Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0043
         (750 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    27   0.62 
DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.        27   0.82 
AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive ...    27   0.82 
DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative methopren...    23   7.6  

>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 27.1 bits (57), Expect = 0.62
 Identities = 14/37 (37%), Positives = 20/37 (54%)
 Frame = +3

Query: 567 IERGCNFTNKIFHICLLAREYHGRASYYFGPPGTGKS 677
           IER  N+  K +   ++   +H R S   GP G+GKS
Sbjct: 72  IERITNYNFKSYAGHVMLGPFHQRFSSIIGPNGSGKS 108


>DQ974161-1|ABJ52801.1|  409|Anopheles gambiae serpin 2 protein.
          Length = 409

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 681 VWTYQYQGVQNNKMPFHG 628
           +WTY +  V NN  PF+G
Sbjct: 200 LWTYPFPEVANNVKPFYG 217


>AF203339-1|AAF19834.1|  156|Anopheles gambiae immune-responsive
           serpin-related proteinISerpF1 protein.
          Length = 156

 Score = 26.6 bits (56), Expect = 0.82
 Identities = 9/18 (50%), Positives = 12/18 (66%)
 Frame = -1

Query: 681 VWTYQYQGVQNNKMPFHG 628
           +WTY +  V NN  PF+G
Sbjct: 101 LWTYPFPEVANNVKPFYG 118


>DQ303468-1|ABC18327.1| 1115|Anopheles gambiae putative
           methoprene-tolerant protein protein.
          Length = 1115

 Score = 23.4 bits (48), Expect = 7.6
 Identities = 11/20 (55%), Positives = 13/20 (65%), Gaps = 3/20 (15%)
 Frame = +3

Query: 636 RASYYFGPP---GTGKSILG 686
           R++YY GPP   GTG   LG
Sbjct: 24  RSAYYGGPPEIGGTGAGALG 43


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 646,925
Number of Sequences: 2352
Number of extensions: 11646
Number of successful extensions: 24
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 77339358
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)