Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= brP-0043
(750 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sortin... 148 2e-35
AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sortin... 148 2e-35
AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sortin... 148 2e-35
AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein. 148 2e-35
AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein. 148 2e-35
AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protei... 144 2e-34
BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sortin... 132 2e-30
AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing... 132 2e-30
AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sortin... 132 2e-30
AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein. 132 2e-30
AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein. 128 2e-29
BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein. 105 1e-22
BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein. 42 0.002
AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein. 42 0.002
BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein. 40 0.010
AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein. 40 0.010
BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6 ki... 39 0.017
AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6 ki... 39 0.017
AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens ... 39 0.017
AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein. 39 0.017
AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein. 38 0.051
BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-l... 33 1.1
BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein. 30 7.7
AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein. 30 7.7
AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein. 30 7.7
AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein. 30 7.7
>BC047932-1|AAH47932.1| 437|Homo sapiens vacuolar protein sorting 4
homolog A (S. cerevisiae) protein.
Length = 437
Score = 148 bits (359), Expect = 2e-35
Identities = 84/181 (46%), Positives = 101/181 (55%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP+++W+DV G VILPIKF + G +++ P YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191
>AF282903-1|AAG01470.1| 437|Homo sapiens vacuolar protein sorting
factor 4A protein.
Length = 437
Score = 148 bits (359), Expect = 2e-35
Identities = 84/181 (46%), Positives = 101/181 (55%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP+++W+DV G VILPIKF + G +++ P YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191
>AF255952-1|AAK52408.1| 437|Homo sapiens vacuolar protein sorting
VPS4-1 protein.
Length = 437
Score = 148 bits (359), Expect = 2e-35
Identities = 84/181 (46%), Positives = 101/181 (55%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP+++W+DV G VILPIKF + G +++ P YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191
>AF159063-1|AAD49227.1| 437|Homo sapiens SKD1-homolog protein.
Length = 437
Score = 148 bits (359), Expect = 2e-35
Identities = 84/181 (46%), Positives = 101/181 (55%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP+++W+DV G VILPIKF + G +++ P YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191
>AF112215-1|AAF17203.1| 437|Homo sapiens SKD1 protein protein.
Length = 437
Score = 148 bits (359), Expect = 2e-35
Identities = 84/181 (46%), Positives = 101/181 (55%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP+++W+DV G VILPIKF + G +++ P YLAK
Sbjct: 120 EKPNIRWNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 149 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 191
>AF155740-1|AAD42971.1| 432|Homo sapiens vacuolar sorting protein 4
protein.
Length = 432
Score = 144 bits (350), Expect = 2e-34
Identities = 80/175 (45%), Positives = 96/175 (54%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
LQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAKC+QYLD
Sbjct: 1 LQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAKCVQYLD 60
Query: 349 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 528
RA LQ +L GA+V+EKP+++
Sbjct: 61 RAEKLKDYLRSKEKHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVMEKPNIR 120
Query: 529 WSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAKA 693
W+DV G VILPIKF + G +++ P YLAKA
Sbjct: 121 WNDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKSYLAKA 174
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 144 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 186
>BC039574-1|AAH39574.1| 444|Homo sapiens vacuolar protein sorting 4
homolog B (S. cerevisiae) protein.
Length = 444
Score = 132 bits (318), Expect = 2e-30
Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Frame = +1
Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
AIV+E+P+VKWSDV G VILPIKF + G +++ P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181
Query: 679 YLAKA 693
YLAKA
Sbjct: 182 YLAKA 186
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198
>AY232629-1|AAP59551.1| 444|Homo sapiens cell migration-inducing 1
protein.
Length = 444
Score = 132 bits (318), Expect = 2e-30
Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Frame = +1
Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
AIV+E+P+VKWSDV G VILPIKF + G +++ P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181
Query: 679 YLAKA 693
YLAKA
Sbjct: 182 YLAKA 186
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198
>AF282904-1|AAG01471.1| 444|Homo sapiens vacuolar protein sorting
factor 4B protein.
Length = 444
Score = 132 bits (318), Expect = 2e-30
Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Frame = +1
Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
AIV+E+P+VKWSDV G VILPIKF + G +++ P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181
Query: 679 YLAKA 693
YLAKA
Sbjct: 182 YLAKA 186
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198
>AF195514-1|AAG33022.1| 444|Homo sapiens VPS4-2 ATPase protein.
Length = 444
Score = 132 bits (318), Expect = 2e-30
Identities = 77/185 (41%), Positives = 97/185 (52%), Gaps = 5/185 (2%)
Frame = +1
Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 334 LQYLDRA-----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEG 498
+YLDRA LQ +L+G
Sbjct: 63 TEYLDRAEKLKEYLKNKEKKAQKPVKEGQPSPADEKGNDSDGEGESDDPEKKKLQNQLQG 122
Query: 499 AIVVEKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSP 678
AIV+E+P+VKWSDV G VILPIKF + G +++ P
Sbjct: 123 AIVIERPNVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRG-ILLFGPPGTGKS 181
Query: 679 YLAKA 693
YLAKA
Sbjct: 182 YLAKA 186
Score = 56.4 bits (130), Expect = 1e-07
Identities = 28/44 (63%), Positives = 32/44 (72%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGKR PW+GILLF P + + + ATEANNSTFFS
Sbjct: 156 FPHLFTGKRTPWRGILLFGPPGTGKSYLAKAV-ATEANNSTFFS 198
>AF132747-1|AAL75948.1| 437|Homo sapiens SKD2 protein protein.
Length = 437
Score = 128 bits (310), Expect = 2e-29
Identities = 82/181 (45%), Positives = 95/181 (52%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT+S TLQKAIDLVTKATEEDK KNYEEALRLY+H VEYFLHA+KYEA ++AKESIRAK
Sbjct: 1 MTTS-TLQKAIDLVTKATEEDKAKNYEEALRLYQHAVEYFLHAIKYEAHSDKAKESIRAK 59
Query: 331 CLQYLDRAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVV 510
C+QYLDRA LQ +L GA+V+
Sbjct: 60 CVQYLDRAEKLKDYLRSKEEHGKKPVKENQSEGKGSDSDSEGDNPEKKKLQEQLMGAVVM 119
Query: 511 EKPHVKWSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAK 690
EKP VILPIKF + + G+L+ P S YLAK
Sbjct: 120 EKPQHTVERRGRAGGAKEALKEAVILPIKFPHLFTGKTHPGGGYLLFGPPGTGKS-YLAK 178
Query: 691 A 693
A
Sbjct: 179 A 179
Score = 41.9 bits (94), Expect = 0.002
Identities = 24/44 (54%), Positives = 27/44 (61%)
Frame = +2
Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
FPHLFTGK P G LLF P + + + ATEA NSTFFS
Sbjct: 149 FPHLFTGKTHPGGGYLLFGPPGTGKSYLAKAV-ATEATNSTFFS 191
>BC009692-1|AAH09692.1| 81|Homo sapiens VPS4B protein protein.
Length = 81
Score = 105 bits (253), Expect = 1e-22
Identities = 47/67 (70%), Positives = 58/67 (86%)
Frame = +1
Query: 154 TSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKC 333
++S LQKAIDL +KA +EDK NYEEAL+LY+H V+YFLH VKYEAQG++AK+SIRAKC
Sbjct: 3 STSPNLQKAIDLASKAAQEDKAGNYEEALQLYQHAVQYFLHVVKYEAQGDKAKQSIRAKC 62
Query: 334 LQYLDRA 354
+YLDRA
Sbjct: 63 TEYLDRA 69
>BC004540-1|AAH04540.1| 541|Homo sapiens RPS6KL1 protein protein.
Length = 541
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 331 CLQYLDRA 354
+YL RA
Sbjct: 103 ITKYLRRA 110
>AC006530-3|AAD30182.1| 549|Homo sapiens unknown protein.
Length = 549
Score = 41.9 bits (94), Expect = 0.002
Identities = 22/68 (32%), Positives = 37/68 (54%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT + L A + A E D +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERDVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 331 CLQYLDRA 354
+YL RA
Sbjct: 103 ITKYLRRA 110
>BC056202-1|AAH56202.1| 813|Homo sapiens calpain 7 protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.010
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 349 RA 354
RA
Sbjct: 146 RA 147
>AB028639-1|BAA78730.1| 813|Homo sapiens PalBH protein.
Length = 813
Score = 39.9 bits (89), Expect = 0.010
Identities = 22/62 (35%), Positives = 35/62 (56%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L++A LVT+A +ED+ +N E+A+ LY V+ L YE + + ++ Q LD
Sbjct: 87 LERAHFLVTQAFDEDEKENVEDAIELYTEAVDLCL-KTSYETADKVLQNKLKQLARQALD 145
Query: 349 RA 354
RA
Sbjct: 146 RA 147
>BC104769-1|AAI04770.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>AL645860-2|CAH70704.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 349 RA 354
RA
Sbjct: 287 RA 288
>AL645860-1|CAH70703.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>AL583826-2|CAH73805.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 349 RA 354
RA
Sbjct: 287 RA 288
>AL583826-1|CAH73804.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>AL512449-2|CAH72000.1| 1054|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1054
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 228 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 286
Query: 349 RA 354
RA
Sbjct: 287 RA 288
>AL512449-1|CAH71999.1| 1066|Homo sapiens ribosomal protein S6
kinase, 52kDa, polypeptide 1 protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>AK054800-1|BAB70808.1| 255|Homo sapiens protein ( Homo sapiens
cDNA FLJ30238 fis, clone BRACE2002050. ).
Length = 255
Score = 39.1 bits (87), Expect = 0.017
Identities = 21/68 (30%), Positives = 36/68 (52%)
Frame = +1
Query: 151 MTSSNTLQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAK 330
MT + L A + A E +++YE A Y++GV+ L + + ER +E+++ K
Sbjct: 44 MTKRDYLVDAATQIRLALERGVSEDYEAAFNHYQNGVDVLLRGIHVDPNKER-REAVKLK 102
Query: 331 CLQYLDRA 354
+YL RA
Sbjct: 103 ITKYLRRA 110
>AF477978-1|AAL84818.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 39.1 bits (87), Expect = 0.017
Identities = 20/62 (32%), Positives = 37/62 (59%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ A ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLALKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>AB070706-1|BAB63956.1| 1066|Homo sapiens RSK-like protein protein.
Length = 1066
Score = 37.5 bits (83), Expect = 0.051
Identities = 19/62 (30%), Positives = 36/62 (58%)
Frame = +1
Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
L+KA +L+ ++++ +YE A Y GV+ L V+ E+ R +E+++ + +YL
Sbjct: 240 LEKAGELIKLVLKKEEEDDYEAASDFYRKGVDLLLEGVQGESSPTR-REAVKRRTAEYLM 298
Query: 349 RA 354
RA
Sbjct: 299 RA 300
>BC034999-1|AAH34999.2| 466|Homo sapiens katanin p60 subunit A-like
2 protein.
Length = 466
Score = 33.1 bits (72), Expect = 1.1
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = +2
Query: 587 YQ*NFPHLFTGKRIPWKGILLFWTP 661
Y +P LFTG PWKG+LL+ P
Sbjct: 200 YPIRYPQLFTGILSPWKGLLLYGPP 224
>BC150260-1|AAI50261.1| 584|Homo sapiens spastin protein.
Length = 584
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
P LFTG R P +G+LLF P T +N+TFF+
Sbjct: 333 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 373
>AJ246003-1|CAB60208.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
P LFTG R P +G+LLF P T +N+TFF+
Sbjct: 365 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 405
>AJ246001-1|CAB60141.1| 616|Homo sapiens spastin protein protein.
Length = 616
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
P LFTG R P +G+LLF P T +N+TFF+
Sbjct: 365 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 405
>AB029006-1|BAA83035.1| 584|Homo sapiens KIAA1083 protein protein.
Length = 584
Score = 30.3 bits (65), Expect = 7.7
Identities = 17/43 (39%), Positives = 22/43 (51%)
Frame = +2
Query: 602 PHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
P LFTG R P +G+LLF P T +N+TFF+
Sbjct: 333 PELFTGLRAPARGLLLFGPPGNG--KTMLAKAVAAESNATFFN 373
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 90,854,619
Number of Sequences: 237096
Number of extensions: 1736459
Number of successful extensions: 3753
Number of sequences better than 10.0: 31
Number of HSP's better than 10.0 without gapping: 3563
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3720
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 9015132854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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