Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0045
         (603 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory recept...    28   0.053
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   2.0  
AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory recept...    22   4.6  
AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory recept...    22   4.6  

>AM292364-1|CAL23176.2|  353|Tribolium castaneum gustatory receptor
           candidate 43 protein.
          Length = 353

 Score = 28.3 bits (60), Expect = 0.053
 Identities = 15/56 (26%), Positives = 27/56 (48%)
 Frame = +3

Query: 402 YAGYGIXSLNNIVHRIGNSIISFFFFLKLQYFQDYVXXFTVYQLXILFXVXMNVNR 569
           +  YG+  + +I  +   S+  F     ++YFQ+Y+  F  YQL +     M + R
Sbjct: 124 HLAYGVVIIYSICVQTEKSVFDFLCRHTVEYFQNYIHFF--YQLLLYLITDMILMR 177


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 2.0
 Identities = 10/28 (35%), Positives = 15/28 (53%)
 Frame = +3

Query: 459 IISFFFFLKLQYFQDYVXXFTVYQLXIL 542
           ++  FF L + YF      FTV+ L +L
Sbjct: 137 VVPLFFLLCIYYFYCAFIIFTVHLLFLL 164


>AM292380-1|CAL23192.2|  489|Tribolium castaneum gustatory receptor
           candidate 59 protein.
          Length = 489

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 53  SLYFAIFSYTY 21
           SLYF IF Y Y
Sbjct: 256 SLYFCIFGYIY 266


>AM292346-1|CAL23158.2|  314|Tribolium castaneum gustatory receptor
           candidate 25 protein.
          Length = 314

 Score = 21.8 bits (44), Expect = 4.6
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = -2

Query: 53  SLYFAIFSYTY 21
           SLYF IF Y Y
Sbjct: 81  SLYFCIFGYIY 91


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 97,967
Number of Sequences: 336
Number of extensions: 1534
Number of successful extensions: 5
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 54
effective length of database: 104,441
effective search space used: 15248386
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)