD 297
>AC103567-4|AAL35731.2| 598|Caenorhabditis elegans Hypothetical
protein Y51F10.4 protein.
Length = 598
Score = 27.5 bits (58), Expect = 9.8
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -3
Query: 509 FAISSSVRVPALFHQA--CLFCIGIREVAFLAYVCSIXDLILVFVTAIITIIHFIL 348
F +S +V +P + A LFC+ +R+ + + + +TA+I + + IL
Sbjct: 320 FLLSIAVSIPLMMFPARTALFCLILRDKESITHTVDLEKFTFHILTAVILLFNTIL 375
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,904,294
Number of Sequences: 27780
Number of extensions: 331247
Number of successful extensions: 1202
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 1063
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1188
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1613473434
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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