Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0046
(700 letters)
Database: arabidopsis
28,952 sequences; 12,070,560 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
At5g59170.1 68418.m07416 proline-rich family protein contains pr... 36 0.020
At1g22080.1 68414.m02761 hypothetical protein 35 0.060
At4g34150.1 68417.m04846 C2 domain-containing protein similar to... 34 0.079
At3g49840.1 68416.m05449 proline-rich family protein contains pr... 34 0.079
At1g12040.1 68414.m01390 leucine-rich repeat family protein / ex... 34 0.079
At2g27380.1 68415.m03302 proline-rich family protein contains pr... 34 0.10
At1g62440.1 68414.m07044 leucine-rich repeat family protein / ex... 33 0.14
At5g26080.1 68418.m03103 proline-rich family protein contains pr... 32 0.32
At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family... 32 0.42
At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family... 32 0.42
At1g47210.2 68414.m05226 cyclin family protein similar to A-type... 31 0.56
At4g33970.1 68417.m04820 leucine-rich repeat family protein / ex... 31 0.97
At5g67600.1 68418.m08524 expressed protein 30 1.3
At5g45350.1 68418.m05567 proline-rich family protein contains pr... 30 1.7
At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1) (P... 29 2.2
At1g76930.2 68414.m08956 proline-rich extensin-like family prote... 29 2.2
At1g76930.1 68414.m08955 proline-rich extensin-like family prote... 29 2.2
At5g19810.1 68418.m02354 proline-rich extensin-like family prote... 29 3.0
At3g24550.1 68416.m03083 protein kinase family protein contains ... 29 3.0
At3g59690.1 68416.m06660 calmodulin-binding family protein simil... 29 3.9
At1g49490.1 68414.m05547 leucine-rich repeat family protein / ex... 29 3.9
At1g31750.1 68414.m03895 proline-rich family protein contains pr... 29 3.9
At1g09070.1 68414.m01012 C2 domain-containing protein / src2-lik... 29 3.9
At3g59710.1 68416.m06662 short-chain dehydrogenase/reductase (SD... 28 5.2
At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family... 28 6.8
At1g21670.1 68414.m02712 expressed protein similar to TolB prote... 28 6.8
At4g14070.1 68417.m02172 AMP-binding protein, putative similar t... 27 9.0
At2g41420.1 68415.m05111 proline-rich family protein contains pr... 27 9.0
At1g54970.1 68414.m06278 proline-rich family protein similar to ... 27 9.0
At1g54170.1 68414.m06175 ataxin-2-related similar to SCA2 (GI:17... 27 9.0
>At5g59170.1 68418.m07416 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 288
Score = 36.3 bits (80), Expect = 0.020
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQP-INTYPQ-NNYAPPQNSYYPQNTYAPP 272
PP Q+ P PP+ P I YP +Y PP Y PQ Y PP
Sbjct: 129 PPEQYSPPFKKYPPPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYPPP 175
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/46 (41%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQN-NYAPPQNSYYPQNTYAPP 272
PP +W P+ ++ PPKP PI YP Y PP Y P PP
Sbjct: 41 PPFKWGPKFPYS-PPKP-PPIEKYPPPVQYPPPIKKYPPPPYEHPP 84
Score = 35.1 bits (77), Expect = 0.045
Identities = 19/47 (40%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQP-INTYP-QNNYAPPQNSYYPQNTYAPP 272
PP Q+ P PP+ P I YP Q Y PP Y P Y PP
Sbjct: 142 PPEQYPPPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKYPPPEKYPPP 188
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/47 (38%), Positives = 21/47 (44%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQP-INTY-PQNNYAPPQNSYYPQNTYAPP 272
PP Q+ P PP+ P I Y P Y+PP Y P Y PP
Sbjct: 103 PPEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPP 149
Score = 33.1 bits (72), Expect = 0.18
Identities = 19/49 (38%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPP-KPIQPINTYPQN--NYAPPQNSYYPQNTYAPPQ 275
PPI+ P + PP K PI TYP Y PP+ P Y PP+
Sbjct: 70 PPIKKYPPPPYEHPPVKYPPPIKTYPHPPVKYPPPEQYPPPIKKYPPPE 118
Score = 33.1 bits (72), Expect = 0.18
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPPQ 275
PP+++ P + P K P YP Y PP+ P Y PP+
Sbjct: 97 PPVKYPPPEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPPFKKYPPPE 144
Score = 32.7 bits (71), Expect = 0.24
Identities = 20/49 (40%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQ---PINTYPQ-NNYAPPQNSYYPQNTYAPP 272
PPI+ P PP P Q PI YP Y PP Y P Y+PP
Sbjct: 89 PPIKTYPHPPVKYPP-PEQYPPPIKKYPPPEQYPPPIKKYPPPEQYSPP 136
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/48 (35%), Positives = 20/48 (41%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPP 272
PPI+ + P + P K P YP Y PP Y P Y PP
Sbjct: 174 PPIKKYPPPEKYPPPIKKYPPPEQYPPPIKKYPPPIKKYPPPEEYPPP 221
Score = 29.9 bits (64), Expect = 1.7
Identities = 19/47 (40%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYPQ-NNYAPPQNSYYPQNTYAPP 272
PPI+ + PQ + PP PI YP Y PP Y P Y PP
Sbjct: 161 PPIKKYPPQEQY--PP----PIKKYPPPEKYPPPIKKYPPPEQYPPP 201
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQP-INTYPQNNYAPPQNSYYPQNTYAPP 272
PP Q+ P PP+ P YP PP YP + PP
Sbjct: 116 PPEQYPPPIKKYPPPEQYSPPFKKYPPPEQYPPPIKKYPPPEHYPP 161
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/49 (32%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPPQ 275
PPI+ + P + P K P YP Y PP+ P Y PP+
Sbjct: 148 PPIKKYPPPEHYPPPIKKYPPQEQYPPPIKKYPPPEKYPPPIKKYPPPE 196
>At1g22080.1 68414.m02761 hypothetical protein
Length = 475
Score = 34.7 bits (76), Expect = 0.060
Identities = 16/64 (25%), Positives = 33/64 (51%)
Frame = +1
Query: 388 TSIKSXMEHTXARKATSRIPIQKRQAW*KRAGTLTLELMAKFTPCHYWADKTGYHAYXDH 567
+ + S MEH+ AR + +++P W + T+ L+A+ PC + K G+ + +
Sbjct: 408 SDVASKMEHSDARYSVTKVPTSMDTLWAQVIATMPYHLVAQAVPCQS-SSKPGHGYFLVY 466
Query: 568 LPHS 579
+ +S
Sbjct: 467 MKYS 470
>At4g34150.1 68417.m04846 C2 domain-containing protein similar to
calcium-dependent protein kinase [Dunaliella
tertiolecta] GI:6644464; contains Pfam profile PF00168:
C2 domain
Length = 247
Score = 34.3 bits (75), Expect = 0.079
Identities = 19/46 (41%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Frame = +3
Query: 141 PIQWKPQNTWNAPP-----KPIQPINTYPQNNYAPPQNSYYPQNTY 263
P + P +T PP P P + YP Y PPQ SYYPQ Y
Sbjct: 194 PSAYPPPSTSGYPPIPSAYPPPPPSSAYPPQPY-PPQPSYYPQGPY 238
>At3g49840.1 68416.m05449 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 606
Score = 34.3 bits (75), Expect = 0.079
Identities = 20/52 (38%), Positives = 22/52 (42%), Gaps = 6/52 (11%)
Frame = +3
Query: 138 PPIQWKPQNTWNAP---PKPIQPINTYPQNNYAPPQNSY---YPQNTYAPPQ 275
PP + P + P P P P YP Y PPQ Y YP Y PPQ
Sbjct: 501 PPKEGYPPAGYPPPAGYPPPQYPQAGYPPAGYPPPQQGYGQGYPAQGYPPPQ 552
>At1g12040.1 68414.m01390 leucine-rich repeat family protein /
extensin family protein (LRX1) similar to extensin-like
protein [Lycopersicon esculentum]
gi|5917664|gb|AAD55979; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 744
Score = 34.3 bits (75), Expect = 0.079
Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 272
P+ + P PP P+ YP Y+PP S YYPQ T +PP
Sbjct: 572 PVYYPPVTNSPPPPSPVY----YPPVTYSPPPPSPVYYPQVTPSPP 613
Score = 32.7 bits (71), Expect = 0.24
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQ--NNYAPPQNSYYPQNTYAPP 272
P+ + P PP P+ YP N+ PP YYP TY+PP
Sbjct: 557 PVYYPPVTQSPPPPSPVY----YPPVTNSPPPPSPVYYPPVTYSPP 598
Score = 29.9 bits (64), Expect = 1.7
Identities = 16/46 (34%), Positives = 21/46 (45%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 272
P+ + P PP P+ YP +PP S YYP T +PP
Sbjct: 632 PVYYPPVTPSPPPPSPVY----YPPVTPSPPPPSPVYYPSETQSPP 673
Score = 29.5 bits (63), Expect = 2.2
Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 272
P+ + P PP P+ YPQ +PP S YYP T +PP
Sbjct: 587 PVYYPPVTYSPPPPSPVY----YPQVTPSPPPPSPLYYPPVTPSPP 628
>At2g27380.1 68415.m03302 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 761
Score = 33.9 bits (74), Expect = 0.10
Identities = 19/48 (39%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS---YYPQNTYAPP 272
PP+Q P T++ P KP PI P Y+PP P TY+PP
Sbjct: 489 PPVQKPPTPTYSPPVKP-PPIQKPPTPTYSPPIKPPPVKPPTPTYSPP 535
Score = 33.9 bits (74), Expect = 0.10
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+Q P T++ P KP P+ P Y+PP P TY+PP
Sbjct: 658 PPVQKPPTPTYSPPVKP-PPVQLPPTPTYSPPVKPPPVQVPPTPTYSPP 705
Score = 33.5 bits (73), Expect = 0.14
Identities = 22/76 (28%), Positives = 28/76 (36%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
P S PIK +QKP Y PP+Q P T++ P K
Sbjct: 649 PTYSPPIKPPPVQKPPTP-TYSPPVKPPPVQLPPTPTYSPPVKPPPVQVPPTPTYSPPVK 707
Query: 186 PIQPINTYPQNNYAPP 233
P P+ P Y+PP
Sbjct: 708 P-PPVQVPPTPTYSPP 722
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/48 (35%), Positives = 24/48 (50%), Gaps = 3/48 (6%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY---PQNTYAPP 272
PP+Q P T++ P KP P++ P Y+PP P Y+PP
Sbjct: 153 PPVQMPPTPTYSPPIKP-PPVHKPPTPTYSPPIKPPVHKPPTPIYSPP 199
Score = 32.3 bits (70), Expect = 0.32
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
PI S PIK + KP Y PP+ P ++ P K
Sbjct: 211 PIYSPPIKPPPVHKPPTP-TYSPPVKPPPVHKPPTPIYSPPIKPPPVHKPPTPIYSPPVK 269
Query: 186 PIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
P P+ T P Y+PP P TY+PP
Sbjct: 270 P-PPVQTPPTPIYSPPVKPPPVHKPPTPTYSPP 301
Score = 31.9 bits (69), Expect = 0.42
Identities = 28/89 (31%), Positives = 31/89 (34%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
PI S PI IQKP Y PPIQ P T++ P
Sbjct: 61 PIYSPPIYPPPIQKPPT---YSPPIYPPPIQKPPTPTYSPPIYPPPIQKPPTPTYSPPIY 117
Query: 186 PIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
P PI P Y+PP YP PP
Sbjct: 118 P-PPIQKPPTPTYSPP---IYPPPIQKPP 142
Score = 31.9 bits (69), Expect = 0.42
Identities = 19/49 (38%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PPIQ P T++ P P PI P +Y+PP P TY+PP
Sbjct: 119 PPIQKPPTPTYSPPIYP-PPIQKPPTPSYSPPVKPPPVQMPPTPTYSPP 166
Score = 31.9 bits (69), Expect = 0.42
Identities = 25/93 (26%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
PI S PIK + KP +Y PP+ P T++ PP
Sbjct: 245 PIYSPPIKPPPVHKPPTP-IYSPPVKPPPVQTPPTPIYSPPVKPPPVHKPPTPTYS-PPV 302
Query: 186 PIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
P+ P Y+PP P TY+PP
Sbjct: 303 KSPPVQKPPTPTYSPPIKPPPVQKPPTPTYSPP 335
Score = 31.5 bits (68), Expect = 0.56
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P T++ P KP P+ P Y+PP P TY+PP
Sbjct: 641 PPVHKPPTPTYSPPIKP-PPVQKPPTPTYSPPVKPPPVQLPPTPTYSPP 688
Score = 31.1 bits (67), Expect = 0.73
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P T++ P KP PI+ P Y+PP P TY+PP
Sbjct: 539 PPVHKPPTPTYSPPIKP-PPIHKPPTPTYSPPIKPPPVHKPPTPTYSPP 586
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P T++ P KP P++ P Y+PP P TY+PP
Sbjct: 573 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPPIKPPPVHKPPTPTYSPP 620
Score = 30.7 bits (66), Expect = 0.97
Identities = 17/49 (34%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P T++ P KP P++ P Y+PP P TY+PP
Sbjct: 607 PPVHKPPTPTYSPPIKP-PPVHKPPTPTYSPPIKPPPVHKPPTPTYSPP 654
Score = 30.3 bits (65), Expect = 1.3
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
PI S P+K + KP +Y PP++ P T++ P +
Sbjct: 430 PIYSPPVKPPPVHKPPTP-IYSPPVKPPPVHKPPTPTYSPPIKPPPVK-PPTPTYSPPVQ 487
Query: 186 PIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
P P+ P Y+PP P TY+PP
Sbjct: 488 P-PPVQKPPTPTYSPPVKPPPIQKPPTPTYSPP 519
Score = 29.5 bits (63), Expect = 2.2
Identities = 26/93 (27%), Positives = 33/93 (35%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
PI S P+K IQKP Y PP+ KP +PP
Sbjct: 380 PIYSPPVKPPPIQKPPT-PTYSPPIKPPPLQKPPTPTYSPPIKLPPV--KPPTPIYSPPV 436
Query: 186 PIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
P++ P Y+PP P TY+PP
Sbjct: 437 KPPPVHKPPTPIYSPPVKPPPVHKPPTPTYSPP 469
Score = 29.1 bits (62), Expect = 3.0
Identities = 17/49 (34%), Positives = 22/49 (44%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P ++ P KP PI P Y+PP P TY+PP
Sbjct: 372 PPVHKPPTPIYSPPVKP-PPIQKPPTPTYSPPIKPPPLQKPPTPTYSPP 419
Score = 28.3 bits (60), Expect = 5.2
Identities = 16/49 (32%), Positives = 23/49 (46%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
PP+ P ++ P KP P++ P Y+PP P TY+PP
Sbjct: 355 PPVHKPPTPIYSPPVKP-PPVHKPPTPIYSPPVKPPPIQKPPTPTYSPP 402
Score = 28.3 bits (60), Expect = 5.2
Identities = 24/93 (25%), Positives = 35/93 (37%), Gaps = 4/93 (4%)
Frame = +3
Query: 6 PIMSNPIKKSKIQKPRNLLVY*AKAXXXXXXXXXXXXXXXXXXXPPIQWKPQNTWNAPPK 185
P S P++ +QKP Y PP++ P T++ P K
Sbjct: 480 PTYSPPVQPPPVQKPPTP-TYSPPVKPPPIQKPPTPTYSPPIKPPPVK-PPTPTYSPPIK 537
Query: 186 PIQPINTYPQNNYAPPQN----SYYPQNTYAPP 272
P P++ P Y+PP P TY+PP
Sbjct: 538 P-PPVHKPPTPTYSPPIKPPPIHKPPTPTYSPP 569
>At1g62440.1 68414.m07044 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 826
Score = 33.5 bits (73), Expect = 0.14
Identities = 17/45 (37%), Positives = 22/45 (48%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
PP+ + P T + PP P P+ P PP YYP T +PP
Sbjct: 664 PPVYYSPV-TQSPPPPP--PVYYPPVTQSPPPSPVYYPPVTQSPP 705
Score = 30.3 bits (65), Expect = 1.3
Identities = 17/47 (36%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNS--YYPQNTYAPP 272
PP+ + P PP P+ YP +PP S YYP T +PP
Sbjct: 707 PPVYYLPVTQSPPPPSPVY----YPPVAKSPPPPSPVYYPPVTQSPP 749
>At5g26080.1 68418.m03103 proline-rich family protein contains
proline-rich extensin domains, INTERPRO:IPR002965
Length = 141
Score = 32.3 bits (70), Expect = 0.32
Identities = 17/44 (38%), Positives = 22/44 (50%)
Frame = +3
Query: 141 PIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
P+ + P +PP P PI YP Y+PP YP Y+PP
Sbjct: 63 PVAFPPPPPIYSPPPP--PI--YPPPIYSPPPPPIYPPPIYSPP 102
>At4g23470.2 68417.m03383 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 199
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY--YPQNTYAPP 272
PP Q P + + P P + YPQN PP ++Y YP Y PP
Sbjct: 151 PPQQGYPPSGYPQHPPQGYPPSGYPQN---PPPSAYSQYPPGAYPPP 194
>At4g23470.1 68417.m03382 hydroxyproline-rich glycoprotein family
protein contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 255
Score = 31.9 bits (69), Expect = 0.42
Identities = 18/47 (38%), Positives = 23/47 (48%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY--YPQNTYAPP 272
PP Q P + + P P + YPQN PP ++Y YP Y PP
Sbjct: 207 PPQQGYPPSGYPQHPPQGYPPSGYPQN---PPPSAYSQYPPGAYPPP 250
>At1g47210.2 68414.m05226 cyclin family protein similar to A-type
cyclin [Catharanthus roseus] GI:2190259; contains Pfam
profile PF00134: Cyclin, N-terminal domain
Length = 372
Score = 31.5 bits (68), Expect = 0.56
Identities = 10/21 (47%), Positives = 15/21 (71%)
Frame = -2
Query: 504 HQLQCKSTSPFSPGLPLLYWD 442
H+ QC +T P SP LP+ +W+
Sbjct: 348 HKFQCVATMPVSPELPVTFWE 368
>At4g33970.1 68417.m04820 leucine-rich repeat family protein /
extensin family protein similar to extensin-like protein
[Lycopersicon esculentum] gi|5917664|gb|AAD55979;
contains leucine-rich repeats, Pfam:PF00560; contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 699
Score = 30.7 bits (66), Expect = 0.97
Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTYAPP 272
PP+ P +PP P P+++ P ++PP Y P ++PP
Sbjct: 545 PPVHSPPPPPVYSPPPPPPPVHSPPPPVFSPPPPVYSPPPPVHSPP 590
>At5g67600.1 68418.m08524 expressed protein
Length = 82
Score = 30.3 bits (65), Expect = 1.3
Identities = 15/34 (44%), Positives = 16/34 (47%), Gaps = 1/34 (2%)
Frame = +3
Query: 177 PPKPIQPINTYPQNNYAPPQNSY-YPQNTYAPPQ 275
PPK P YP Y PP + YP Y PPQ
Sbjct: 18 PPKDGYPPAGYPPAGYPPPGYAQGYPAQGYPPPQ 51
>At5g45350.1 68418.m05567 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 177
Score = 29.9 bits (64), Expect = 1.7
Identities = 14/35 (40%), Positives = 15/35 (42%), Gaps = 4/35 (11%)
Frame = +3
Query: 177 PPKPIQPINTYPQNNYAPPQNSY----YPQNTYAP 269
PP P YPQ Y PP +Y YP Y P
Sbjct: 22 PPPGAYPPAGYPQQGYPPPPGAYPPAGYPPGAYPP 56
>At4g31300.1 68417.m04441 20S proteasome beta subunit A (PBA1)
(PRCD) identical to cDNA proteasome subunit prcd
GI:2511593
Length = 233
Score = 29.5 bits (63), Expect = 2.2
Identities = 13/33 (39%), Positives = 18/33 (54%)
Frame = +3
Query: 435 FTNPNTEEASLVKKGWYSYTGADGKVYTVPLLG 533
+ N N + L+ GW Y G GK+Y +PL G
Sbjct: 100 YNNKNMLQTGLIVGGWDKYEG--GKIYGIPLGG 130
>At1g76930.2 68414.m08956 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 256
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTYAPP 272
PP++ + P + +PP P++ + P PP YY P Y P
Sbjct: 48 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSP 94
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQW-KPQNTWNAPPKPIQPINTYPQNNYAPP---QNSYYPQNTYAPP 272
PP+++ P + +PP P+ P +Y+PP ++ P Y+PP
Sbjct: 80 PPVKYYSPPPVYKSPPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPP 128
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYP-QNNYAPPQNSYYPQNTYAPP 272
PP++ + P + +PP P++ + P + PP Y P Y P
Sbjct: 32 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSP 78
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYP-QNNYAPPQNSYYPQNTYAPP 272
PP++ + P + +PP P++ + P + PP Y P Y P
Sbjct: 104 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSP 150
>At1g76930.1 68414.m08955 proline-rich extensin-like family protein
contains extensin-like region, Pfam:PF04554
Length = 293
Score = 29.5 bits (63), Expect = 2.2
Identities = 14/47 (29%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYY-PQNTYAPP 272
PP++ + P + +PP P++ + P PP YY P Y P
Sbjct: 48 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKYYSPPPVYKSP 94
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/49 (28%), Positives = 25/49 (51%), Gaps = 4/49 (8%)
Frame = +3
Query: 138 PPIQW-KPQNTWNAPPKPIQPINTYPQNNYAPP---QNSYYPQNTYAPP 272
PP+++ P + +PP P+ P +Y+PP ++ P Y+PP
Sbjct: 80 PPVKYYSPPPVYKSPPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPP 128
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYP-QNNYAPPQNSYYPQNTYAPP 272
PP++ + P + +PP P++ + P + PP Y P Y P
Sbjct: 32 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSP 78
Score = 27.5 bits (58), Expect = 9.0
Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 2/47 (4%)
Frame = +3
Query: 138 PPIQ-WKPQNTWNAPPKPIQPINTYP-QNNYAPPQNSYYPQNTYAPP 272
PP++ + P + +PP P++ + P + PP Y P Y P
Sbjct: 104 PPVKHYSPPPVYKSPPPPVKHYSPPPVYKSPPPPVKHYSPPPVYKSP 150
>At5g19810.1 68418.m02354 proline-rich extensin-like family protein
contains proline-rich extensin domains,
INTERPRO:IPR002965
Length = 249
Score = 29.1 bits (62), Expect = 3.0
Identities = 14/45 (31%), Positives = 21/45 (46%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
PP +K + PP P Q +Y ++ PP + Y Y+PP
Sbjct: 195 PPPPYKYGRVYPPPPPPPQAARSYKRSPPPPPPSKY--GRVYSPP 237
>At3g24550.1 68416.m03083 protein kinase family protein contains
Pfam domain PF00069: Protein kinase domain
Length = 652
Score = 29.1 bits (62), Expect = 3.0
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNT 260
PP+ PQ + +AP P P T P N +PP + P NT
Sbjct: 75 PPL---PQPSPSAPITPSPPSPTTPSNPRSPPSPNQGPPNT 112
>At3g59690.1 68416.m06660 calmodulin-binding family protein similar
to SF16 protein [Helianthus annuus] GI:560150; contains
Pfam profile PF00612: IQ calmodulin-binding motif
Length = 517
Score = 28.7 bits (61), Expect = 3.9
Identities = 13/40 (32%), Positives = 18/40 (45%)
Frame = +3
Query: 156 PQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQ 275
P + + PKPI P YPQ +Y P + P P+
Sbjct: 111 PSQRYVSSPKPISPRVAYPQVHYPKPPSPKPPSPRAVSPR 150
>At1g49490.1 68414.m05547 leucine-rich repeat family protein /
extensin family protein contains similarity to disease
resistance protein GI:3894383 from [Lycopersicon
esculentum]; contains leucine-rich repeats,
Pfam:PF00560; contains proline rich extensin domains,
INTERPRO:IPR002965
Length = 847
Score = 28.7 bits (61), Expect = 3.9
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQNNYAPPQNSYYPQN-TYAPP 272
PP + P +PP P P+ + P +++PP Y P T++PP
Sbjct: 596 PPPVFSPPPPVFSPPPP-SPVYSPPPPSHSPPPPVYSPPPPTFSPP 640
Score = 27.9 bits (59), Expect = 6.8
Identities = 14/50 (28%), Positives = 24/50 (48%), Gaps = 5/50 (10%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPP-----KPIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
PP+ P +++PP P P+ + P + PP +S P ++PP
Sbjct: 554 PPVHSPPPPVYSSPPPPHVYSPPPPVASPPPPSPPPPVHSPPPPPVFSPP 603
>At1g31750.1 68414.m03895 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 176
Score = 28.7 bits (61), Expect = 3.9
Identities = 14/40 (35%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Frame = +3
Query: 156 PQNTWNAPPK-PIQPINTYPQNNYAPPQNSYYPQNTYAPP 272
P + PP+ P YP Y PP + YP Y PP
Sbjct: 25 PPGAYPPPPQGAYPPPGGYPPQGYPPPPHG-YPPAAYPPP 63
>At1g09070.1 68414.m01012 C2 domain-containing protein / src2-like
protein, putative similar to cold-regulated gene SRC2
[Glycine max] GI:2055230; contains Pfam profile PF00168:
C2 domain; identical to cDNA src2-like protein
GI:3426059
Length = 324
Score = 28.7 bits (61), Expect = 3.9
Identities = 18/44 (40%), Positives = 20/44 (45%), Gaps = 2/44 (4%)
Frame = +3
Query: 150 WKPQNTWNAPPKPIQPINTYPQNNYAPPQNSY-YP-QNTYAPPQ 275
+ PQ P P Q YPQ Y PPQ Y YP Q + PQ
Sbjct: 230 YPPQQQGGYPGYPPQGPYGYPQQGY-PPQGPYGYPQQQAHGKPQ 272
>At3g59710.1 68416.m06662 short-chain dehydrogenase/reductase (SDR)
family protein contains INTERPRO family IPR002198 short
chain dehydrogenase/reductase SDR family
Length = 302
Score = 28.3 bits (60), Expect = 5.2
Identities = 15/37 (40%), Positives = 18/37 (48%)
Frame = +2
Query: 185 ADPADKHLSPKQLRPPSKLILSSEYLCTSSKHLXSHL 295
AD A ++ L PP KL Y+C SK L S L
Sbjct: 266 ADEAAAIVAKLVLLPPEKLATGKFYICVESKKLISKL 302
>At4g26750.1 68417.m03854 hydroxyproline-rich glycoprotein family
protein
Length = 421
Score = 27.9 bits (59), Expect = 6.8
Identities = 12/26 (46%), Positives = 14/26 (53%)
Frame = +3
Query: 195 PINTYPQNNYAPPQNSYYPQNTYAPP 272
P N YP + PP S YP N + PP
Sbjct: 223 PTNDYPAD-VPPPPPSSYPSNDHLPP 247
>At1g21670.1 68414.m02712 expressed protein similar to TolB protein
precursor (SP:P50601) {Pseudomonas aeruginosa}
Length = 703
Score = 27.9 bits (59), Expect = 6.8
Identities = 11/29 (37%), Positives = 18/29 (62%)
Frame = +3
Query: 390 EYQIXDGTHVXEEGYFTNPNTEEASLVKK 476
E+++ DG + GYF +P+T SL+ K
Sbjct: 63 EHRLTDGKSINFNGYFASPSTALISLLPK 91
>At4g14070.1 68417.m02172 AMP-binding protein, putative similar to
AMP-binding protein [gi:1617272] from Brassica napus;
contains Pfam AMP-binding enzyme domain PF00501;
identical to cDNA acyl-CoA synthetase-like protein
GI:20799730
Length = 727
Score = 27.5 bits (58), Expect = 9.0
Identities = 11/27 (40%), Positives = 18/27 (66%)
Frame = +3
Query: 426 EGYFTNPNTEEASLVKKGWYSYTGADG 506
+GY+ NP+T + L + GW++ TG G
Sbjct: 555 KGYYKNPSTTKQVLNESGWFN-TGDTG 580
>At2g41420.1 68415.m05111 proline-rich family protein contains
proline rich extensin domains, INTERPRO:IPR002965
Length = 98
Score = 27.5 bits (58), Expect = 9.0
Identities = 14/36 (38%), Positives = 19/36 (52%)
Frame = +3
Query: 168 WNAPPKPIQPINTYPQNNYAPPQNSYYPQNTYAPPQ 275
+N PP + P YP Y P+++Y PQ PPQ
Sbjct: 4 YNQPPVGVPPPQGYPPEGY--PKDAYPPQG--YPPQ 35
>At1g54970.1 68414.m06278 proline-rich family protein similar to
proline-rich protein GI:170048 from [Glycine max]
Length = 335
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/46 (34%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
Frame = +3
Query: 138 PPIQWKPQNTWNAPPKPIQPINTYPQN-NYAPPQNSYYPQNTYAPP 272
PP+ +KP + KP P Y ++ +Y+PP + P+ TY PP
Sbjct: 159 PPV-YKPTLSPPVYTKPTLPPPVYKKSPSYSPPP-PFAPKPTYTPP 202
>At1g54170.1 68414.m06175 ataxin-2-related similar to SCA2
(GI:1770390) [Homo sapiens]; similar to ataxin-2
(GI:3005020) [Mus musculus]
Length = 587
Score = 27.5 bits (58), Expect = 9.0
Identities = 16/57 (28%), Positives = 24/57 (42%)
Frame = -2
Query: 315 SDMKACSRWDXRCFEEVHRYSEDSMSFEGGRNCFGDKCLSAGSAWVERSTYFEVSTG 145
S + A +R+D C+E+ ED + FGD S G ++E S G
Sbjct: 271 SSVCATNRFDDTCYEDDEEEEEDILLDCCNNLTFGDSSASDGKEPASTGKFYEDSWG 327
Database: arabidopsis
Posted date: Oct 4, 2007 10:56 AM
Number of letters in database: 12,070,560
Number of sequences in database: 28,952
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,168,746
Number of Sequences: 28952
Number of extensions: 314657
Number of successful extensions: 1301
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 1001
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1231
length of database: 12,070,560
effective HSP length: 79
effective length of database: 9,783,352
effective search space used: 1496852856
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -