Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0045
(603 letters)
Database: nematostella
59,808 sequences; 16,821,457 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SB_16928| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 2.2
SB_41630| Best HMM Match : Atracotoxin (HMM E-Value=5.8) 29 3.8
SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_22304| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7) 29 3.8
SB_264| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_54298| Best HMM Match : Keratin_B2 (HMM E-Value=5) 29 3.8
SB_52550| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_46196| Best HMM Match : DUF1029 (HMM E-Value=3.6) 29 3.8
SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.) 29 3.8
SB_25739| Best HMM Match : Atracotoxin (HMM E-Value=5.8) 29 3.8
SB_21565| Best HMM Match : Atracotoxin (HMM E-Value=5.8) 29 3.8
SB_13345| Best HMM Match : Hormone_4 (HMM E-Value=3.9) 29 3.8
SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05) 28 5.1
SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4) 28 5.1
SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.) 28 5.1
SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16) 28 6.7
SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.) 27 8.8
>SB_16928| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 29.5 bits (63), Expect = 2.2
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 114 NCGAFYVYQLPKTPVCWLRYCGNRVSLPP 142
>SB_41630| Best HMM Match : Atracotoxin (HMM E-Value=5.8)
Length = 312
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 114 NCGAFYVYQLPKTPVCWLRY 133
>SB_22307| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 713
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 123 NCGAFYVYQLPKTPVCWLRY 142
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 354 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 382
>SB_22304| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 374
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 144 NCGAFYVYQLPKTPVCWLRY 163
>SB_17051| Best HMM Match : Keratin_B2 (HMM E-Value=4.7)
Length = 252
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 93 NCGAFYVYQLPKTPVCWLRY 112
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 220 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 248
>SB_264| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 124
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 99 NCGAFYVYQLPKTPVCWLRY 118
>SB_54298| Best HMM Match : Keratin_B2 (HMM E-Value=5)
Length = 244
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 93 NCGAFYVYQLPKTPVCWLRY 112
>SB_52550| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 297
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 123 NCGAFYVYQLPKTPVCWLRY 142
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 255 NCGAFYVYQLPKTPVCWLRY 274
>SB_46196| Best HMM Match : DUF1029 (HMM E-Value=3.6)
Length = 448
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 144 NCGAFYVYQLPKTPVCWLRY 163
>SB_29619| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 745
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 93 NCGAFYVYQLPKTPVCWLRY 112
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 220 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 248
>SB_25739| Best HMM Match : Atracotoxin (HMM E-Value=5.8)
Length = 143
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 114 NCGAFYVYQLPKTPVCWLRY 133
>SB_21565| Best HMM Match : Atracotoxin (HMM E-Value=5.8)
Length = 304
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 135 NCGAFYVYQLPKTPVCWLRY 154
>SB_13345| Best HMM Match : Hormone_4 (HMM E-Value=3.9)
Length = 448
Score = 28.7 bits (61), Expect = 3.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 114 NCGAFYVYQLPKTPVCWLRY 133
>SB_51984| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 99 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 127
>SB_45873| Best HMM Match : COesterase (HMM E-Value=3.2e-05)
Length = 452
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 420 NCGGFYVYQLPKTPVCWLRYCGNRGSLPP 448
>SB_30048| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 99 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 127
>SB_14587| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 86
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 54 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 82
>SB_1187| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 146
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 114 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 142
>SB_42248| Best HMM Match : Keratin_B2 (HMM E-Value=4.4)
Length = 736
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 363 NCGGFYVYQLPKTPVCWLRYCGNRGSLPP 391
>SB_34937| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 131
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 99 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 127
>SB_7165| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 218
Score = 28.3 bits (60), Expect = 5.1
Identities = 10/29 (34%), Positives = 16/29 (55%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRHXFAE*HCPP 445
NC +++Y L + +CWLR+ PP
Sbjct: 144 NCGGFYVYQLPKTPVCWLRYCGNRVSLPP 172
>SB_21488| Best HMM Match : WD40 (HMM E-Value=3.5e-16)
Length = 675
Score = 27.9 bits (59), Expect = 6.7
Identities = 13/55 (23%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = -3
Query: 169 AKXDXNYSGQKETLRXIITEQLGYKFKKCKNARVILIQKAYISLYSH--IPMYNI 11
A+ D G+ E + + T GY+ K C+N V++ + ++ ++ + +YN+
Sbjct: 110 ARLDLREYGELEDISLLDTRGYGYRGKDCRNNLVVVNETGELAYFTAAIVVLYNL 164
>SB_13346| Best HMM Match : No HMM Matches (HMM E-Value=.)
Length = 144
Score = 27.5 bits (58), Expect = 8.8
Identities = 8/20 (40%), Positives = 14/20 (70%)
Frame = +2
Query: 359 NCLIYFLYSLASSXICWLRH 418
NC +++Y L + +CWLR+
Sbjct: 120 NCGGFYVYQLPKTPVCWLRY 139
Database: nematostella
Posted date: Oct 22, 2007 1:22 PM
Number of letters in database: 16,821,457
Number of sequences in database: 59,808
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,665,077
Number of Sequences: 59808
Number of extensions: 153017
Number of successful extensions: 241
Number of sequences better than 10.0: 23
Number of HSP's better than 10.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 241
length of database: 16,821,457
effective HSP length: 79
effective length of database: 12,096,625
effective search space used: 1463691625
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -