Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= brP-0043
         (750 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to ye...   111   5e-25
CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical ...    31   0.87 
U64852-4|AAB04967.1|  192|Caenorhabditis elegans Galectin protei...    29   2.7  
AB038501-1|BAB11966.1|  192|Caenorhabditis elegans galectin LEC-...    29   2.7  
Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical pr...    29   3.5  
Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical pr...    29   3.5  
U55369-2|AAK52183.2|  526|Caenorhabditis elegans Udp-glucuronosy...    29   4.7  
U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical pr...    28   6.2  
AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical ...    28   6.2  
Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical pr...    28   8.1  

>AC024756-9|AAK29883.4|  430|Caenorhabditis elegans Related to yeast
           vacuolar proteinsorting factor protein 4 protein.
          Length = 430

 Score =  111 bits (267), Expect = 5e-25
 Identities = 67/175 (38%), Positives = 88/175 (50%)
 Frame = +1

Query: 169 LQKAIDLVTKATEEDKNKNYEEALRLYEHGVEYFLHAVKYEAQGERAKESIRAKCLQYLD 348
           LQKAI+LVTKATEED    Y++ALRLY+  +EYFLHA+KYE+QG++ + +IR K  QYL+
Sbjct: 6   LQKAIELVTKATEEDTAGRYDQALRLYDQAIEYFLHAIKYESQGDKQRNAIRDKVGQYLN 65

Query: 349 RAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLQGKLEGAIVVEKPHVK 528
           RA                                          Q KL GAIV+EKP+VK
Sbjct: 66  RA---------EQIKTHLKDGKTQKKPVKDGKDDSDEDEDKKKFQDKLSGAIVMEKPNVK 116

Query: 529 WSDVXGXXXXXXXXXXXVILPIKFSTFVYWQENTMEGHLIILDPLVLVSPYLAKA 693
           W+D+ G           VILPIKF           +G +++  P      Y+AKA
Sbjct: 117 WTDIAGLEGAKEALKEAVILPIKFPQLFTGNRKPWQG-ILLFGPPGTGKSYIAKA 170



 Score = 45.2 bits (102), Expect = 5e-05
 Identities = 24/44 (54%), Positives = 28/44 (63%)
 Frame = +2

Query: 599 FPHLFTGKRIPWKGILLFWTPWYW*VHTWQRLGATEANNSTFFS 730
           FP LFTG R PW+GILLF  P     +  + + ATEA  STFFS
Sbjct: 140 FPQLFTGNRKPWQGILLFGPPGTGKSYIAKAV-ATEAGESTFFS 182


>CU457740-9|CAM36339.1|  357|Caenorhabditis elegans Hypothetical
           protein C50E10.9 protein.
          Length = 357

 Score = 31.1 bits (67), Expect = 0.87
 Identities = 26/90 (28%), Positives = 39/90 (43%), Gaps = 1/90 (1%)
 Frame = -3

Query: 364 LIFQLYQDIEGILHEYFLLPFHLGPHILLHEENTLHHAHINVMLLHSFCSCPL-Q*P**Q 188
           LIFQL Q +E +   Y L  + +G   L  +    HH   + +      SC L + P   
Sbjct: 67  LIFQLCQWLEILCARYLLFDYLIGYKFLGDKSKIYHHFWTDKLEEMVQISCFLEEWPLFL 126

Query: 187 DQ*LFVRYLMMSLFFKFTTTKVQKIAQLYL 98
              L+  +    LFF F+ +  + IA  YL
Sbjct: 127 GGFLYTHHFASCLFFLFSVSMERAIASYYL 156


>U64852-4|AAB04967.1|  192|Caenorhabditis elegans Galectin protein
           10 protein.
          Length = 192

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 325 HEYFLLPFHLGPHILLHEENTLHHAHINVM 236
           H+ F +    GP+++LH     HH H+ VM
Sbjct: 36  HKNFAVELLSGPNVVLHVNFRFHHEHVVVM 65


>AB038501-1|BAB11966.1|  192|Caenorhabditis elegans galectin LEC-10
           protein.
          Length = 192

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = -3

Query: 325 HEYFLLPFHLGPHILLHEENTLHHAHINVM 236
           H+ F +    GP+++LH     HH H+ VM
Sbjct: 36  HKNFAVELLSGPNVVLHVNFRFHHEHVVVM 65


>Z96100-7|CAB09531.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 630 HGRASYYFGPPGTGKSILGKGWG 698
           H R    FGPPGTGK+++ +  G
Sbjct: 329 HVRGILLFGPPGTGKTLMARQIG 351


>Z79698-2|CAB01976.1|  824|Caenorhabditis elegans Hypothetical
           protein H15N14.2a protein.
          Length = 824

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 630 HGRASYYFGPPGTGKSILGKGWG 698
           H R    FGPPGTGK+++ +  G
Sbjct: 329 HVRGILLFGPPGTGKTLMARQIG 351


>Z79698-1|CAL44963.1|  758|Caenorhabditis elegans Hypothetical
           protein H15N14.2b protein.
          Length = 758

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 11/23 (47%), Positives = 15/23 (65%)
 Frame = +3

Query: 630 HGRASYYFGPPGTGKSILGKGWG 698
           H R    FGPPGTGK+++ +  G
Sbjct: 263 HVRGILLFGPPGTGKTLMARQIG 285


>U55369-2|AAK52183.2|  526|Caenorhabditis elegans
           Udp-glucuronosyltransferase protein48 protein.
          Length = 526

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 645 YYFGPPGTGKSILGKGWGLLKQTIQ 719
           + F  P  G+S+  KGWG+L+   Q
Sbjct: 394 FMFDQPRNGRSVERKGWGILRDRFQ 418


>U53149-2|AAM29664.1|  451|Caenorhabditis elegans Hypothetical
           protein C24B5.2a protein.
          Length = 451

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/20 (65%), Positives = 14/20 (70%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTP 661
           P+LF G R P KGILLF  P
Sbjct: 201 PNLFKGLRQPVKGILLFGPP 220


>AF016427-1|AAB65351.1|  594|Caenorhabditis elegans Hypothetical
           protein F32D1.1 protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/20 (60%), Positives = 14/20 (70%)
 Frame = +2

Query: 602 PHLFTGKRIPWKGILLFWTP 661
           P +FTG R P KG+LLF  P
Sbjct: 339 PDVFTGIRAPPKGVLLFGPP 358



 Score = 28.3 bits (60), Expect = 6.2
 Identities = 9/13 (69%), Positives = 13/13 (100%)
 Frame = +3

Query: 651 FGPPGTGKSILGK 689
           FGPPGTGK+++G+
Sbjct: 355 FGPPGTGKTMIGR 367


>Z82077-5|CAB63333.1|  783|Caenorhabditis elegans Hypothetical
           protein W09C5.7 protein.
          Length = 783

 Score = 27.9 bits (59), Expect = 8.1
 Identities = 14/29 (48%), Positives = 17/29 (58%)
 Frame = +1

Query: 148 TMTSSNTLQKAIDLVTKATEEDKNKNYEE 234
           T T     QKAI++VT  TE D+N   EE
Sbjct: 503 THTKDAQRQKAINIVTGQTEADENAEEEE 531


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,278,205
Number of Sequences: 27780
Number of extensions: 258423
Number of successful extensions: 764
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 724
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 762
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1777507862
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)